Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.96□□□□□ -2.56
SHROOM3Q8TF72 RNU6-608P-201ENST00000383927 104 ntBASIC-0.96□□□□□ -2.56
SHROOM3Q8TF72 RNU6-940P-201ENST00000363433 104 ntBASIC-0.97□□□□□ -2.56
SHROOM3Q8TF72 RNU6-411P-201ENST00000384451 107 ntBASIC-0.97□□□□□ -2.56
SHROOM3Q8TF72 SNORD116-24-201ENST00000384549 92 ntBASIC-0.97□□□□□ -2.56
SHROOM3Q8TF72 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.97□□□□□ -2.56
SHROOM3Q8TF72 RNU6-92P-201ENST00000605893 104 ntBASIC-0.97□□□□□ -2.56
SHROOM3Q8TF72 RNY4P27-201ENST00000363341 96 ntBASIC-0.97□□□□□ -2.57
SHROOM3Q8TF72 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.97□□□□□ -2.57
SHROOM3Q8TF72 MIR579-201ENST00000385221 98 ntBASIC-0.97□□□□□ -2.57
SHROOM3Q8TF72 RNY4P29-201ENST00000410801 97 ntBASIC-0.97□□□□□ -2.57
SHROOM3Q8TF72 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.98□□□□□ -2.57
SHROOM3Q8TF72 MIR520D-201ENST00000385002 87 ntBASIC-0.98□□□□□ -2.57
SHROOM3Q8TF72 RNA5SP170-201ENST00000517150 101 ntBASIC-0.98□□□□□ -2.57
SHROOM3Q8TF72 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.99□□□□□ -2.57
SHROOM3Q8TF72 RNU6-634P-201ENST00000459134 106 ntBASIC-0.99□□□□□ -2.57
SHROOM3Q8TF72 RNU6-857P-201ENST00000515893 110 ntBASIC-0.99□□□□□ -2.57
SHROOM3Q8TF72 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.99□□□□□ -2.57
SHROOM3Q8TF72 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.99□□□□□ -2.57
SHROOM3Q8TF72 SNORA25.4-201ENST00000363666 124 ntBASIC-0.99□□□□□ -2.57
SHROOM3Q8TF72 RNU6-995P-201ENST00000391244 107 ntBASIC-1□□□□□ -2.57
SHROOM3Q8TF72 Y_RNA.603-201ENST00000410571 108 ntBASIC-1□□□□□ -2.57
SHROOM3Q8TF72 RNU6-669P-201ENST00000365575 107 ntBASIC-1.01□□□□□ -2.57
SHROOM3Q8TF72 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.01□□□□□ -2.57
SHROOM3Q8TF72 SNORD73B-201ENST00000364394 72 ntBASIC-1.01□□□□□ -2.57
SHROOM3Q8TF72 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
SHROOM3Q8TF72 SNORD116.2-201ENST00000391251 93 ntBASIC-1.01□□□□□ -2.57
SHROOM3Q8TF72 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.01□□□□□ -2.57
SHROOM3Q8TF72 MIR6502-201ENST00000617296 76 ntBASIC-1.01□□□□□ -2.57
SHROOM3Q8TF72 AC091912.2-201ENST00000624798 167 ntBASIC-1.01□□□□□ -2.57
SHROOM3Q8TF72 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.02□□□□□ -2.57
SHROOM3Q8TF72 RNU6-172P-201ENST00000411000 93 ntBASIC-1.02□□□□□ -2.57
SHROOM3Q8TF72 RNU6-687P-201ENST00000516443 89 ntBASIC-1.02□□□□□ -2.57
SHROOM3Q8TF72 RNU6-226P-201ENST00000363778 107 ntBASIC-1.03□□□□□ -2.57
SHROOM3Q8TF72 RNU6-598P-201ENST00000364017 105 ntBASIC-1.03□□□□□ -2.57
SHROOM3Q8TF72 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.03□□□□□ -2.57
SHROOM3Q8TF72 RNA5SP225-201ENST00000410874 135 ntBASIC-1.03□□□□□ -2.57
SHROOM3Q8TF72 SNORD63.2-201ENST00000516303 64 ntBASIC-1.03□□□□□ -2.57
SHROOM3Q8TF72 MIR7978-201ENST00000636158 59 ntBASIC-1.03□□□□□ -2.57
SHROOM3Q8TF72 RNU6-563P-201ENST00000364872 108 ntBASIC-1.03□□□□□ -2.57
SHROOM3Q8TF72 MIR1302-4-201ENST00000408701 150 ntBASIC-1.03□□□□□ -2.57
SHROOM3Q8TF72 MIR6874-201ENST00000635894 71 ntBASIC-1.03□□□□□ -2.57
SHROOM3Q8TF72 RNU6-119P-201ENST00000364882 107 ntBASIC-1.04□□□□□ -2.58
SHROOM3Q8TF72 RNU6-695P-201ENST00000391157 104 ntBASIC-1.04□□□□□ -2.58
SHROOM3Q8TF72 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.05□□□□□ -2.58
SHROOM3Q8TF72 RNU6-649P-201ENST00000384463 107 ntBASIC-1.05□□□□□ -2.58
SHROOM3Q8TF72 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.05□□□□□ -2.58
SHROOM3Q8TF72 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.06□□□□□ -2.58
SHROOM3Q8TF72 RNU6-573P-201ENST00000383938 106 ntBASIC-1.07□□□□□ -2.58
SHROOM3Q8TF72 RNU6-400P-201ENST00000391173 106 ntBASIC-1.07□□□□□ -2.58
SHROOM3Q8TF72 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.07□□□□□ -2.58
SHROOM3Q8TF72 RNU6-79P-201ENST00000362511 107 ntBASIC-1.07□□□□□ -2.58
SHROOM3Q8TF72 SNORD78.1-201ENST00000390866 65 ntBASIC-1.07□□□□□ -2.58
SHROOM3Q8TF72 RNU6-871P-201ENST00000516122 100 ntBASIC-1.07□□□□□ -2.58
SHROOM3Q8TF72 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.07□□□□□ -2.58
SHROOM3Q8TF72 MIR1246-201ENST00000636535 73 ntBASIC-1.07□□□□□ -2.58
SHROOM3Q8TF72 MIR4679-1-201ENST00000637619 75 ntBASIC-1.07□□□□□ -2.58
SHROOM3Q8TF72 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.08□□□□□ -2.58
SHROOM3Q8TF72 MIR125B1-201ENST00000385236 88 ntBASIC-1.08□□□□□ -2.58
SHROOM3Q8TF72 SNORA40B-201ENST00000385573 128 ntBASIC-1.08□□□□□ -2.58
SHROOM3Q8TF72 SNORD30.1-201ENST00000391309 70 ntBASIC-1.08□□□□□ -2.58
SHROOM3Q8TF72 RNU6-523P-201ENST00000516304 54 ntBASIC-1.08□□□□□ -2.58
SHROOM3Q8TF72 MIR23C-201ENST00000579846 100 ntBASIC-1.08□□□□□ -2.58
SHROOM3Q8TF72 RNY4P7-201ENST00000364600 96 ntBASIC-1.09□□□□□ -2.58
SHROOM3Q8TF72 RNU6-974P-201ENST00000384099 108 ntBASIC-1.09□□□□□ -2.58
SHROOM3Q8TF72 RNY3P8-201ENST00000411366 126 ntBASIC-1.09□□□□□ -2.58
SHROOM3Q8TF72 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.09□□□□□ -2.58
SHROOM3Q8TF72 RNU6-258P-201ENST00000390884 101 ntBASIC-1.1□□□□□ -2.59
SHROOM3Q8TF72 RNU6-539P-201ENST00000516665 103 ntBASIC-1.1□□□□□ -2.59
SHROOM3Q8TF72 MIR4511-201ENST00000582784 87 ntBASIC-1.1□□□□□ -2.59
SHROOM3Q8TF72 MIR7110-201ENST00000612638 86 ntBASIC-1.1□□□□□ -2.59
SHROOM3Q8TF72 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.1□□□□□ -2.59
SHROOM3Q8TF72 U6.97-201ENST00000636904 101 ntBASIC-1.1□□□□□ -2.59
SHROOM3Q8TF72 RNU6-810P-201ENST00000364001 107 ntBASIC-1.1□□□□□ -2.59
SHROOM3Q8TF72 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.1□□□□□ -2.59
SHROOM3Q8TF72 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.1□□□□□ -2.59
SHROOM3Q8TF72 MIR3938-201ENST00000582157 103 ntBASIC-1.11□□□□□ -2.59
SHROOM3Q8TF72 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.12□□□□□ -2.59
SHROOM3Q8TF72 RNU6-540P-201ENST00000384622 101 ntBASIC-1.12□□□□□ -2.59
SHROOM3Q8TF72 MIR548H1-201ENST00000408610 102 ntBASIC-1.12□□□□□ -2.59
SHROOM3Q8TF72 RNA5SP180-201ENST00000516181 101 ntBASIC-1.12□□□□□ -2.59
SHROOM3Q8TF72 SNORA40.16-201ENST00000517238 121 ntBASIC-1.12□□□□□ -2.59
SHROOM3Q8TF72 RNU7-160P-201ENST00000516660 62 ntBASIC-1.13□□□□□ -2.59
SHROOM3Q8TF72 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.13□□□□□ -2.59
SHROOM3Q8TF72 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.14□□□□□ -2.59
SHROOM3Q8TF72 SNORA27.2-201ENST00000363365 126 ntBASIC-1.14□□□□□ -2.59
SHROOM3Q8TF72 MIR664B-201ENST00000626756 61 ntBASIC-1.14□□□□□ -2.59
SHROOM3Q8TF72 RNU7-119P-201ENST00000459279 63 ntBASIC-1.15□□□□□ -2.59
SHROOM3Q8TF72 RNU6-231P-201ENST00000517122 103 ntBASIC-1.16□□□□□ -2.59
SHROOM3Q8TF72 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.16□□□□□ -2.6
SHROOM3Q8TF72 RNU6-520P-201ENST00000384717 104 ntBASIC-1.16□□□□□ -2.6
SHROOM3Q8TF72 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.17□□□□□ -2.6
SHROOM3Q8TF72 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.17□□□□□ -2.6
SHROOM3Q8TF72 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.17□□□□□ -2.6
SHROOM3Q8TF72 MIR3123-201ENST00000583417 75 ntBASIC-1.17□□□□□ -2.6
SHROOM3Q8TF72 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.17□□□□□ -2.6
SHROOM3Q8TF72 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.17□□□□□ -2.6
SHROOM3Q8TF72 AC013734.1-201ENST00000619329 111 ntBASIC-1.17□□□□□ -2.6
SHROOM3Q8TF72 SNORD18C-201ENST00000362704 69 ntBASIC-1.18□□□□□ -2.6
SHROOM3Q8TF72 RNU6-776P-201ENST00000364403 104 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 354.3 ms