Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 SNORD18C-201ENST00000362704 69 ntBASIC-1.94□□□□□ -2.72
SHANK3Q9BYB0 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.94□□□□□ -2.72
SHANK3Q9BYB0 RNU6-258P-201ENST00000390884 101 ntBASIC-1.94□□□□□ -2.72
SHANK3Q9BYB0 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.94□□□□□ -2.72
SHANK3Q9BYB0 RNU6-228P-201ENST00000362700 106 ntBASIC-1.94□□□□□ -2.72
SHANK3Q9BYB0 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.94□□□□□ -2.72
SHANK3Q9BYB0 RNU6-313P-201ENST00000516317 112 ntBASIC-1.94□□□□□ -2.72
SHANK3Q9BYB0 SNORD63.2-201ENST00000516303 64 ntBASIC-1.95□□□□□ -2.72
SHANK3Q9BYB0 RNU6-523P-201ENST00000516304 54 ntBASIC-1.95□□□□□ -2.72
SHANK3Q9BYB0 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.95□□□□□ -2.72
SHANK3Q9BYB0 AC013734.1-201ENST00000619329 111 ntBASIC-1.95□□□□□ -2.72
SHANK3Q9BYB0 RNU7-171P-201ENST00000459581 62 ntBASIC-1.96□□□□□ -2.72
SHANK3Q9BYB0 RNU7-160P-201ENST00000516660 62 ntBASIC-1.96□□□□□ -2.72
SHANK3Q9BYB0 MIR664B-201ENST00000626756 61 ntBASIC-1.96□□□□□ -2.72
SHANK3Q9BYB0 MIR487B-201ENST00000385021 84 ntBASIC-1.97□□□□□ -2.72
SHANK3Q9BYB0 RNU6-92P-201ENST00000605893 104 ntBASIC-1.97□□□□□ -2.72
SHANK3Q9BYB0 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.97□□□□□ -2.72
SHANK3Q9BYB0 RNU6-172P-201ENST00000411000 93 ntBASIC-1.97□□□□□ -2.73
SHANK3Q9BYB0 MIR1245B-201ENST00000636115 69 ntBASIC-1.97□□□□□ -2.73
SHANK3Q9BYB0 MIR3668-201ENST00000582138 75 ntBASIC-1.98□□□□□ -2.73
SHANK3Q9BYB0 RNU6-895P-201ENST00000384125 103 ntBASIC-1.99□□□□□ -2.73
SHANK3Q9BYB0 Y_RNA.284-201ENST00000364806 102 ntBASIC-2□□□□□ -2.73
SHANK3Q9BYB0 MIR488-201ENST00000365739 83 ntBASIC-2□□□□□ -2.73
SHANK3Q9BYB0 MIR579-201ENST00000385221 98 ntBASIC-2□□□□□ -2.73
SHANK3Q9BYB0 MIR125B1-201ENST00000385236 88 ntBASIC-2□□□□□ -2.73
SHANK3Q9BYB0 RNU6-640P-201ENST00000363693 105 ntBASIC-2□□□□□ -2.73
SHANK3Q9BYB0 Y_RNA.186-201ENST00000363899 92 ntBASIC-2□□□□□ -2.73
SHANK3Q9BYB0 RNU6-1134P-201ENST00000365156 101 ntBASIC-2□□□□□ -2.73
SHANK3Q9BYB0 SNORD116-24-201ENST00000384549 92 ntBASIC-2.01□□□□□ -2.73
SHANK3Q9BYB0 RNU6-789P-201ENST00000517105 102 ntBASIC-2.01□□□□□ -2.73
SHANK3Q9BYB0 U6.97-201ENST00000636904 101 ntBASIC-2.01□□□□□ -2.73
SHANK3Q9BYB0 SNORD45.2-201ENST00000363552 72 ntBASIC-2.02□□□□□ -2.73
SHANK3Q9BYB0 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.03□□□□□ -2.73
SHANK3Q9BYB0 MIR5588-201ENST00000581890 63 ntBASIC-2.03□□□□□ -2.73
SHANK3Q9BYB0 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.03□□□□□ -2.73
SHANK3Q9BYB0 MIR548AI-201ENST00000579940 88 ntBASIC-2.03□□□□□ -2.73
SHANK3Q9BYB0 RNU6-147P-201ENST00000383983 107 ntBASIC-2.04□□□□□ -2.74
SHANK3Q9BYB0 RNU4-88P-201ENST00000411220 86 ntBASIC-2.04□□□□□ -2.74
SHANK3Q9BYB0 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.04□□□□□ -2.74
SHANK3Q9BYB0 RNU6-919P-201ENST00000516731 104 ntBASIC-2.04□□□□□ -2.74
SHANK3Q9BYB0 MIR4756-201ENST00000577874 78 ntBASIC-2.04□□□□□ -2.74
SHANK3Q9BYB0 MIR3910-1-201ENST00000580936 111 ntBASIC-2.05□□□□□ -2.74
SHANK3Q9BYB0 MIR379-201ENST00000362218 67 ntBASIC-2.05□□□□□ -2.74
SHANK3Q9BYB0 RNU6-361P-201ENST00000364454 107 ntBASIC-2.05□□□□□ -2.74
SHANK3Q9BYB0 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.05□□□□□ -2.74
SHANK3Q9BYB0 RNU6-520P-201ENST00000384717 104 ntBASIC-2.05□□□□□ -2.74
SHANK3Q9BYB0 MIR548W-201ENST00000581970 74 ntBASIC-2.05□□□□□ -2.74
SHANK3Q9BYB0 RNU6-828P-201ENST00000364876 107 ntBASIC-2.06□□□□□ -2.74
SHANK3Q9BYB0 MIR548N-201ENST00000408742 75 ntBASIC-2.06□□□□□ -2.74
SHANK3Q9BYB0 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.06□□□□□ -2.74
SHANK3Q9BYB0 RNY3P8-201ENST00000411366 126 ntBASIC-2.06□□□□□ -2.74
SHANK3Q9BYB0 MIR7110-201ENST00000612638 86 ntBASIC-2.06□□□□□ -2.74
SHANK3Q9BYB0 SNORD60.1-201ENST00000362451 73 ntBASIC-2.07□□□□□ -2.74
SHANK3Q9BYB0 RNU6-974P-201ENST00000384099 108 ntBASIC-2.07□□□□□ -2.74
SHANK3Q9BYB0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.07□□□□□ -2.74
SHANK3Q9BYB0 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.07□□□□□ -2.74
SHANK3Q9BYB0 MIR450A2-201ENST00000385022 100 ntBASIC-2.08□□□□□ -2.74
SHANK3Q9BYB0 snoU13.10-201ENST00000459301 103 ntBASIC-2.08□□□□□ -2.74
SHANK3Q9BYB0 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.08□□□□□ -2.74
SHANK3Q9BYB0 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.08□□□□□ -2.74
SHANK3Q9BYB0 SNORA25.5-201ENST00000363782 126 ntBASIC-2.08□□□□□ -2.74
SHANK3Q9BYB0 U7.4-201ENST00000614961 63 ntBASIC-2.08□□□□□ -2.74
SHANK3Q9BYB0 RNU6-649P-201ENST00000384463 107 ntBASIC-2.1□□□□□ -2.75
SHANK3Q9BYB0 SNORD20-201ENST00000384550 80 ntBASIC-2.1□□□□□ -2.75
SHANK3Q9BYB0 SNORA17.4-201ENST00000391287 132 ntBASIC-2.1□□□□□ -2.75
SHANK3Q9BYB0 MIR4712-201ENST00000583750 82 ntBASIC-2.1□□□□□ -2.75
SHANK3Q9BYB0 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.1□□□□□ -2.75
SHANK3Q9BYB0 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.11□□□□□ -2.75
SHANK3Q9BYB0 SNORD115-31-201ENST00000365318 82 ntBASIC-2.11□□□□□ -2.75
SHANK3Q9BYB0 RNY4P30-201ENST00000410216 95 ntBASIC-2.11□□□□□ -2.75
SHANK3Q9BYB0 RNU6-176P-201ENST00000517196 105 ntBASIC-2.11□□□□□ -2.75
SHANK3Q9BYB0 RNU6-810P-201ENST00000364001 107 ntBASIC-2.12□□□□□ -2.75
SHANK3Q9BYB0 SNORD113-1-201ENST00000365321 69 ntBASIC-2.12□□□□□ -2.75
SHANK3Q9BYB0 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.12□□□□□ -2.75
SHANK3Q9BYB0 RNU6-687P-201ENST00000516443 89 ntBASIC-2.12□□□□□ -2.75
SHANK3Q9BYB0 RNU6-940P-201ENST00000363433 104 ntBASIC-2.13□□□□□ -2.75
SHANK3Q9BYB0 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.13□□□□□ -2.75
SHANK3Q9BYB0 RNU6-411P-201ENST00000384451 107 ntBASIC-2.13□□□□□ -2.75
SHANK3Q9BYB0 MIR4748-201ENST00000578076 82 ntBASIC-2.13□□□□□ -2.75
SHANK3Q9BYB0 MIR3139-201ENST00000579145 76 ntBASIC-2.13□□□□□ -2.75
SHANK3Q9BYB0 MIR466-201ENST00000580653 84 ntBASIC-2.13□□□□□ -2.75
SHANK3Q9BYB0 RNU6-49P-201ENST00000384256 107 ntBASIC-2.14□□□□□ -2.75
SHANK3Q9BYB0 RNU7-119P-201ENST00000459279 63 ntBASIC-2.14□□□□□ -2.75
SHANK3Q9BYB0 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.14□□□□□ -2.75
SHANK3Q9BYB0 SNORA40B-201ENST00000385573 128 ntBASIC-2.14□□□□□ -2.75
SHANK3Q9BYB0 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.14□□□□□ -2.75
SHANK3Q9BYB0 MIR4666B-201ENST00000578142 81 ntBASIC-2.14□□□□□ -2.75
SHANK3Q9BYB0 MIR3134-201ENST00000579433 74 ntBASIC-2.14□□□□□ -2.75
SHANK3Q9BYB0 RNA5SP405-201ENST00000363059 114 ntBASIC-2.15□□□□□ -2.75
SHANK3Q9BYB0 RNU6-215P-201ENST00000365169 102 ntBASIC-2.15□□□□□ -2.75
SHANK3Q9BYB0 RNA5SP89-201ENST00000410300 108 ntBASIC-2.15□□□□□ -2.75
SHANK3Q9BYB0 RNU6-194P-201ENST00000363862 105 ntBASIC-2.16□□□□□ -2.75
SHANK3Q9BYB0 SNORD116.2-201ENST00000391251 93 ntBASIC-2.16□□□□□ -2.75
SHANK3Q9BYB0 AL606753.1-201ENST00000427435 87 ntBASIC-2.16□□□□□ -2.75
SHANK3Q9BYB0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.16□□□□□ -2.75
SHANK3Q9BYB0 MIR202-201ENST00000362219 110 ntBASIC-2.17□□□□□ -2.76
SHANK3Q9BYB0 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.17□□□□□ -2.76
SHANK3Q9BYB0 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.17□□□□□ -2.76
SHANK3Q9BYB0 RNU6-663P-201ENST00000391105 106 ntBASIC-2.17□□□□□ -2.76
SHANK3Q9BYB0 AC097484.2-201ENST00000509147 251 ntBASIC-2.17□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms