Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.78□□□□□ -2.69
HOXC5Q00444 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.78□□□□□ -2.69
HOXC5Q00444 RNU6-520P-201ENST00000384717 104 ntBASIC-1.79□□□□□ -2.7
HOXC5Q00444 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.79□□□□□ -2.7
HOXC5Q00444 RNU6-70P-201ENST00000516438 60 ntBASIC-1.79□□□□□ -2.7
HOXC5Q00444 MIR5588-201ENST00000581890 63 ntBASIC-1.79□□□□□ -2.7
HOXC5Q00444 MIR4712-201ENST00000583750 82 ntBASIC-1.79□□□□□ -2.7
HOXC5Q00444 RNU6-92P-201ENST00000605893 104 ntBASIC-1.79□□□□□ -2.7
HOXC5Q00444 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.79□□□□□ -2.7
HOXC5Q00444 RNU6-979P-201ENST00000383896 107 ntBASIC-1.8□□□□□ -2.7
HOXC5Q00444 RNU6-895P-201ENST00000384125 103 ntBASIC-1.8□□□□□ -2.7
HOXC5Q00444 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.8□□□□□ -2.7
HOXC5Q00444 MIR548N-201ENST00000408742 75 ntBASIC-1.8□□□□□ -2.7
HOXC5Q00444 RNU6-542P-201ENST00000516405 103 ntBASIC-1.8□□□□□ -2.7
HOXC5Q00444 MIR202-201ENST00000362219 110 ntBASIC-1.81□□□□□ -2.7
HOXC5Q00444 RNY1P1-201ENST00000364372 112 ntBASIC-1.81□□□□□ -2.7
HOXC5Q00444 RNU6-828P-201ENST00000364876 107 ntBASIC-1.81□□□□□ -2.7
HOXC5Q00444 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.81□□□□□ -2.7
HOXC5Q00444 RNU6-32P-201ENST00000383948 107 ntBASIC-1.81□□□□□ -2.7
HOXC5Q00444 RNU6-13P-201ENST00000384248 107 ntBASIC-1.81□□□□□ -2.7
HOXC5Q00444 RNU6-12P-201ENST00000384604 107 ntBASIC-1.81□□□□□ -2.7
HOXC5Q00444 RNU6-41P-201ENST00000384741 107 ntBASIC-1.81□□□□□ -2.7
HOXC5Q00444 RNU6-118P-201ENST00000516552 102 ntBASIC-1.81□□□□□ -2.7
HOXC5Q00444 U4.2-201ENST00000618561 85 ntBASIC-1.81□□□□□ -2.7
HOXC5Q00444 SNORD60.1-201ENST00000362451 73 ntBASIC-1.82□□□□□ -2.7
HOXC5Q00444 RNU6-194P-201ENST00000363862 105 ntBASIC-1.82□□□□□ -2.7
HOXC5Q00444 RNU6-649P-201ENST00000384463 107 ntBASIC-1.82□□□□□ -2.7
HOXC5Q00444 MIR7110-201ENST00000612638 86 ntBASIC-1.82□□□□□ -2.7
HOXC5Q00444 MIR1245B-201ENST00000636115 69 ntBASIC-1.82□□□□□ -2.7
HOXC5Q00444 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.83□□□□□ -2.7
HOXC5Q00444 RNU6-810P-201ENST00000364001 107 ntBASIC-1.83□□□□□ -2.7
HOXC5Q00444 SNORD60-201ENST00000383903 83 ntBASIC-1.83□□□□□ -2.7
HOXC5Q00444 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.83□□□□□ -2.7
HOXC5Q00444 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.83□□□□□ -2.7
HOXC5Q00444 RNU6-231P-201ENST00000517122 103 ntBASIC-1.83□□□□□ -2.7
HOXC5Q00444 MIR3134-201ENST00000579433 74 ntBASIC-1.83□□□□□ -2.7
HOXC5Q00444 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.84□□□□□ -2.7
HOXC5Q00444 SNORD114-3-201ENST00000364969 75 ntBASIC-1.84□□□□□ -2.7
HOXC5Q00444 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.84□□□□□ -2.7
HOXC5Q00444 RNU6-313P-201ENST00000516317 112 ntBASIC-1.84□□□□□ -2.7
HOXC5Q00444 RNU6-687P-201ENST00000516443 89 ntBASIC-1.84□□□□□ -2.7
HOXC5Q00444 MIR4748-201ENST00000578076 82 ntBASIC-1.84□□□□□ -2.7
HOXC5Q00444 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.85□□□□□ -2.71
HOXC5Q00444 RNU6-147P-201ENST00000383983 107 ntBASIC-1.85□□□□□ -2.71
HOXC5Q00444 RNU7-171P-201ENST00000459581 62 ntBASIC-1.85□□□□□ -2.71
HOXC5Q00444 AC097484.2-201ENST00000509147 251 ntBASIC-1.85□□□□□ -2.71
HOXC5Q00444 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.85□□□□□ -2.71
HOXC5Q00444 MIR466-201ENST00000580653 84 ntBASIC-1.85□□□□□ -2.71
HOXC5Q00444 IGLL4P-201ENST00000614590 133 ntBASIC-1.85□□□□□ -2.71
HOXC5Q00444 RNU6-49P-201ENST00000384256 107 ntBASIC-1.86□□□□□ -2.71
HOXC5Q00444 FTX_4.1-201ENST00000616291 147 ntBASIC-1.86□□□□□ -2.71
HOXC5Q00444 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.87□□□□□ -2.71
HOXC5Q00444 RNU6-361P-201ENST00000364454 107 ntBASIC-1.87□□□□□ -2.71
HOXC5Q00444 SNORD116.2-201ENST00000391251 93 ntBASIC-1.87□□□□□ -2.71
HOXC5Q00444 SNORA17.4-201ENST00000391287 132 ntBASIC-1.87□□□□□ -2.71
HOXC5Q00444 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.87□□□□□ -2.71
HOXC5Q00444 AL627230.5-201ENST00000619807 58 ntBASIC-1.87□□□□□ -2.71
HOXC5Q00444 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.88□□□□□ -2.71
HOXC5Q00444 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.89□□□□□ -2.71
HOXC5Q00444 SNORA40B-201ENST00000385573 128 ntBASIC-1.89□□□□□ -2.71
HOXC5Q00444 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.89□□□□□ -2.71
HOXC5Q00444 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.89□□□□□ -2.71
HOXC5Q00444 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.89□□□□□ -2.71
HOXC5Q00444 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.89□□□□□ -2.71
HOXC5Q00444 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.89□□□□□ -2.71
HOXC5Q00444 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.89□□□□□ -2.71
HOXC5Q00444 RNU6-68P-201ENST00000516576 104 ntBASIC-1.9□□□□□ -2.71
HOXC5Q00444 SNORA40.16-201ENST00000517238 121 ntBASIC-1.9□□□□□ -2.71
HOXC5Q00444 MIR3139-201ENST00000579145 76 ntBASIC-1.9□□□□□ -2.71
HOXC5Q00444 RNY4P27-201ENST00000363341 96 ntBASIC-1.91□□□□□ -2.72
HOXC5Q00444 SNORD113-3-201ENST00000364830 72 ntBASIC-1.92□□□□□ -2.72
HOXC5Q00444 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.92□□□□□ -2.72
HOXC5Q00444 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.92□□□□□ -2.72
HOXC5Q00444 snosnR66.1-201ENST00000391095 99 ntBASIC-1.92□□□□□ -2.72
HOXC5Q00444 RNU6-530P-201ENST00000391180 107 ntBASIC-1.92□□□□□ -2.72
HOXC5Q00444 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.93□□□□□ -2.72
HOXC5Q00444 RNU6-122P-201ENST00000516818 107 ntBASIC-1.93□□□□□ -2.72
HOXC5Q00444 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.93□□□□□ -2.72
HOXC5Q00444 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.94□□□□□ -2.72
HOXC5Q00444 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.94□□□□□ -2.72
HOXC5Q00444 SNORA25.5-201ENST00000363782 126 ntBASIC-1.95□□□□□ -2.72
HOXC5Q00444 AL451105.1-201ENST00000450005 189 ntBASIC-1.95□□□□□ -2.72
HOXC5Q00444 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.95□□□□□ -2.72
HOXC5Q00444 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.95□□□□□ -2.72
HOXC5Q00444 SNORD113-1-201ENST00000365321 69 ntBASIC-1.96□□□□□ -2.72
HOXC5Q00444 RNU6-411P-201ENST00000384451 107 ntBASIC-1.96□□□□□ -2.72
HOXC5Q00444 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.96□□□□□ -2.72
HOXC5Q00444 RNU6-634P-201ENST00000459134 106 ntBASIC-1.96□□□□□ -2.72
HOXC5Q00444 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.96□□□□□ -2.72
HOXC5Q00444 MIR4426-201ENST00000640330 63 ntBASIC-1.96□□□□□ -2.72
HOXC5Q00444 RNU6-215P-201ENST00000365169 102 ntBASIC-1.97□□□□□ -2.72
HOXC5Q00444 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.97□□□□□ -2.72
HOXC5Q00444 MT-TM-201ENST00000387377 68 ntBASIC-1.97□□□□□ -2.72
HOXC5Q00444 MIR4666B-201ENST00000578142 81 ntBASIC-1.97□□□□□ -2.72
HOXC5Q00444 MIR494-201ENST00000349529 81 ntBASIC-1.98□□□□□ -2.73
HOXC5Q00444 MIR379-201ENST00000362218 67 ntBASIC-1.98□□□□□ -2.73
HOXC5Q00444 RNU6-912P-201ENST00000363800 104 ntBASIC-1.98□□□□□ -2.73
HOXC5Q00444 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.98□□□□□ -2.73
HOXC5Q00444 RNU6-787P-201ENST00000384032 107 ntBASIC-1.98□□□□□ -2.73
HOXC5Q00444 MIR548M-201ENST00000408260 86 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms