Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 MIR520D-201ENST00000385002 87 ntBASIC-1.18□□□□□ -2.6
PRPF38AQ8NAV1 MIR429-201ENST00000362106 83 ntBASIC-1.19□□□□□ -2.6
PRPF38AQ8NAV1 RNA5SP173-201ENST00000364857 136 ntBASIC-1.19□□□□□ -2.6
PRPF38AQ8NAV1 RNU6-458P-201ENST00000384179 107 ntBASIC-1.19□□□□□ -2.6
PRPF38AQ8NAV1 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.19□□□□□ -2.6
PRPF38AQ8NAV1 RNU6-696P-201ENST00000390834 107 ntBASIC-1.19□□□□□ -2.6
PRPF38AQ8NAV1 MIR4756-201ENST00000577874 78 ntBASIC-1.19□□□□□ -2.6
PRPF38AQ8NAV1 U6.58-201ENST00000613107 107 ntBASIC-1.19□□□□□ -2.6
PRPF38AQ8NAV1 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.2□□□□□ -2.6
PRPF38AQ8NAV1 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.2□□□□□ -2.6
PRPF38AQ8NAV1 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.21□□□□□ -2.6
PRPF38AQ8NAV1 RNU6-119P-201ENST00000364882 107 ntBASIC-1.21□□□□□ -2.6
PRPF38AQ8NAV1 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.21□□□□□ -2.6
PRPF38AQ8NAV1 RNU6-411P-201ENST00000384451 107 ntBASIC-1.21□□□□□ -2.6
PRPF38AQ8NAV1 AC120024.2-201ENST00000576526 175 ntBASIC-1.21□□□□□ -2.6
PRPF38AQ8NAV1 MIR3123-201ENST00000583417 75 ntBASIC-1.21□□□□□ -2.6
PRPF38AQ8NAV1 RNU6-563P-201ENST00000364872 108 ntBASIC-1.22□□□□□ -2.6
PRPF38AQ8NAV1 RNU6-841P-201ENST00000383872 107 ntBASIC-1.22□□□□□ -2.6
PRPF38AQ8NAV1 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.22□□□□□ -2.6
PRPF38AQ8NAV1 MIR23C-201ENST00000579846 100 ntBASIC-1.22□□□□□ -2.6
PRPF38AQ8NAV1 MIR664B-201ENST00000626756 61 ntBASIC-1.22□□□□□ -2.6
PRPF38AQ8NAV1 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.23□□□□□ -2.61
PRPF38AQ8NAV1 MIR3134-201ENST00000579433 74 ntBASIC-1.23□□□□□ -2.61
PRPF38AQ8NAV1 MIR548AM-201ENST00000584298 74 ntBASIC-1.23□□□□□ -2.61
PRPF38AQ8NAV1 RNU6-598P-201ENST00000364017 105 ntBASIC-1.24□□□□□ -2.61
PRPF38AQ8NAV1 RNY4P7-201ENST00000364600 96 ntBASIC-1.24□□□□□ -2.61
PRPF38AQ8NAV1 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.24□□□□□ -2.61
PRPF38AQ8NAV1 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.24□□□□□ -2.61
PRPF38AQ8NAV1 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.24□□□□□ -2.61
PRPF38AQ8NAV1 MIR496-201ENST00000385226 102 ntBASIC-1.24□□□□□ -2.61
PRPF38AQ8NAV1 SNORD113-2-201ENST00000391082 72 ntBASIC-1.24□□□□□ -2.61
PRPF38AQ8NAV1 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.25□□□□□ -2.61
PRPF38AQ8NAV1 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.25□□□□□ -2.61
PRPF38AQ8NAV1 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.25□□□□□ -2.61
PRPF38AQ8NAV1 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.25□□□□□ -2.61
PRPF38AQ8NAV1 RNU6-980P-201ENST00000516925 103 ntBASIC-1.25□□□□□ -2.61
PRPF38AQ8NAV1 RNU6-573P-201ENST00000383938 106 ntBASIC-1.26□□□□□ -2.61
PRPF38AQ8NAV1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.26□□□□□ -2.61
PRPF38AQ8NAV1 MIR548V-201ENST00000584165 80 ntBASIC-1.26□□□□□ -2.61
PRPF38AQ8NAV1 U2.18-201ENST00000622185 84 ntBASIC-1.26□□□□□ -2.61
PRPF38AQ8NAV1 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.26□□□□□ -2.61
PRPF38AQ8NAV1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.26□□□□□ -2.61
PRPF38AQ8NAV1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.27□□□□□ -2.61
PRPF38AQ8NAV1 RNU4-88P-201ENST00000411220 86 ntBASIC-1.27□□□□□ -2.61
PRPF38AQ8NAV1 MIR3170-201ENST00000582699 77 ntBASIC-1.27□□□□□ -2.61
PRPF38AQ8NAV1 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.28□□□□□ -2.61
PRPF38AQ8NAV1 RNU6-687P-201ENST00000516443 89 ntBASIC-1.28□□□□□ -2.61
PRPF38AQ8NAV1 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.28□□□□□ -2.61
PRPF38AQ8NAV1 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.29□□□□□ -2.62
PRPF38AQ8NAV1 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.29□□□□□ -2.62
PRPF38AQ8NAV1 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.29□□□□□ -2.62
PRPF38AQ8NAV1 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.29□□□□□ -2.62
PRPF38AQ8NAV1 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.3□□□□□ -2.62
PRPF38AQ8NAV1 U4.4-201ENST00000620626 117 ntBASIC-1.3□□□□□ -2.62
PRPF38AQ8NAV1 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.31□□□□□ -2.62
PRPF38AQ8NAV1 RNU6-279P-201ENST00000391297 101 ntBASIC-1.31□□□□□ -2.62
PRPF38AQ8NAV1 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.31□□□□□ -2.62
PRPF38AQ8NAV1 AC013734.1-201ENST00000619329 111 ntBASIC-1.31□□□□□ -2.62
PRPF38AQ8NAV1 RNA5SP405-201ENST00000363059 114 ntBASIC-1.32□□□□□ -2.62
PRPF38AQ8NAV1 MIR548AA1-201ENST00000384971 97 ntBASIC-1.32□□□□□ -2.62
PRPF38AQ8NAV1 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.32□□□□□ -2.62
PRPF38AQ8NAV1 RNU6-247P-201ENST00000362636 107 ntBASIC-1.33□□□□□ -2.62
PRPF38AQ8NAV1 RNU6-194P-201ENST00000363862 105 ntBASIC-1.33□□□□□ -2.62
PRPF38AQ8NAV1 SNORD115-31-201ENST00000365318 82 ntBASIC-1.33□□□□□ -2.62
PRPF38AQ8NAV1 MIR1255A-201ENST00000408338 113 ntBASIC-1.33□□□□□ -2.62
PRPF38AQ8NAV1 RNU6-857P-201ENST00000515893 110 ntBASIC-1.33□□□□□ -2.62
PRPF38AQ8NAV1 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.33□□□□□ -2.62
PRPF38AQ8NAV1 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.34□□□□□ -2.62
PRPF38AQ8NAV1 MIR630-201ENST00000384957 97 ntBASIC-1.34□□□□□ -2.62
PRPF38AQ8NAV1 SNORD78.1-201ENST00000390866 65 ntBASIC-1.34□□□□□ -2.62
PRPF38AQ8NAV1 MIR548W-201ENST00000581970 74 ntBASIC-1.34□□□□□ -2.62
PRPF38AQ8NAV1 AC005520.4-201ENST00000604337 90 ntBASIC-1.34□□□□□ -2.62
PRPF38AQ8NAV1 U6.97-201ENST00000636904 101 ntBASIC-1.34□□□□□ -2.62
PRPF38AQ8NAV1 snoU13.10-201ENST00000459301 103 ntBASIC-1.35□□□□□ -2.63
PRPF38AQ8NAV1 RNU6-118P-201ENST00000516552 102 ntBASIC-1.35□□□□□ -2.63
PRPF38AQ8NAV1 SNORD54-201ENST00000459159 67 ntBASIC-1.36□□□□□ -2.63
PRPF38AQ8NAV1 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.36□□□□□ -2.63
PRPF38AQ8NAV1 SNORA27.2-201ENST00000363365 126 ntBASIC-1.37□□□□□ -2.63
PRPF38AQ8NAV1 SNORD116-16-201ENST00000384533 92 ntBASIC-1.37□□□□□ -2.63
PRPF38AQ8NAV1 SNORD116-24-201ENST00000384549 92 ntBASIC-1.37□□□□□ -2.63
PRPF38AQ8NAV1 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.37□□□□□ -2.63
PRPF38AQ8NAV1 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.37□□□□□ -2.63
PRPF38AQ8NAV1 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.37□□□□□ -2.63
PRPF38AQ8NAV1 SNORD1B-201ENST00000363091 84 ntBASIC-1.38□□□□□ -2.63
PRPF38AQ8NAV1 MIR3139-201ENST00000579145 76 ntBASIC-1.38□□□□□ -2.63
PRPF38AQ8NAV1 MIR466-201ENST00000580653 84 ntBASIC-1.38□□□□□ -2.63
PRPF38AQ8NAV1 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.38□□□□□ -2.63
PRPF38AQ8NAV1 RNU6-669P-201ENST00000365575 107 ntBASIC-1.39□□□□□ -2.63
PRPF38AQ8NAV1 SNORA41B-201ENST00000384785 128 ntBASIC-1.39□□□□□ -2.63
PRPF38AQ8NAV1 RNY3P8-201ENST00000411366 126 ntBASIC-1.39□□□□□ -2.63
PRPF38AQ8NAV1 RNU6-634P-201ENST00000459134 106 ntBASIC-1.39□□□□□ -2.63
PRPF38AQ8NAV1 RNU6-871P-201ENST00000516122 100 ntBASIC-1.39□□□□□ -2.63
PRPF38AQ8NAV1 SNORD63.2-201ENST00000516303 64 ntBASIC-1.39□□□□□ -2.63
PRPF38AQ8NAV1 RNU7-151P-201ENST00000516930 53 ntBASIC-1.39□□□□□ -2.63
PRPF38AQ8NAV1 MIR4748-201ENST00000578076 82 ntBASIC-1.39□□□□□ -2.63
PRPF38AQ8NAV1 MIR4679-1-201ENST00000637619 75 ntBASIC-1.39□□□□□ -2.63
PRPF38AQ8NAV1 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.4□□□□□ -2.63
PRPF38AQ8NAV1 RNU6-995P-201ENST00000391244 107 ntBASIC-1.4□□□□□ -2.63
PRPF38AQ8NAV1 RNU6-542P-201ENST00000516405 103 ntBASIC-1.4□□□□□ -2.63
PRPF38AQ8NAV1 MIR579-201ENST00000385221 98 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 259.3 ms