Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 RNU6-530P-201ENST00000391180 107 ntBASIC-1.72□□□□□ -2.68
ALX4Q9H161 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.72□□□□□ -2.68
ALX4Q9H161 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.72□□□□□ -2.68
ALX4Q9H161 RNU6-789P-201ENST00000517105 102 ntBASIC-1.72□□□□□ -2.68
ALX4Q9H161 RNU6-834P-201ENST00000362367 110 ntBASIC-1.73□□□□□ -2.69
ALX4Q9H161 SNORD116-14-201ENST00000383894 92 ntBASIC-1.73□□□□□ -2.69
ALX4Q9H161 SNORD116-17-201ENST00000383929 92 ntBASIC-1.73□□□□□ -2.69
ALX4Q9H161 SNORD116-15-201ENST00000384445 92 ntBASIC-1.73□□□□□ -2.69
ALX4Q9H161 SNORD116-19-201ENST00000384729 92 ntBASIC-1.73□□□□□ -2.69
ALX4Q9H161 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.73□□□□□ -2.69
ALX4Q9H161 MIR7110-201ENST00000612638 86 ntBASIC-1.73□□□□□ -2.69
ALX4Q9H161 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.73□□□□□ -2.69
ALX4Q9H161 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.73□□□□□ -2.69
ALX4Q9H161 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.74□□□□□ -2.69
ALX4Q9H161 RNU6-196P-201ENST00000384315 107 ntBASIC-1.74□□□□□ -2.69
ALX4Q9H161 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.74□□□□□ -2.69
ALX4Q9H161 MIR548AI-201ENST00000579940 88 ntBASIC-1.74□□□□□ -2.69
ALX4Q9H161 RNU6-92P-201ENST00000605893 104 ntBASIC-1.74□□□□□ -2.69
ALX4Q9H161 SNORD60.1-201ENST00000362451 73 ntBASIC-1.75□□□□□ -2.69
ALX4Q9H161 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.75□□□□□ -2.69
ALX4Q9H161 SNORD54-201ENST00000459159 67 ntBASIC-1.75□□□□□ -2.69
ALX4Q9H161 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.75□□□□□ -2.69
ALX4Q9H161 RNU6-255P-201ENST00000516957 105 ntBASIC-1.75□□□□□ -2.69
ALX4Q9H161 RNU6-231P-201ENST00000517122 103 ntBASIC-1.75□□□□□ -2.69
ALX4Q9H161 AC006160.2-201ENST00000637708 154 ntBASIC-1.75□□□□□ -2.69
ALX4Q9H161 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.76□□□□□ -2.69
ALX4Q9H161 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.76□□□□□ -2.69
ALX4Q9H161 RNU6-327P-201ENST00000516270 127 ntBASIC-1.76□□□□□ -2.69
ALX4Q9H161 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.76□□□□□ -2.69
ALX4Q9H161 MALAT1.1-201ENST00000618249 95 ntBASIC-1.76□□□□□ -2.69
ALX4Q9H161 MIR379-201ENST00000362218 67 ntBASIC-1.77□□□□□ -2.69
ALX4Q9H161 RNU6-675P-201ENST00000384236 104 ntBASIC-1.77□□□□□ -2.69
ALX4Q9H161 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.77□□□□□ -2.69
ALX4Q9H161 MIR2052-201ENST00000636055 55 ntBASIC-1.77□□□□□ -2.69
ALX4Q9H161 RNU6-315P-201ENST00000362666 107 ntBASIC-1.78□□□□□ -2.69
ALX4Q9H161 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.78□□□□□ -2.69
ALX4Q9H161 RNY1P5-201ENST00000383890 115 ntBASIC-1.78□□□□□ -2.69
ALX4Q9H161 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.78□□□□□ -2.69
ALX4Q9H161 SNORD116.2-201ENST00000391251 93 ntBASIC-1.78□□□□□ -2.69
ALX4Q9H161 RNU6-542P-201ENST00000516405 103 ntBASIC-1.78□□□□□ -2.69
ALX4Q9H161 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.78□□□□□ -2.69
ALX4Q9H161 MIR4426-201ENST00000640330 63 ntBASIC-1.78□□□□□ -2.69
ALX4Q9H161 MIR1254-1-201ENST00000408257 97 ntBASIC-1.79□□□□□ -2.7
ALX4Q9H161 RNU6-230P-201ENST00000362457 104 ntBASIC-1.8□□□□□ -2.7
ALX4Q9H161 RNU6-590P-201ENST00000365039 107 ntBASIC-1.8□□□□□ -2.7
ALX4Q9H161 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.8□□□□□ -2.7
ALX4Q9H161 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.8□□□□□ -2.7
ALX4Q9H161 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.8□□□□□ -2.7
ALX4Q9H161 SNORA40B-201ENST00000385573 128 ntBASIC-1.8□□□□□ -2.7
ALX4Q9H161 RNU6-380P-201ENST00000410207 107 ntBASIC-1.8□□□□□ -2.7
ALX4Q9H161 RNU6-589P-201ENST00000516485 107 ntBASIC-1.8□□□□□ -2.7
ALX4Q9H161 SNORA40.16-201ENST00000517238 121 ntBASIC-1.8□□□□□ -2.7
ALX4Q9H161 MIR488-201ENST00000365739 83 ntBASIC-1.81□□□□□ -2.7
ALX4Q9H161 RNU6-895P-201ENST00000384125 103 ntBASIC-1.81□□□□□ -2.7
ALX4Q9H161 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.81□□□□□ -2.7
ALX4Q9H161 MIR154-201ENST00000385243 84 ntBASIC-1.81□□□□□ -2.7
ALX4Q9H161 RNU6-70P-201ENST00000516438 60 ntBASIC-1.81□□□□□ -2.7
ALX4Q9H161 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.81□□□□□ -2.7
ALX4Q9H161 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.81□□□□□ -2.7
ALX4Q9H161 MIR450A1-201ENST00000362262 91 ntBASIC-1.82□□□□□ -2.7
ALX4Q9H161 RNA5SP93-201ENST00000362525 114 ntBASIC-1.82□□□□□ -2.7
ALX4Q9H161 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.82□□□□□ -2.7
ALX4Q9H161 RNU6-463P-201ENST00000384340 107 ntBASIC-1.82□□□□□ -2.7
ALX4Q9H161 RNU6-300P-201ENST00000459080 104 ntBASIC-1.82□□□□□ -2.7
ALX4Q9H161 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.82□□□□□ -2.7
ALX4Q9H161 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.83□□□□□ -2.7
ALX4Q9H161 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.83□□□□□ -2.7
ALX4Q9H161 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.83□□□□□ -2.7
ALX4Q9H161 AL451105.1-201ENST00000450005 189 ntBASIC-1.83□□□□□ -2.7
ALX4Q9H161 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.83□□□□□ -2.7
ALX4Q9H161 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.84□□□□□ -2.7
ALX4Q9H161 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.84□□□□□ -2.7
ALX4Q9H161 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.84□□□□□ -2.7
ALX4Q9H161 MT-TG-201ENST00000387429 68 ntBASIC-1.84□□□□□ -2.7
ALX4Q9H161 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.84□□□□□ -2.7
ALX4Q9H161 SNORA40.13-201ENST00000516379 120 ntBASIC-1.85□□□□□ -2.71
ALX4Q9H161 RNU6-687P-201ENST00000516443 89 ntBASIC-1.85□□□□□ -2.71
ALX4Q9H161 RNU6-844P-201ENST00000517175 102 ntBASIC-1.85□□□□□ -2.71
ALX4Q9H161 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.85□□□□□ -2.71
ALX4Q9H161 AL731768.1-201ENST00000603124 139 ntBASIC-1.85□□□□□ -2.71
ALX4Q9H161 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.86□□□□□ -2.71
ALX4Q9H161 RNU6-742P-201ENST00000365289 107 ntBASIC-1.86□□□□□ -2.71
ALX4Q9H161 MIR5693-201ENST00000577722 73 ntBASIC-1.86□□□□□ -2.71
ALX4Q9H161 MIR3134-201ENST00000579433 74 ntBASIC-1.86□□□□□ -2.71
ALX4Q9H161 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.87□□□□□ -2.71
ALX4Q9H161 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.87□□□□□ -2.71
ALX4Q9H161 AL031737.1-201ENST00000450125 223 ntBASIC-1.87□□□□□ -2.71
ALX4Q9H161 RNU6-176P-201ENST00000517196 105 ntBASIC-1.87□□□□□ -2.71
ALX4Q9H161 MIR4712-201ENST00000583750 82 ntBASIC-1.87□□□□□ -2.71
ALX4Q9H161 SNORD45.2-201ENST00000363552 72 ntBASIC-1.88□□□□□ -2.71
ALX4Q9H161 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.88□□□□□ -2.71
ALX4Q9H161 RNU6-122P-201ENST00000516818 107 ntBASIC-1.88□□□□□ -2.71
ALX4Q9H161 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.89□□□□□ -2.71
ALX4Q9H161 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.89□□□□□ -2.71
ALX4Q9H161 RNU6-640P-201ENST00000363693 105 ntBASIC-1.89□□□□□ -2.71
ALX4Q9H161 RNU6-979P-201ENST00000383896 107 ntBASIC-1.89□□□□□ -2.71
ALX4Q9H161 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.89□□□□□ -2.71
ALX4Q9H161 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.89□□□□□ -2.71
ALX4Q9H161 RNU6-345P-201ENST00000517001 107 ntBASIC-1.89□□□□□ -2.71
ALX4Q9H161 MIR5588-201ENST00000581890 63 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms