Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SNORD116-22-201ENST00000384430 92 ntBASIC-7.98□□□□□ -3.69
RPL39P62891 SNORD116-29-201ENST00000384516 83 ntBASIC-7.98□□□□□ -3.69
RPL39P62891 MTND4LP32-201ENST00000636111 270 ntBASIC-7.98□□□□□ -3.69
RPL39P62891 Y_RNA.277-201ENST00000364754 102 ntBASIC-7.99□□□□□ -3.69
RPL39P62891 MTATP6P25-201ENST00000574491 261 ntBASIC-7.99□□□□□ -3.69
RPL39P62891 RNU6-1107P-201ENST00000364817 104 ntBASIC-8□□□□□ -3.69
RPL39P62891 SNORA40.4-201ENST00000390971 128 ntBASIC-8□□□□□ -3.69
RPL39P62891 RNU6-956P-201ENST00000458868 103 ntBASIC-8□□□□□ -3.69
RPL39P62891 AC113139.1-201ENST00000605049 239 ntBASIC-8.01□□□□□ -3.69
RPL39P62891 DLEU2_1.1-201ENST00000612089 120 ntBASIC-8.01□□□□□ -3.69
RPL39P62891 Y_RNA.210-201ENST00000364161 110 ntBASIC-8.02□□□□□ -3.69
RPL39P62891 RNU7-152P-201ENST00000458982 64 ntBASIC-8.02□□□□□ -3.69
RPL39P62891 RNU6-255P-201ENST00000516957 105 ntBASIC-8.03□□□□□ -3.69
RPL39P62891 Y_RNA.818-201ENST00000618813 71 ntBASIC-8.03□□□□□ -3.69
RPL39P62891 RNY4P14-201ENST00000363656 96 ntBASIC-8.05□□□□□ -3.7
RPL39P62891 SNORD116-4-201ENST00000384733 96 ntBASIC-8.05□□□□□ -3.7
RPL39P62891 Y_RNA.611-201ENST00000410682 108 ntBASIC-8.05□□□□□ -3.7
RPL39P62891 RNU6-687P-201ENST00000516443 89 ntBASIC-8.05□□□□□ -3.7
RPL39P62891 AC006160.2-201ENST00000637708 154 ntBASIC-8.06□□□□□ -3.7
RPL39P62891 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-8.07□□□□□ -3.7
RPL39P62891 RNU6-1135P-201ENST00000411083 103 ntBASIC-8.1□□□□□ -3.71
RPL39P62891 Y_RNA.58-201ENST00000362807 102 ntBASIC-8.11□□□□□ -3.71
RPL39P62891 SNORA25.4-201ENST00000363666 124 ntBASIC-8.11□□□□□ -3.71
RPL39P62891 Y_RNA.194-201ENST00000363985 102 ntBASIC-8.11□□□□□ -3.71
RPL39P62891 Y_RNA.573-201ENST00000384763 105 ntBASIC-8.11□□□□□ -3.71
RPL39P62891 MIR3611-201ENST00000584484 83 ntBASIC-8.12□□□□□ -3.71
RPL39P62891 RNU6-109P-201ENST00000516364 107 ntBASIC-8.13□□□□□ -3.71
RPL39P62891 RNU6-184P-201ENST00000516514 107 ntBASIC-8.13□□□□□ -3.71
RPL39P62891 RNU6-620P-201ENST00000384017 96 ntBASIC-8.14□□□□□ -3.71
RPL39P62891 RNU6-59P-201ENST00000384787 107 ntBASIC-8.17□□□□□ -3.72
RPL39P62891 MIR1302-5-201ENST00000408164 150 ntBASIC-8.17□□□□□ -3.72
RPL39P62891 AC072026.1-201ENST00000605023 201 ntBASIC-8.17□□□□□ -3.72
RPL39P62891 SNORA19-201ENST00000384737 128 ntBASIC-8.18□□□□□ -3.72
RPL39P62891 RNU6-663P-201ENST00000391105 106 ntBASIC-8.19□□□□□ -3.72
RPL39P62891 AC009094.1-201ENST00000564443 426 ntBASIC-8.19□□□□□ -3.72
RPL39P62891 RNU6-907P-201ENST00000390924 102 ntBASIC-8.21□□□□□ -3.72
RPL39P62891 MIR4511-201ENST00000582784 87 ntBASIC-8.21□□□□□ -3.72
RPL39P62891 SNORD113-1-201ENST00000365321 69 ntBASIC-8.22□□□□□ -3.73
RPL39P62891 RNU4-33P-201ENST00000364316 85 ntBASIC-8.23□□□□□ -3.73
RPL39P62891 DEFB108C-201ENST00000400154 252 ntBASIC-8.23□□□□□ -3.73
RPL39P62891 SNORD33.1-201ENST00000516213 88 ntBASIC-8.23□□□□□ -3.73
RPL39P62891 Y_RNA.607-201ENST00000410597 98 ntBASIC-8.24□□□□□ -3.73
RPL39P62891 MIR3134-201ENST00000579433 74 ntBASIC-8.24□□□□□ -3.73
RPL39P62891 MIR548X2-201ENST00000579776 100 ntBASIC-8.25□□□□□ -3.73
RPL39P62891 AC103706.3-201ENST00000636297 85 ntBASIC-8.25□□□□□ -3.73
RPL39P62891 MIR494-201ENST00000349529 81 ntBASIC-8.26□□□□□ -3.73
RPL39P62891 RNU6-1020P-201ENST00000363684 107 ntBASIC-8.26□□□□□ -3.73
RPL39P62891 Y_RNA.516-201ENST00000384541 124 ntBASIC-8.26□□□□□ -3.73
RPL39P62891 MIR3914-2-201ENST00000637339 95 ntBASIC-8.27□□□□□ -3.73
RPL39P62891 Y_RNA.272-201ENST00000364696 102 ntBASIC-8.28□□□□□ -3.73
RPL39P62891 RNU6-314P-201ENST00000516574 104 ntBASIC-8.29□□□□□ -3.74
RPL39P62891 SNORD11.1-201ENST00000459482 85 ntBASIC-8.3□□□□□ -3.74
RPL39P62891 Y_RNA.553-201ENST00000384670 102 ntBASIC-8.31□□□□□ -3.74
RPL39P62891 AC141273.2-201ENST00000618989 130 ntBASIC-8.31□□□□□ -3.74
RPL39P62891 RNU6-1312P-201ENST00000362425 108 ntBASIC-8.32□□□□□ -3.74
RPL39P62891 RNU6-959P-201ENST00000384671 107 ntBASIC-8.32□□□□□ -3.74
RPL39P62891 Y_RNA.788-201ENST00000622394 112 ntBASIC-8.33□□□□□ -3.74
RPL39P62891 U6.95-201ENST00000636931 70 ntBASIC-8.34□□□□□ -3.74
RPL39P62891 MIR2052-201ENST00000636055 55 ntBASIC-8.36□□□□□ -3.75
RPL39P62891 Y_RNA.197-201ENST00000364004 102 ntBASIC-8.37□□□□□ -3.75
RPL39P62891 Y_RNA.273-201ENST00000364703 102 ntBASIC-8.37□□□□□ -3.75
RPL39P62891 RNU6-634P-201ENST00000459134 106 ntBASIC-8.38□□□□□ -3.75
RPL39P62891 AC113195.1-201ENST00000579952 141 ntBASIC-8.38□□□□□ -3.75
RPL39P62891 Y_RNA.316-201ENST00000365118 111 ntBASIC-8.39□□□□□ -3.75
RPL39P62891 AC022559.1-201ENST00000520905 205 ntBASIC-8.39□□□□□ -3.75
RPL39P62891 RNU6-986P-201ENST00000363133 102 ntBASIC-8.4□□□□□ -3.75
RPL39P62891 RNU7-107P-201ENST00000459121 61 ntBASIC-8.41□□□□□ -3.76
