Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MIR604-201ENST00000384880 94 ntBASIC-0.47□□□□□ -2.48
PTCHD1Q96NR3 MIR101-1-201ENST00000362265 75 ntBASIC-0.48□□□□□ -2.49
PTCHD1Q96NR3 SNORA3B-201ENST00000391305 131 ntBASIC-0.48□□□□□ -2.49
PTCHD1Q96NR3 RNU6-980P-201ENST00000516925 103 ntBASIC-0.48□□□□□ -2.49
PTCHD1Q96NR3 RNU6-974P-201ENST00000384099 108 ntBASIC-0.49□□□□□ -2.49
PTCHD1Q96NR3 RNU6-141P-201ENST00000410499 105 ntBASIC-0.49□□□□□ -2.49
PTCHD1Q96NR3 RNU6-284P-201ENST00000411105 106 ntBASIC-0.49□□□□□ -2.49
PTCHD1Q96NR3 SNORD114-14-201ENST00000362723 75 ntBASIC-0.5□□□□□ -2.49
PTCHD1Q96NR3 RNU4-33P-201ENST00000364316 85 ntBASIC-0.5□□□□□ -2.49
PTCHD1Q96NR3 MIR4436A-201ENST00000585278 85 ntBASIC-0.5□□□□□ -2.49
PTCHD1Q96NR3 MIR548AZ-201ENST00000616567 95 ntBASIC-0.5□□□□□ -2.49
PTCHD1Q96NR3 RNA5SP368-201ENST00000364298 116 ntBASIC-0.51□□□□□ -2.49
PTCHD1Q96NR3 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.51□□□□□ -2.49
PTCHD1Q96NR3 RNA5SP451-201ENST00000410588 110 ntBASIC-0.51□□□□□ -2.49
PTCHD1Q96NR3 RNA5SP476-201ENST00000516613 103 ntBASIC-0.51□□□□□ -2.49
PTCHD1Q96NR3 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.51□□□□□ -2.49
PTCHD1Q96NR3 RNA5SP25-201ENST00000410815 110 ntBASIC-0.52□□□□□ -2.49
PTCHD1Q96NR3 RPS29P8-201ENST00000445109 171 ntBASIC-0.52□□□□□ -2.49
PTCHD1Q96NR3 AL451105.1-201ENST00000450005 189 ntBASIC-0.52□□□□□ -2.49
PTCHD1Q96NR3 SNORA32.3-201ENST00000384772 121 ntBASIC-0.53□□□□□ -2.49
PTCHD1Q96NR3 RNU6-258P-201ENST00000390884 101 ntBASIC-0.53□□□□□ -2.49
PTCHD1Q96NR3 HAR1A.1-201ENST00000459583 118 ntBASIC-0.54□□□□□ -2.5
PTCHD1Q96NR3 SNORD45.2-201ENST00000363552 72 ntBASIC-0.55□□□□□ -2.5
PTCHD1Q96NR3 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.55□□□□□ -2.5
PTCHD1Q96NR3 RNU6-608P-201ENST00000383927 104 ntBASIC-0.56□□□□□ -2.5
PTCHD1Q96NR3 MIR507-201ENST00000385234 94 ntBASIC-0.56□□□□□ -2.5
PTCHD1Q96NR3 SNORA27.2-201ENST00000363365 126 ntBASIC-0.57□□□□□ -2.5
PTCHD1Q96NR3 SNORD114-15-201ENST00000364687 72 ntBASIC-0.57□□□□□ -2.5
PTCHD1Q96NR3 MIR1468-201ENST00000410600 86 ntBASIC-0.57□□□□□ -2.5
PTCHD1Q96NR3 snoU13.19-201ENST00000459148 104 ntBASIC-0.57□□□□□ -2.5
PTCHD1Q96NR3 RNU6-753P-201ENST00000363926 107 ntBASIC-0.59□□□□□ -2.5
PTCHD1Q96NR3 MIR224-201ENST00000384889 81 ntBASIC-0.61□□□□□ -2.51
PTCHD1Q96NR3 MIR147A-201ENST00000385079 72 ntBASIC-0.61□□□□□ -2.51
PTCHD1Q96NR3 RPL35AP4-201ENST00000412007 102 ntBASIC-0.61□□□□□ -2.51
PTCHD1Q96NR3 RNU6-431P-201ENST00000383874 107 ntBASIC-0.64□□□□□ -2.51
PTCHD1Q96NR3 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.64□□□□□ -2.51
PTCHD1Q96NR3 SNORD95.1-201ENST00000364099 68 ntBASIC-0.66□□□□□ -2.52
PTCHD1Q96NR3 SNORD64-201ENST00000386683 67 ntBASIC-0.66□□□□□ -2.52
PTCHD1Q96NR3 RNU6-530P-201ENST00000391180 107 ntBASIC-0.66□□□□□ -2.52
PTCHD1Q96NR3 RNU6-30P-201ENST00000384561 107 ntBASIC-0.67□□□□□ -2.52
PTCHD1Q96NR3 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.67□□□□□ -2.52
PTCHD1Q96NR3 MIR3681-201ENST00000580089 72 ntBASIC-0.68□□□□□ -2.52
PTCHD1Q96NR3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.68□□□□□ -2.52
PTCHD1Q96NR3 MIR29B1-201ENST00000385015 81 ntBASIC-0.69□□□□□ -2.52
PTCHD1Q96NR3 RNA5SP26-201ENST00000362406 119 ntBASIC-0.7□□□□□ -2.52
PTCHD1Q96NR3 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
PTCHD1Q96NR3 RNU4-88P-201ENST00000411220 86 ntBASIC-0.7□□□□□ -2.52
PTCHD1Q96NR3 AC090616.4-201ENST00000448026 115 ntBASIC-0.72□□□□□ -2.52
PTCHD1Q96NR3 SNORD114-25-201ENST00000363742 72 ntBASIC-0.73□□□□□ -2.53
PTCHD1Q96NR3 MIR23C-201ENST00000579846 100 ntBASIC-0.73□□□□□ -2.53
PTCHD1Q96NR3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.73□□□□□ -2.53
PTCHD1Q96NR3 MIR196A1-201ENST00000388006 70 ntBASIC-0.74□□□□□ -2.53
PTCHD1Q96NR3 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.74□□□□□ -2.53
PTCHD1Q96NR3 RNU6-838P-201ENST00000363399 108 ntBASIC-0.75□□□□□ -2.53
PTCHD1Q96NR3 AL500527.2-201ENST00000454105 95 ntBASIC-0.75□□□□□ -2.53
PTCHD1Q96NR3 MIR382-201ENST00000637119 76 ntBASIC-0.75□□□□□ -2.53
PTCHD1Q96NR3 RNU6-930P-201ENST00000390938 100 ntBASIC-0.76□□□□□ -2.53
PTCHD1Q96NR3 RNU4-63P-201ENST00000411313 118 ntBASIC-0.76□□□□□ -2.53
PTCHD1Q96NR3 RNY3P8-201ENST00000411366 126 ntBASIC-0.76□□□□□ -2.53
PTCHD1Q96NR3 RNA5SP67-201ENST00000516422 131 ntBASIC-0.76□□□□□ -2.53
PTCHD1Q96NR3 snoU83B.1-201ENST00000517136 88 ntBASIC-0.76□□□□□ -2.53
PTCHD1Q96NR3 MT-TQ-201ENST00000387372 72 ntBASIC-0.78□□□□□ -2.53
PTCHD1Q96NR3 MIR548AL-201ENST00000578416 97 ntBASIC-0.79□□□□□ -2.54
PTCHD1Q96NR3 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.79□□□□□ -2.54
PTCHD1Q96NR3 MIR6818-201ENST00000621576 65 ntBASIC-0.79□□□□□ -2.54
PTCHD1Q96NR3 RNU6-742P-201ENST00000365289 107 ntBASIC-0.8□□□□□ -2.54
PTCHD1Q96NR3 MIR202-201ENST00000362219 110 ntBASIC-0.81□□□□□ -2.54
PTCHD1Q96NR3 RNU6-361P-201ENST00000364454 107 ntBASIC-0.81□□□□□ -2.54
PTCHD1Q96NR3 MIR4426-201ENST00000640330 63 ntBASIC-0.81□□□□□ -2.54
PTCHD1Q96NR3 MIR548F3-201ENST00000408509 87 ntBASIC-0.85□□□□□ -2.55
PTCHD1Q96NR3 MIR548AX-201ENST00000580117 73 ntBASIC-0.85□□□□□ -2.55
PTCHD1Q96NR3 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.85□□□□□ -2.55
PTCHD1Q96NR3 SNORA17.4-201ENST00000391287 132 ntBASIC-0.86□□□□□ -2.55
PTCHD1Q96NR3 SNORD60-201ENST00000383903 83 ntBASIC-0.87□□□□□ -2.55
PTCHD1Q96NR3 SNORD83B-201ENST00000386745 93 ntBASIC-0.87□□□□□ -2.55
PTCHD1Q96NR3 SCARNA17-201ENST00000516183 144 ntBASIC-0.87□□□□□ -2.55
PTCHD1Q96NR3 RNY1P9-201ENST00000532431 109 ntBASIC-0.87□□□□□ -2.55
PTCHD1Q96NR3 AC120024.2-201ENST00000576526 175 ntBASIC-0.87□□□□□ -2.55
PTCHD1Q96NR3 MIR4499-201ENST00000584834 69 ntBASIC-0.87□□□□□ -2.55
PTCHD1Q96NR3 AC018880.2-201ENST00000414265 201 ntBASIC-0.88□□□□□ -2.55
PTCHD1Q96NR3 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.89□□□□□ -2.55
PTCHD1Q96NR3 RNU6-164P-201ENST00000364604 103 ntBASIC-0.9□□□□□ -2.55
PTCHD1Q96NR3 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.9□□□□□ -2.55
PTCHD1Q96NR3 AC013734.1-201ENST00000619329 111 ntBASIC-0.9□□□□□ -2.55
PTCHD1Q96NR3 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.9□□□□□ -2.55
PTCHD1Q96NR3 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.91□□□□□ -2.56
PTCHD1Q96NR3 uc_338.19-201ENST00000616808 99 ntBASIC-0.91□□□□□ -2.56
PTCHD1Q96NR3 RNU6-563P-201ENST00000364872 108 ntBASIC-0.92□□□□□ -2.56
PTCHD1Q96NR3 RNU6-300P-201ENST00000459080 104 ntBASIC-0.92□□□□□ -2.56
PTCHD1Q96NR3 AL627230.5-201ENST00000619807 58 ntBASIC-0.92□□□□□ -2.56
PTCHD1Q96NR3 RNU6-576P-201ENST00000390854 102 ntBASIC-0.95□□□□□ -2.56
PTCHD1Q96NR3 RNU6-176P-201ENST00000517196 105 ntBASIC-0.95□□□□□ -2.56
PTCHD1Q96NR3 MIR378F-201ENST00000578143 78 ntBASIC-0.95□□□□□ -2.56
PTCHD1Q96NR3 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.95□□□□□ -2.56
PTCHD1Q96NR3 MIR409-201ENST00000362237 79 ntBASIC-0.96□□□□□ -2.56
PTCHD1Q96NR3 MIR548N-201ENST00000408742 75 ntBASIC-0.96□□□□□ -2.56
PTCHD1Q96NR3 RNU7-134P-201ENST00000458997 64 ntBASIC-0.96□□□□□ -2.56
PTCHD1Q96NR3 U6.97-201ENST00000636904 101 ntBASIC-0.97□□□□□ -2.56
PTCHD1Q96NR3 MIR545-201ENST00000385085 106 ntBASIC-0.99□□□□□ -2.57
PTCHD1Q96NR3 RNU6-79P-201ENST00000362511 107 ntBASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 231.7 ms