Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 MIR548BB-201ENST00000626714 66 ntBASIC-1.55□□□□□ -2.66
CACNA1BQ00975 MIR450A1-201ENST00000362262 91 ntBASIC-1.56□□□□□ -2.66
CACNA1BQ00975 MIR579-201ENST00000385221 98 ntBASIC-1.56□□□□□ -2.66
CACNA1BQ00975 SNORA27.2-201ENST00000363365 126 ntBASIC-1.56□□□□□ -2.66
CACNA1BQ00975 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.57□□□□□ -2.66
CACNA1BQ00975 MIR154-201ENST00000385243 84 ntBASIC-1.57□□□□□ -2.66
CACNA1BQ00975 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.57□□□□□ -2.66
CACNA1BQ00975 RNU6-523P-201ENST00000516304 54 ntBASIC-1.57□□□□□ -2.66
CACNA1BQ00975 RNU6-542P-201ENST00000516405 103 ntBASIC-1.57□□□□□ -2.66
CACNA1BQ00975 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.57□□□□□ -2.66
CACNA1BQ00975 RNU6-649P-201ENST00000384463 107 ntBASIC-1.57□□□□□ -2.66
CACNA1BQ00975 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.57□□□□□ -2.66
CACNA1BQ00975 MIR4484-201ENST00000582855 83 ntBASIC-1.57□□□□□ -2.66
CACNA1BQ00975 RNU6-70P-201ENST00000516438 60 ntBASIC-1.58□□□□□ -2.66
CACNA1BQ00975 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.58□□□□□ -2.66
CACNA1BQ00975 MALAT1.1-201ENST00000618249 95 ntBASIC-1.58□□□□□ -2.66
CACNA1BQ00975 MIR7978-201ENST00000636158 59 ntBASIC-1.58□□□□□ -2.66
CACNA1BQ00975 RNU6-219P-201ENST00000364728 107 ntBASIC-1.58□□□□□ -2.66
CACNA1BQ00975 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.58□□□□□ -2.66
CACNA1BQ00975 MIR509-1-201ENST00000385265 94 ntBASIC-1.58□□□□□ -2.66
CACNA1BQ00975 MIR509-2-201ENST00000390724 91 ntBASIC-1.58□□□□□ -2.66
CACNA1BQ00975 RNU6-380P-201ENST00000410207 107 ntBASIC-1.58□□□□□ -2.66
CACNA1BQ00975 RNU6-974P-201ENST00000384099 108 ntBASIC-1.59□□□□□ -2.66
CACNA1BQ00975 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.59□□□□□ -2.66
CACNA1BQ00975 RNU6-315P-201ENST00000362666 107 ntBASIC-1.6□□□□□ -2.66
CACNA1BQ00975 RNU6-209P-201ENST00000384118 107 ntBASIC-1.6□□□□□ -2.66
CACNA1BQ00975 RNU6-675P-201ENST00000384236 104 ntBASIC-1.6□□□□□ -2.66
CACNA1BQ00975 RNU6-844P-201ENST00000517175 102 ntBASIC-1.6□□□□□ -2.67
CACNA1BQ00975 RNU6-92P-201ENST00000605893 104 ntBASIC-1.6□□□□□ -2.67
CACNA1BQ00975 AL365222.1-201ENST00000614661 98 ntBASIC-1.6□□□□□ -2.67
CACNA1BQ00975 FTX_4.1-201ENST00000616291 147 ntBASIC-1.61□□□□□ -2.67
CACNA1BQ00975 MIR379-201ENST00000362218 67 ntBASIC-1.61□□□□□ -2.67
CACNA1BQ00975 RNY1P1-201ENST00000364372 112 ntBASIC-1.61□□□□□ -2.67
CACNA1BQ00975 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.61□□□□□ -2.67
CACNA1BQ00975 AC013734.1-201ENST00000619329 111 ntBASIC-1.61□□□□□ -2.67
CACNA1BQ00975 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.62□□□□□ -2.67
CACNA1BQ00975 MIR548N-201ENST00000408742 75 ntBASIC-1.62□□□□□ -2.67
CACNA1BQ00975 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.62□□□□□ -2.67
CACNA1BQ00975 RNU6-794P-201ENST00000517261 64 ntBASIC-1.62□□□□□ -2.67
CACNA1BQ00975 MIR548W-201ENST00000581970 74 ntBASIC-1.62□□□□□ -2.67
CACNA1BQ00975 RNY4P9-201ENST00000363194 97 ntBASIC-1.62□□□□□ -2.67
CACNA1BQ00975 RNU6-979P-201ENST00000383896 107 ntBASIC-1.62□□□□□ -2.67
CACNA1BQ00975 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.62□□□□□ -2.67
CACNA1BQ00975 RNU6-172P-201ENST00000411000 93 ntBASIC-1.63□□□□□ -2.67
CACNA1BQ00975 SNORD60.1-201ENST00000362451 73 ntBASIC-1.63□□□□□ -2.67
CACNA1BQ00975 RNU7-160P-201ENST00000516660 62 ntBASIC-1.63□□□□□ -2.67
CACNA1BQ00975 RNY3P8-201ENST00000411366 126 ntBASIC-1.64□□□□□ -2.67
CACNA1BQ00975 RNU6-895P-201ENST00000384125 103 ntBASIC-1.65□□□□□ -2.67
CACNA1BQ00975 RNU6-22P-201ENST00000384355 107 ntBASIC-1.65□□□□□ -2.67
CACNA1BQ00975 AC090425.1-201ENST00000610007 140 ntBASIC-1.65□□□□□ -2.67
CACNA1BQ00975 SNORA63.4-201ENST00000362763 126 ntBASIC-1.66□□□□□ -2.67
CACNA1BQ00975 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.66□□□□□ -2.67
CACNA1BQ00975 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.66□□□□□ -2.67
CACNA1BQ00975 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.66□□□□□ -2.67
CACNA1BQ00975 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.66□□□□□ -2.67
CACNA1BQ00975 SNORD60-201ENST00000383903 83 ntBASIC-1.66□□□□□ -2.68
CACNA1BQ00975 MIR7110-201ENST00000612638 86 ntBASIC-1.66□□□□□ -2.68
CACNA1BQ00975 RNU6-789P-201ENST00000517105 102 ntBASIC-1.67□□□□□ -2.68
CACNA1BQ00975 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.67□□□□□ -2.68
CACNA1BQ00975 MIR3133-201ENST00000583157 78 ntBASIC-1.67□□□□□ -2.68
CACNA1BQ00975 RNU6-361P-201ENST00000364454 107 ntBASIC-1.68□□□□□ -2.68
CACNA1BQ00975 SNORD116.2-201ENST00000391251 93 ntBASIC-1.68□□□□□ -2.68
CACNA1BQ00975 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.68□□□□□ -2.68
CACNA1BQ00975 MIR581-201ENST00000384895 96 ntBASIC-1.68□□□□□ -2.68
CACNA1BQ00975 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.68□□□□□ -2.68
CACNA1BQ00975 AC097484.2-201ENST00000509147 251 ntBASIC-1.68□□□□□ -2.68
CACNA1BQ00975 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.69□□□□□ -2.68
CACNA1BQ00975 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.69□□□□□ -2.68
CACNA1BQ00975 MIR548AI-201ENST00000579940 88 ntBASIC-1.69□□□□□ -2.68
CACNA1BQ00975 RNU6-834P-201ENST00000362367 110 ntBASIC-1.69□□□□□ -2.68
CACNA1BQ00975 RNU7-171P-201ENST00000459581 62 ntBASIC-1.69□□□□□ -2.68
CACNA1BQ00975 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.69□□□□□ -2.68
CACNA1BQ00975 SNORD115-31-201ENST00000365318 82 ntBASIC-1.7□□□□□ -2.68
CACNA1BQ00975 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.7□□□□□ -2.68
CACNA1BQ00975 MIR5588-201ENST00000581890 63 ntBASIC-1.7□□□□□ -2.68
CACNA1BQ00975 RNU6-520P-201ENST00000384717 104 ntBASIC-1.71□□□□□ -2.68
CACNA1BQ00975 AC099654.10-201ENST00000640395 161 ntBASIC-1.71□□□□□ -2.68
CACNA1BQ00975 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.72□□□□□ -2.69
CACNA1BQ00975 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.72□□□□□ -2.69
CACNA1BQ00975 MIR202-201ENST00000362219 110 ntBASIC-1.73□□□□□ -2.69
CACNA1BQ00975 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.73□□□□□ -2.69
CACNA1BQ00975 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.73□□□□□ -2.69
CACNA1BQ00975 RNU6-640P-201ENST00000363693 105 ntBASIC-1.73□□□□□ -2.69
CACNA1BQ00975 RNU6-828P-201ENST00000364876 107 ntBASIC-1.73□□□□□ -2.69
CACNA1BQ00975 SNORD116-24-201ENST00000384549 92 ntBASIC-1.73□□□□□ -2.69
CACNA1BQ00975 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.73□□□□□ -2.69
CACNA1BQ00975 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.73□□□□□ -2.69
CACNA1BQ00975 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.73□□□□□ -2.69
CACNA1BQ00975 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.73□□□□□ -2.69
CACNA1BQ00975 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.73□□□□□ -2.69
CACNA1BQ00975 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.73□□□□□ -2.69
CACNA1BQ00975 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.74□□□□□ -2.69
CACNA1BQ00975 SNORA17.4-201ENST00000391287 132 ntBASIC-1.74□□□□□ -2.69
CACNA1BQ00975 SNORD45.2-201ENST00000363552 72 ntBASIC-1.75□□□□□ -2.69
CACNA1BQ00975 RNU6-810P-201ENST00000364001 107 ntBASIC-1.75□□□□□ -2.69
CACNA1BQ00975 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.75□□□□□ -2.69
CACNA1BQ00975 SNORA40B-201ENST00000385573 128 ntBASIC-1.75□□□□□ -2.69
CACNA1BQ00975 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.75□□□□□ -2.69
CACNA1BQ00975 RNU6-912P-201ENST00000363800 104 ntBASIC-1.75□□□□□ -2.69
CACNA1BQ00975 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms