Protein–RNA interactions for Protein: Q9NY35

CLDND1, Claudin domain-containing protein 1, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1Q9NY35 MIR548Q-201ENST00000408404 100 ntBASIC-0.53□□□□□ -2.49
CLDND1Q9NY35 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.54□□□□□ -2.5
CLDND1Q9NY35 MIR125B1-201ENST00000385236 88 ntBASIC-0.54□□□□□ -2.5
CLDND1Q9NY35 AL353691.2-201ENST00000443795 59 ntBASIC-0.54□□□□□ -2.5
CLDND1Q9NY35 MIR4490-201ENST00000582647 84 ntBASIC-0.54□□□□□ -2.5
CLDND1Q9NY35 SNORD113-4-201ENST00000364802 75 ntBASIC-0.55□□□□□ -2.5
CLDND1Q9NY35 AP002795.1-201ENST00000534879 84 ntBASIC-0.56□□□□□ -2.5
CLDND1Q9NY35 MIR3170-201ENST00000582699 77 ntBASIC-0.56□□□□□ -2.5
CLDND1Q9NY35 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.58□□□□□ -2.5
CLDND1Q9NY35 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.58□□□□□ -2.5
CLDND1Q9NY35 MT-TQ-201ENST00000387372 72 ntBASIC-0.58□□□□□ -2.5
CLDND1Q9NY35 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
CLDND1Q9NY35 MIR4436A-201ENST00000585278 85 ntBASIC-0.59□□□□□ -2.5
CLDND1Q9NY35 MIR548AZ-201ENST00000616567 95 ntBASIC-0.59□□□□□ -2.5
CLDND1Q9NY35 MIR5683-201ENST00000636514 76 ntBASIC-0.59□□□□□ -2.5
CLDND1Q9NY35 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.6□□□□□ -2.51
CLDND1Q9NY35 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.61□□□□□ -2.51
CLDND1Q9NY35 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.61□□□□□ -2.51
CLDND1Q9NY35 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.62□□□□□ -2.51
CLDND1Q9NY35 RNU6-828P-201ENST00000364876 107 ntBASIC-0.63□□□□□ -2.51
CLDND1Q9NY35 MIR520D-201ENST00000385002 87 ntBASIC-0.63□□□□□ -2.51
CLDND1Q9NY35 RNU6-247P-201ENST00000362636 107 ntBASIC-0.64□□□□□ -2.51
CLDND1Q9NY35 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.66□□□□□ -2.52
CLDND1Q9NY35 MTND4LP19-201ENST00000403051 166 ntBASIC-0.66□□□□□ -2.52
CLDND1Q9NY35 RNU6-614P-201ENST00000384369 107 ntBASIC-0.67□□□□□ -2.52
CLDND1Q9NY35 SNORD63.2-201ENST00000516303 64 ntBASIC-0.67□□□□□ -2.52
CLDND1Q9NY35 U6.59-201ENST00000615686 107 ntBASIC-0.67□□□□□ -2.52
CLDND1Q9NY35 MIR147A-201ENST00000385079 72 ntBASIC-0.69□□□□□ -2.52
CLDND1Q9NY35 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.69□□□□□ -2.52
CLDND1Q9NY35 RNU6-974P-201ENST00000384099 108 ntBASIC-0.7□□□□□ -2.52
CLDND1Q9NY35 RNU6-419P-201ENST00000517030 63 ntBASIC-0.7□□□□□ -2.52
CLDND1Q9NY35 RNU6-258P-201ENST00000390884 101 ntBASIC-0.71□□□□□ -2.52
CLDND1Q9NY35 MIR548X-201ENST00000580069 75 ntBASIC-0.71□□□□□ -2.52
CLDND1Q9NY35 RNU6-431P-201ENST00000383874 107 ntBASIC-0.72□□□□□ -2.52
CLDND1Q9NY35 RNU6-608P-201ENST00000383927 104 ntBASIC-0.72□□□□□ -2.52
CLDND1Q9NY35 MIR507-201ENST00000385234 94 ntBASIC-0.72□□□□□ -2.52
CLDND1Q9NY35 MIR601-201ENST00000385256 79 ntBASIC-0.72□□□□□ -2.52
CLDND1Q9NY35 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.73□□□□□ -2.53
CLDND1Q9NY35 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
CLDND1Q9NY35 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.73□□□□□ -2.53
CLDND1Q9NY35 MIR3681-201ENST00000580089 72 ntBASIC-0.73□□□□□ -2.53
CLDND1Q9NY35 SNORD64-201ENST00000386683 67 ntBASIC-0.74□□□□□ -2.53
CLDND1Q9NY35 MIR198-201ENST00000637333 62 ntBASIC-0.74□□□□□ -2.53
CLDND1Q9NY35 SNORD114-25-201ENST00000363742 72 ntBASIC-0.76□□□□□ -2.53
CLDND1Q9NY35 MIR587-201ENST00000384845 96 ntBASIC-0.76□□□□□ -2.53
CLDND1Q9NY35 RPL35AP4-201ENST00000412007 102 ntBASIC-0.76□□□□□ -2.53
CLDND1Q9NY35 SNORA27.2-201ENST00000363365 126 ntBASIC-0.77□□□□□ -2.53
CLDND1Q9NY35 AL451105.1-201ENST00000450005 189 ntBASIC-0.77□□□□□ -2.53
CLDND1Q9NY35 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.78□□□□□ -2.53
CLDND1Q9NY35 RNU6-980P-201ENST00000516925 103 ntBASIC-0.78□□□□□ -2.53
CLDND1Q9NY35 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.79□□□□□ -2.54
CLDND1Q9NY35 MIR4320-201ENST00000636981 65 ntBASIC-0.8□□□□□ -2.54
CLDND1Q9NY35 RNA5SP26-201ENST00000362406 119 ntBASIC-0.81□□□□□ -2.54
CLDND1Q9NY35 RNU4-33P-201ENST00000364316 85 ntBASIC-0.82□□□□□ -2.54
CLDND1Q9NY35 RNU6-936P-201ENST00000384005 107 ntBASIC-0.82□□□□□ -2.54
CLDND1Q9NY35 SNORD45.2-201ENST00000363552 72 ntBASIC-0.83□□□□□ -2.54
CLDND1Q9NY35 snoU83B.1-201ENST00000517136 88 ntBASIC-0.83□□□□□ -2.54
CLDND1Q9NY35 Y_RNA.722-201ENST00000517279 114 ntBASIC-0.83□□□□□ -2.54
CLDND1Q9NY35 MIR382-201ENST00000637119 76 ntBASIC-0.83□□□□□ -2.54
CLDND1Q9NY35 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.85□□□□□ -2.55
CLDND1Q9NY35 U4.2-201ENST00000618561 85 ntBASIC-0.85□□□□□ -2.55
CLDND1Q9NY35 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.86□□□□□ -2.55
CLDND1Q9NY35 MIR29B1-201ENST00000385015 81 ntBASIC-0.87□□□□□ -2.55
CLDND1Q9NY35 RNU6-808P-201ENST00000391233 108 ntBASIC-0.87□□□□□ -2.55
CLDND1Q9NY35 AC090616.4-201ENST00000448026 115 ntBASIC-0.87□□□□□ -2.55
CLDND1Q9NY35 RNU6-987P-201ENST00000384759 104 ntBASIC-0.89□□□□□ -2.55
CLDND1Q9NY35 MIR6818-201ENST00000621576 65 ntBASIC-0.89□□□□□ -2.55
CLDND1Q9NY35 AL500527.2-201ENST00000454105 95 ntBASIC-0.9□□□□□ -2.55
CLDND1Q9NY35 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.91□□□□□ -2.56
CLDND1Q9NY35 RNU4-37P-201ENST00000410214 84 ntBASIC-0.91□□□□□ -2.56
CLDND1Q9NY35 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.91□□□□□ -2.56
CLDND1Q9NY35 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.91□□□□□ -2.56
CLDND1Q9NY35 MIR23C-201ENST00000579846 100 ntBASIC-0.91□□□□□ -2.56
CLDND1Q9NY35 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.91□□□□□ -2.56
CLDND1Q9NY35 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.91□□□□□ -2.56
CLDND1Q9NY35 RNU6-530P-201ENST00000391180 107 ntBASIC-0.92□□□□□ -2.56
CLDND1Q9NY35 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.93□□□□□ -2.56
CLDND1Q9NY35 RNU6-10P-201ENST00000384036 107 ntBASIC-0.93□□□□□ -2.56
CLDND1Q9NY35 MIR1207-201ENST00000408249 87 ntBASIC-0.93□□□□□ -2.56
CLDND1Q9NY35 MIR6738-201ENST00000619620 64 ntBASIC-0.94□□□□□ -2.56
CLDND1Q9NY35 MIR196A1-201ENST00000388006 70 ntBASIC-0.96□□□□□ -2.56
CLDND1Q9NY35 RNY3P8-201ENST00000411366 126 ntBASIC-0.96□□□□□ -2.56
CLDND1Q9NY35 RNU6-753P-201ENST00000363926 107 ntBASIC-0.97□□□□□ -2.56
CLDND1Q9NY35 RNU6-141P-201ENST00000410499 105 ntBASIC-0.97□□□□□ -2.56
CLDND1Q9NY35 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.97□□□□□ -2.56
CLDND1Q9NY35 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.98□□□□□ -2.57
CLDND1Q9NY35 RNU7-134P-201ENST00000458997 64 ntBASIC-1.01□□□□□ -2.57
CLDND1Q9NY35 uc_338.19-201ENST00000616808 99 ntBASIC-1.01□□□□□ -2.57
CLDND1Q9NY35 RNU6-361P-201ENST00000364454 107 ntBASIC-1.02□□□□□ -2.57
CLDND1Q9NY35 RNU6-164P-201ENST00000364604 103 ntBASIC-1.02□□□□□ -2.57
CLDND1Q9NY35 SNORD114-3-201ENST00000364969 75 ntBASIC-1.02□□□□□ -2.57
CLDND1Q9NY35 RNU6-576P-201ENST00000390854 102 ntBASIC-1.02□□□□□ -2.57
CLDND1Q9NY35 MIR378F-201ENST00000578143 78 ntBASIC-1.02□□□□□ -2.57
CLDND1Q9NY35 MIR4324-201ENST00000584846 72 ntBASIC-1.02□□□□□ -2.57
CLDND1Q9NY35 AC018880.2-201ENST00000414265 201 ntBASIC-1.03□□□□□ -2.57
CLDND1Q9NY35 MIR202-201ENST00000362219 110 ntBASIC-1.04□□□□□ -2.58
CLDND1Q9NY35 SNORD83B-201ENST00000386745 93 ntBASIC-1.04□□□□□ -2.58
CLDND1Q9NY35 MIR4499-201ENST00000584834 69 ntBASIC-1.04□□□□□ -2.58
CLDND1Q9NY35 SCARNA17-201ENST00000516183 144 ntBASIC-1.05□□□□□ -2.58
CLDND1Q9NY35 AC120024.2-201ENST00000576526 175 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 7.3 ms