Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 RNU6-687P-201ENST00000516443 89 ntBASIC-1.76□□□□□ -2.69
CCL28Q9NRJ3 RNU7-151P-201ENST00000516930 53 ntBASIC-1.76□□□□□ -2.69
CCL28Q9NRJ3 U2.22-201ENST00000636441 106 ntBASIC-1.76□□□□□ -2.69
CCL28Q9NRJ3 U4.2-201ENST00000618561 85 ntBASIC-1.77□□□□□ -2.69
CCL28Q9NRJ3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.78□□□□□ -2.69
CCL28Q9NRJ3 RNU6-411P-201ENST00000384451 107 ntBASIC-1.79□□□□□ -2.7
CCL28Q9NRJ3 RNU6-258P-201ENST00000390884 101 ntBASIC-1.79□□□□□ -2.7
CCL28Q9NRJ3 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.79□□□□□ -2.7
CCL28Q9NRJ3 AC120024.2-201ENST00000576526 175 ntBASIC-1.79□□□□□ -2.7
CCL28Q9NRJ3 RNU6-92P-201ENST00000605893 104 ntBASIC-1.79□□□□□ -2.7
CCL28Q9NRJ3 RNU6-820P-201ENST00000384273 107 ntBASIC-1.8□□□□□ -2.7
CCL28Q9NRJ3 MIR579-201ENST00000385221 98 ntBASIC-1.8□□□□□ -2.7
CCL28Q9NRJ3 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.8□□□□□ -2.7
CCL28Q9NRJ3 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.8□□□□□ -2.7
CCL28Q9NRJ3 MIR7978-201ENST00000636158 59 ntBASIC-1.8□□□□□ -2.7
CCL28Q9NRJ3 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.81□□□□□ -2.7
CCL28Q9NRJ3 SNORD63.2-201ENST00000516303 64 ntBASIC-1.81□□□□□ -2.7
CCL28Q9NRJ3 SNORA27.2-201ENST00000363365 126 ntBASIC-1.82□□□□□ -2.7
CCL28Q9NRJ3 RNU6-787P-201ENST00000384032 107 ntBASIC-1.82□□□□□ -2.7
CCL28Q9NRJ3 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.82□□□□□ -2.7
CCL28Q9NRJ3 RNU6-228P-201ENST00000362700 106 ntBASIC-1.83□□□□□ -2.7
CCL28Q9NRJ3 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.83□□□□□ -2.7
CCL28Q9NRJ3 RNU6-669P-201ENST00000365575 107 ntBASIC-1.83□□□□□ -2.7
CCL28Q9NRJ3 MIR125B1-201ENST00000385236 88 ntBASIC-1.83□□□□□ -2.7
CCL28Q9NRJ3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.83□□□□□ -2.7
CCL28Q9NRJ3 RNU6-695P-201ENST00000391157 104 ntBASIC-1.83□□□□□ -2.7
CCL28Q9NRJ3 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.83□□□□□ -2.7
CCL28Q9NRJ3 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.84□□□□□ -2.7
CCL28Q9NRJ3 RNU6-563P-201ENST00000364872 108 ntBASIC-1.84□□□□□ -2.7
CCL28Q9NRJ3 SNORD114-3-201ENST00000364969 75 ntBASIC-1.84□□□□□ -2.7
CCL28Q9NRJ3 AC108019.1-201ENST00000512540 175 ntBASIC-1.84□□□□□ -2.7
CCL28Q9NRJ3 MIR5582-201ENST00000579697 68 ntBASIC-1.84□□□□□ -2.7
CCL28Q9NRJ3 U7.4-201ENST00000614961 63 ntBASIC-1.84□□□□□ -2.7
CCL28Q9NRJ3 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.85□□□□□ -2.71
CCL28Q9NRJ3 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.86□□□□□ -2.71
CCL28Q9NRJ3 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.87□□□□□ -2.71
CCL28Q9NRJ3 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.87□□□□□ -2.71
CCL28Q9NRJ3 RNU6-523P-201ENST00000516304 54 ntBASIC-1.87□□□□□ -2.71
CCL28Q9NRJ3 RNU7-160P-201ENST00000516660 62 ntBASIC-1.87□□□□□ -2.71
CCL28Q9NRJ3 SNORD60.1-201ENST00000362451 73 ntBASIC-1.88□□□□□ -2.71
CCL28Q9NRJ3 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.88□□□□□ -2.71
CCL28Q9NRJ3 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.88□□□□□ -2.71
CCL28Q9NRJ3 RNU6-634P-201ENST00000459134 106 ntBASIC-1.88□□□□□ -2.71
CCL28Q9NRJ3 AC062037.1-201ENST00000605302 128 ntBASIC-1.88□□□□□ -2.71
CCL28Q9NRJ3 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.9□□□□□ -2.71
CCL28Q9NRJ3 RNU6-663P-201ENST00000391105 106 ntBASIC-1.9□□□□□ -2.71
CCL28Q9NRJ3 MIR4756-201ENST00000577874 78 ntBASIC-1.9□□□□□ -2.71
CCL28Q9NRJ3 MIR7110-201ENST00000612638 86 ntBASIC-1.9□□□□□ -2.71
CCL28Q9NRJ3 MIR664B-201ENST00000626756 61 ntBASIC-1.91□□□□□ -2.72
CCL28Q9NRJ3 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.92□□□□□ -2.72
CCL28Q9NRJ3 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.92□□□□□ -2.72
CCL28Q9NRJ3 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.93□□□□□ -2.72
CCL28Q9NRJ3 RNU6-231P-201ENST00000517122 103 ntBASIC-1.93□□□□□ -2.72
CCL28Q9NRJ3 MIR4723-201ENST00000585070 81 ntBASIC-1.93□□□□□ -2.72
CCL28Q9NRJ3 RNU6-828P-201ENST00000364876 107 ntBASIC-1.94□□□□□ -2.72
CCL28Q9NRJ3 MIR3123-201ENST00000583417 75 ntBASIC-1.94□□□□□ -2.72
CCL28Q9NRJ3 AC005520.4-201ENST00000604337 90 ntBASIC-1.94□□□□□ -2.72
CCL28Q9NRJ3 MIR3202-2-201ENST00000635980 79 ntBASIC-1.94□□□□□ -2.72
CCL28Q9NRJ3 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.95□□□□□ -2.72
CCL28Q9NRJ3 RNY4P27-201ENST00000363341 96 ntBASIC-1.96□□□□□ -2.72
CCL28Q9NRJ3 SNORA25.4-201ENST00000363666 124 ntBASIC-1.96□□□□□ -2.72
CCL28Q9NRJ3 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.96□□□□□ -2.72
CCL28Q9NRJ3 RNU6-841P-201ENST00000383872 107 ntBASIC-1.96□□□□□ -2.72
CCL28Q9NRJ3 MIR1207-201ENST00000408249 87 ntBASIC-1.96□□□□□ -2.72
CCL28Q9NRJ3 RNY3P8-201ENST00000411366 126 ntBASIC-1.96□□□□□ -2.72
CCL28Q9NRJ3 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.96□□□□□ -2.72
CCL28Q9NRJ3 AC013734.1-201ENST00000619329 111 ntBASIC-1.96□□□□□ -2.72
CCL28Q9NRJ3 RNU6-810P-201ENST00000364001 107 ntBASIC-1.97□□□□□ -2.72
CCL28Q9NRJ3 RNU6-974P-201ENST00000384099 108 ntBASIC-1.97□□□□□ -2.72
CCL28Q9NRJ3 SNORA25.5-201ENST00000363782 126 ntBASIC-1.98□□□□□ -2.73
CCL28Q9NRJ3 RNU6-122P-201ENST00000516818 107 ntBASIC-1.98□□□□□ -2.73
CCL28Q9NRJ3 SNORD116.2-201ENST00000391251 93 ntBASIC-1.99□□□□□ -2.73
CCL28Q9NRJ3 RNU6-871P-201ENST00000516122 100 ntBASIC-1.99□□□□□ -2.73
CCL28Q9NRJ3 SNORD30.1-201ENST00000391309 70 ntBASIC-2□□□□□ -2.73
CCL28Q9NRJ3 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.01□□□□□ -2.73
CCL28Q9NRJ3 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.01□□□□□ -2.73
CCL28Q9NRJ3 RNU6-520P-201ENST00000384717 104 ntBASIC-2.01□□□□□ -2.73
CCL28Q9NRJ3 SNORA40B-201ENST00000385573 128 ntBASIC-2.01□□□□□ -2.73
CCL28Q9NRJ3 U6.97-201ENST00000636904 101 ntBASIC-2.01□□□□□ -2.73
CCL28Q9NRJ3 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.02□□□□□ -2.73
CCL28Q9NRJ3 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.03□□□□□ -2.73
CCL28Q9NRJ3 RNU6-980P-201ENST00000516925 103 ntBASIC-2.03□□□□□ -2.73
CCL28Q9NRJ3 RNA5SP170-201ENST00000517150 101 ntBASIC-2.03□□□□□ -2.73
CCL28Q9NRJ3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.03□□□□□ -2.73
CCL28Q9NRJ3 MIR548AM-201ENST00000584298 74 ntBASIC-2.03□□□□□ -2.73
CCL28Q9NRJ3 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.03□□□□□ -2.73
CCL28Q9NRJ3 SNORD73B-201ENST00000364394 72 ntBASIC-2.04□□□□□ -2.74
CCL28Q9NRJ3 RNU7-119P-201ENST00000459279 63 ntBASIC-2.04□□□□□ -2.74
CCL28Q9NRJ3 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.04□□□□□ -2.74
CCL28Q9NRJ3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-2.04□□□□□ -2.74
CCL28Q9NRJ3 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.05□□□□□ -2.74
CCL28Q9NRJ3 RNU6-857P-201ENST00000515893 110 ntBASIC-2.05□□□□□ -2.74
CCL28Q9NRJ3 SNORD18C-201ENST00000362704 69 ntBASIC-2.06□□□□□ -2.74
CCL28Q9NRJ3 RNU6-279P-201ENST00000391297 101 ntBASIC-2.06□□□□□ -2.74
CCL28Q9NRJ3 RNA5SP405-201ENST00000363059 114 ntBASIC-2.07□□□□□ -2.74
CCL28Q9NRJ3 SNORD60-201ENST00000383903 83 ntBASIC-2.07□□□□□ -2.74
CCL28Q9NRJ3 RNU6-649P-201ENST00000384463 107 ntBASIC-2.07□□□□□ -2.74
CCL28Q9NRJ3 MIR4511-201ENST00000582784 87 ntBASIC-2.07□□□□□ -2.74
CCL28Q9NRJ3 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.08□□□□□ -2.74
CCL28Q9NRJ3 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.08□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 261.6 ms