RPL39P62891 RNU6-506P-201ENST00000516553 94 ntBASIC-8.41□□□□□ -3.76
RPL39P62891 RNU6-675P-201ENST00000384236 104 ntBASIC-8.42□□□□□ -3.76
RPL39P62891 AC006362.1-201ENST00000567392 174 ntBASIC-8.42□□□□□ -3.76
RPL39P62891 Y_RNA.712-201ENST00000517011 92 ntBASIC-8.43□□□□□ -3.76
RPL39P62891 Y_RNA.70-201ENST00000362886 110 ntBASIC-8.44□□□□□ -3.76
RPL39P62891 MIR4712-201ENST00000583750 82 ntBASIC-8.45□□□□□ -3.76
RPL39P62891 RNU6-713P-201ENST00000384761 107 ntBASIC-8.46□□□□□ -3.76
RPL39P62891 SNORA33.2-201ENST00000365413 134 ntBASIC-8.47□□□□□ -3.77
RPL39P62891 MIR569-201ENST00000385228 96 ntBASIC-8.47□□□□□ -3.77
RPL39P62891 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-8.47□□□□□ -3.77
RPL39P62891 SNORD116-21-201ENST00000384507 92 ntBASIC-8.49□□□□□ -3.77
RPL39P62891 Y_RNA.580-201ENST00000391004 95 ntBASIC-8.5□□□□□ -3.77
RPL39P62891 RNU6-838P-201ENST00000363399 108 ntBASIC-8.51□□□□□ -3.77
RPL39P62891 AC114801.3-201ENST00000510231 177 ntBASIC-8.51□□□□□ -3.77
RPL39P62891 SNORD19B-201ENST00000459623 84 ntBASIC-8.52□□□□□ -3.77
RPL39P62891 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-8.52□□□□□ -3.77
RPL39P62891 MIR4679-1-201ENST00000637619 75 ntBASIC-8.53□□□□□ -3.77
RPL39P62891 RNU6-209P-201ENST00000384118 107 ntBASIC-8.54□□□□□ -3.78
RPL39P62891 RNU4-71P-201ENST00000516258 113 ntBASIC-8.54□□□□□ -3.78
RPL39P62891 RNU6-277P-201ENST00000516272 106 ntBASIC-8.54□□□□□ -3.78
RPL39P62891 SNORD30.1-201ENST00000391309 70 ntBASIC-8.55□□□□□ -3.78
RPL39P62891 AC110620.1-201ENST00000416042 228 ntBASIC-8.56□□□□□ -3.78
RPL39P62891 MIR1245B-201ENST00000636115 69 ntBASIC-8.56□□□□□ -3.78
RPL39P62891 AC004792.1-201ENST00000614523 137 ntBASIC-8.58□□□□□ -3.78
RPL39P62891 MTND4LP9-201ENST00000427694 174 ntBASIC-8.59□□□□□ -3.78
RPL39P62891 MIR3688-2-201ENST00000636963 87 ntBASIC-8.59□□□□□ -3.78
RPL39P62891 SNORD116-18-201ENST00000383961 92 ntBASIC-8.6□□□□□ -3.79
RPL39P62891 Y_RNA.554-201ENST00000384672 102 ntBASIC-8.6□□□□□ -3.79
RPL39P62891 Y_RNA.379-201ENST00000365653 102 ntBASIC-8.61□□□□□ -3.79
RPL39P62891 MALAT1.1-201ENST00000618249 95 ntBASIC-8.62□□□□□ -3.79
RPL39P62891 RNU6-446P-201ENST00000362827 106 ntBASIC-8.63□□□□□ -3.79
RPL39P62891 Y_RNA.20-201ENST00000362479 113 ntBASIC-8.67□□□□□ -3.8
RPL39P62891 Y_RNA.200-201ENST00000364018 102 ntBASIC-8.68□□□□□ -3.8
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms