Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SNORA25.4-201ENST00000363666 124 ntBASIC-0.98□□□□□ -2.57
NDE1Q9NXR1 MIR4441-201ENST00000582623 100 ntBASIC-0.98□□□□□ -2.57
NDE1Q9NXR1 AC005520.4-201ENST00000604337 90 ntBASIC-0.98□□□□□ -2.57
NDE1Q9NXR1 SNORD60.1-201ENST00000362451 73 ntBASIC-0.99□□□□□ -2.57
NDE1Q9NXR1 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.99□□□□□ -2.57
NDE1Q9NXR1 MIR1285-2-201ENST00000408311 88 ntBASIC-0.99□□□□□ -2.57
NDE1Q9NXR1 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.99□□□□□ -2.57
NDE1Q9NXR1 U6.111-201ENST00000636093 83 ntBASIC-0.99□□□□□ -2.57
NDE1Q9NXR1 MIR4662A-201ENST00000637499 67 ntBASIC-0.99□□□□□ -2.57
NDE1Q9NXR1 RNA5SP26-201ENST00000362406 119 ntBASIC-1□□□□□ -2.57
NDE1Q9NXR1 Y_RNA.55-201ENST00000362797 102 ntBASIC-1□□□□□ -2.57
NDE1Q9NXR1 MIR520D-201ENST00000385002 87 ntBASIC-1□□□□□ -2.57
NDE1Q9NXR1 MIR579-201ENST00000385221 98 ntBASIC-1□□□□□ -2.57
NDE1Q9NXR1 RNU6-172P-201ENST00000411000 93 ntBASIC-1.01□□□□□ -2.57
NDE1Q9NXR1 RNU7-134P-201ENST00000458997 64 ntBASIC-1.01□□□□□ -2.57
NDE1Q9NXR1 MIR548AA1-201ENST00000384971 97 ntBASIC-1.02□□□□□ -2.57
NDE1Q9NXR1 SNORA72.7-201ENST00000516349 94 ntBASIC-1.02□□□□□ -2.57
NDE1Q9NXR1 MIR6818-201ENST00000621576 65 ntBASIC-1.02□□□□□ -2.57
NDE1Q9NXR1 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.02□□□□□ -2.57
NDE1Q9NXR1 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.03□□□□□ -2.57
NDE1Q9NXR1 RNU6-539P-201ENST00000516665 103 ntBASIC-1.03□□□□□ -2.57
NDE1Q9NXR1 RNU7-151P-201ENST00000516930 53 ntBASIC-1.03□□□□□ -2.57
NDE1Q9NXR1 MIR3170-201ENST00000582699 77 ntBASIC-1.04□□□□□ -2.58
NDE1Q9NXR1 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.04□□□□□ -2.58
NDE1Q9NXR1 RNY4P27-201ENST00000363341 96 ntBASIC-1.05□□□□□ -2.58
NDE1Q9NXR1 SNORA25.5-201ENST00000363782 126 ntBASIC-1.05□□□□□ -2.58
NDE1Q9NXR1 RNU6-608P-201ENST00000383927 104 ntBASIC-1.06□□□□□ -2.58
NDE1Q9NXR1 MIR29B1-201ENST00000385015 81 ntBASIC-1.06□□□□□ -2.58
NDE1Q9NXR1 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.06□□□□□ -2.58
NDE1Q9NXR1 RNU6-995P-201ENST00000391244 107 ntBASIC-1.06□□□□□ -2.58
NDE1Q9NXR1 RNU6-247P-201ENST00000362636 107 ntBASIC-1.07□□□□□ -2.58
NDE1Q9NXR1 RNU6-800P-201ENST00000384473 103 ntBASIC-1.07□□□□□ -2.58
NDE1Q9NXR1 AC090616.4-201ENST00000448026 115 ntBASIC-1.07□□□□□ -2.58
NDE1Q9NXR1 MIR4511-201ENST00000582784 87 ntBASIC-1.08□□□□□ -2.58
NDE1Q9NXR1 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.09□□□□□ -2.58
NDE1Q9NXR1 MIR7978-201ENST00000636158 59 ntBASIC-1.09□□□□□ -2.58
NDE1Q9NXR1 RNU6-122P-201ENST00000516818 107 ntBASIC-1.1□□□□□ -2.59
NDE1Q9NXR1 RNU6-231P-201ENST00000517122 103 ntBASIC-1.1□□□□□ -2.59
NDE1Q9NXR1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.11□□□□□ -2.59
NDE1Q9NXR1 AC103706.3-201ENST00000636297 85 ntBASIC-1.11□□□□□ -2.59
NDE1Q9NXR1 RNU6-576P-201ENST00000390854 102 ntBASIC-1.12□□□□□ -2.59
NDE1Q9NXR1 SNORD116.2-201ENST00000391251 93 ntBASIC-1.12□□□□□ -2.59
NDE1Q9NXR1 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.12□□□□□ -2.59
NDE1Q9NXR1 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.12□□□□□ -2.59
NDE1Q9NXR1 SNORD63.2-201ENST00000516303 64 ntBASIC-1.13□□□□□ -2.59
NDE1Q9NXR1 MIR7110-201ENST00000612638 86 ntBASIC-1.13□□□□□ -2.59
NDE1Q9NXR1 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.13□□□□□ -2.59
NDE1Q9NXR1 RNU6-810P-201ENST00000364001 107 ntBASIC-1.14□□□□□ -2.59
NDE1Q9NXR1 MIR4306-201ENST00000583390 91 ntBASIC-1.14□□□□□ -2.59
NDE1Q9NXR1 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.14□□□□□ -2.59
NDE1Q9NXR1 RNU6-669P-201ENST00000365575 107 ntBASIC-1.15□□□□□ -2.59
NDE1Q9NXR1 RNU6-164P-201ENST00000364604 103 ntBASIC-1.16□□□□□ -2.6
NDE1Q9NXR1 MIR125B1-201ENST00000385236 88 ntBASIC-1.16□□□□□ -2.6
NDE1Q9NXR1 AC114801.3-201ENST00000510231 177 ntBASIC-1.16□□□□□ -2.6
NDE1Q9NXR1 MIR6874-201ENST00000635894 71 ntBASIC-1.16□□□□□ -2.6
NDE1Q9NXR1 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.17□□□□□ -2.6
NDE1Q9NXR1 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.17□□□□□ -2.6
NDE1Q9NXR1 RNU6-940P-201ENST00000363433 104 ntBASIC-1.18□□□□□ -2.6
NDE1Q9NXR1 RNU6-974P-201ENST00000384099 108 ntBASIC-1.18□□□□□ -2.6
NDE1Q9NXR1 AC091912.2-201ENST00000624798 167 ntBASIC-1.18□□□□□ -2.6
NDE1Q9NXR1 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.19□□□□□ -2.6
NDE1Q9NXR1 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.19□□□□□ -2.6
NDE1Q9NXR1 RNU6-638P-201ENST00000516582 104 ntBASIC-1.19□□□□□ -2.6
NDE1Q9NXR1 RNU6-706P-201ENST00000517229 104 ntBASIC-1.19□□□□□ -2.6
NDE1Q9NXR1 MIR466-201ENST00000580653 84 ntBASIC-1.19□□□□□ -2.6
NDE1Q9NXR1 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.2□□□□□ -2.6
NDE1Q9NXR1 MIR8485-201ENST00000401372 91 ntBASIC-1.2□□□□□ -2.6
NDE1Q9NXR1 MIR1246-201ENST00000636535 73 ntBASIC-1.2□□□□□ -2.6
NDE1Q9NXR1 AC018880.2-201ENST00000414265 201 ntBASIC-1.21□□□□□ -2.6
NDE1Q9NXR1 SNORA40B-201ENST00000385573 128 ntBASIC-1.22□□□□□ -2.6
NDE1Q9NXR1 AC110620.1-201ENST00000416042 228 ntBASIC-1.22□□□□□ -2.6
NDE1Q9NXR1 RNU7-160P-201ENST00000516660 62 ntBASIC-1.22□□□□□ -2.6
NDE1Q9NXR1 SNORA40.16-201ENST00000517238 121 ntBASIC-1.22□□□□□ -2.6
NDE1Q9NXR1 RNU7-119P-201ENST00000459279 63 ntBASIC-1.24□□□□□ -2.61
NDE1Q9NXR1 MIR3938-201ENST00000582157 103 ntBASIC-1.24□□□□□ -2.61
NDE1Q9NXR1 SNORA27.2-201ENST00000363365 126 ntBASIC-1.26□□□□□ -2.61
NDE1Q9NXR1 RNU6-563P-201ENST00000364872 108 ntBASIC-1.26□□□□□ -2.61
NDE1Q9NXR1 RNU6-828P-201ENST00000364876 107 ntBASIC-1.26□□□□□ -2.61
NDE1Q9NXR1 RNU6-471P-201ENST00000383944 106 ntBASIC-1.26□□□□□ -2.61
NDE1Q9NXR1 HLA-S-202ENST00000425174 53 ntBASIC-1.26□□□□□ -2.61
NDE1Q9NXR1 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.27□□□□□ -2.61
NDE1Q9NXR1 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.27□□□□□ -2.61
NDE1Q9NXR1 AC120024.2-201ENST00000576526 175 ntBASIC-1.27□□□□□ -2.61
NDE1Q9NXR1 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.28□□□□□ -2.61
NDE1Q9NXR1 MIR23C-201ENST00000579846 100 ntBASIC-1.28□□□□□ -2.61
NDE1Q9NXR1 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.3□□□□□ -2.62
NDE1Q9NXR1 RNY3P8-201ENST00000411366 126 ntBASIC-1.3□□□□□ -2.62
NDE1Q9NXR1 RNU6-79P-201ENST00000362511 107 ntBASIC-1.31□□□□□ -2.62
NDE1Q9NXR1 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.31□□□□□ -2.62
NDE1Q9NXR1 RNU6-226P-201ENST00000363778 107 ntBASIC-1.31□□□□□ -2.62
NDE1Q9NXR1 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.31□□□□□ -2.62
NDE1Q9NXR1 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.31□□□□□ -2.62
NDE1Q9NXR1 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.31□□□□□ -2.62
NDE1Q9NXR1 RNU6-520P-201ENST00000384717 104 ntBASIC-1.33□□□□□ -2.62
NDE1Q9NXR1 AC138207.3-201ENST00000585289 166 ntBASIC-1.33□□□□□ -2.62
NDE1Q9NXR1 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.34□□□□□ -2.62
NDE1Q9NXR1 MIR5591-201ENST00000578248 65 ntBASIC-1.35□□□□□ -2.63
NDE1Q9NXR1 AC013734.1-201ENST00000619329 111 ntBASIC-1.35□□□□□ -2.63
NDE1Q9NXR1 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.36□□□□□ -2.63
NDE1Q9NXR1 MIR4520-1-201ENST00000582609 70 ntBASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms