Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNU6-226P-201ENST00000363778 107 ntBASIC-1.22□□□□□ -2.6
PDX1P52945 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.22□□□□□ -2.6
PDX1P52945 RNU6-563P-201ENST00000364872 108 ntBASIC-1.22□□□□□ -2.6
PDX1P52945 MIR548AA1-201ENST00000384971 97 ntBASIC-1.22□□□□□ -2.6
PDX1P52945 MIR601-201ENST00000385256 79 ntBASIC-1.22□□□□□ -2.6
PDX1P52945 MIR1255A-201ENST00000408338 113 ntBASIC-1.22□□□□□ -2.6
PDX1P52945 RNA5SP180-201ENST00000516181 101 ntBASIC-1.22□□□□□ -2.6
PDX1P52945 RNU6-400P-201ENST00000391173 106 ntBASIC-1.23□□□□□ -2.61
PDX1P52945 MIR1285-2-201ENST00000408311 88 ntBASIC-1.23□□□□□ -2.61
PDX1P52945 RNU6-857P-201ENST00000515893 110 ntBASIC-1.23□□□□□ -2.61
PDX1P52945 MIR7978-201ENST00000636158 59 ntBASIC-1.23□□□□□ -2.61
PDX1P52945 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.24□□□□□ -2.61
PDX1P52945 AC120024.2-201ENST00000576526 175 ntBASIC-1.24□□□□□ -2.61
PDX1P52945 MIR23C-201ENST00000579846 100 ntBASIC-1.25□□□□□ -2.61
PDX1P52945 AC005520.4-201ENST00000604337 90 ntBASIC-1.25□□□□□ -2.61
PDX1P52945 RNU6-974P-201ENST00000384099 108 ntBASIC-1.26□□□□□ -2.61
PDX1P52945 MIR125B1-201ENST00000385236 88 ntBASIC-1.26□□□□□ -2.61
PDX1P52945 RNU6-279P-201ENST00000391297 101 ntBASIC-1.26□□□□□ -2.61
PDX1P52945 RNU6-634P-201ENST00000459134 106 ntBASIC-1.26□□□□□ -2.61
PDX1P52945 RNU7-151P-201ENST00000516930 53 ntBASIC-1.26□□□□□ -2.61
PDX1P52945 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.27□□□□□ -2.61
PDX1P52945 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.27□□□□□ -2.61
PDX1P52945 MIR487B-201ENST00000385021 84 ntBASIC-1.27□□□□□ -2.61
PDX1P52945 MIR1246-201ENST00000636535 73 ntBASIC-1.27□□□□□ -2.61
PDX1P52945 RNU6-669P-201ENST00000365575 107 ntBASIC-1.28□□□□□ -2.61
PDX1P52945 RNU6-540P-201ENST00000384622 101 ntBASIC-1.28□□□□□ -2.61
PDX1P52945 MIR548H1-201ENST00000408610 102 ntBASIC-1.28□□□□□ -2.61
PDX1P52945 RNU6-523P-201ENST00000516304 54 ntBASIC-1.28□□□□□ -2.61
PDX1P52945 AC013734.1-201ENST00000619329 111 ntBASIC-1.28□□□□□ -2.61
PDX1P52945 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.28□□□□□ -2.61
PDX1P52945 MIR4679-1-201ENST00000637619 75 ntBASIC-1.28□□□□□ -2.61
PDX1P52945 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.29□□□□□ -2.62
PDX1P52945 RNU6-695P-201ENST00000391157 104 ntBASIC-1.29□□□□□ -2.62
PDX1P52945 RNA5SP225-201ENST00000410874 135 ntBASIC-1.29□□□□□ -2.62
PDX1P52945 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.3□□□□□ -2.62
PDX1P52945 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.3□□□□□ -2.62
PDX1P52945 SNORD78.1-201ENST00000390866 65 ntBASIC-1.3□□□□□ -2.62
PDX1P52945 MIR1302-4-201ENST00000408701 150 ntBASIC-1.3□□□□□ -2.62
PDX1P52945 RNU6-542P-201ENST00000516405 103 ntBASIC-1.3□□□□□ -2.62
PDX1P52945 MIR365A-201ENST00000362260 87 ntBASIC-1.31□□□□□ -2.62
PDX1P52945 SNORA27.2-201ENST00000363365 126 ntBASIC-1.31□□□□□ -2.62
PDX1P52945 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.31□□□□□ -2.62
PDX1P52945 MIR579-201ENST00000385221 98 ntBASIC-1.31□□□□□ -2.62
PDX1P52945 RNU6-663P-201ENST00000391105 106 ntBASIC-1.31□□□□□ -2.62
PDX1P52945 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.31□□□□□ -2.62
PDX1P52945 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.32□□□□□ -2.62
PDX1P52945 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
PDX1P52945 RNU6-172P-201ENST00000411000 93 ntBASIC-1.32□□□□□ -2.62
PDX1P52945 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.32□□□□□ -2.62
PDX1P52945 MIR3123-201ENST00000583417 75 ntBASIC-1.33□□□□□ -2.62
PDX1P52945 MIR4441-201ENST00000582623 100 ntBASIC-1.34□□□□□ -2.62
PDX1P52945 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.35□□□□□ -2.63
PDX1P52945 SNORD63.2-201ENST00000516303 64 ntBASIC-1.35□□□□□ -2.63
PDX1P52945 RNU6-92P-201ENST00000605893 104 ntBASIC-1.35□□□□□ -2.63
PDX1P52945 SNORD60.1-201ENST00000362451 73 ntBASIC-1.36□□□□□ -2.63
PDX1P52945 RNU6-247P-201ENST00000362636 107 ntBASIC-1.36□□□□□ -2.63
PDX1P52945 MIR581-201ENST00000384895 96 ntBASIC-1.36□□□□□ -2.63
PDX1P52945 RNY3P8-201ENST00000411366 126 ntBASIC-1.37□□□□□ -2.63
PDX1P52945 AC108019.1-201ENST00000512540 175 ntBASIC-1.37□□□□□ -2.63
PDX1P52945 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.38□□□□□ -2.63
PDX1P52945 SNORD18.1-201ENST00000363807 70 ntBASIC-1.38□□□□□ -2.63
PDX1P52945 RNU6-841P-201ENST00000383872 107 ntBASIC-1.38□□□□□ -2.63
PDX1P52945 MIR548AM-201ENST00000584298 74 ntBASIC-1.38□□□□□ -2.63
PDX1P52945 RNU6-995P-201ENST00000391244 107 ntBASIC-1.39□□□□□ -2.63
PDX1P52945 SNORD30.1-201ENST00000391309 70 ntBASIC-1.39□□□□□ -2.63
PDX1P52945 MIR4756-201ENST00000577874 78 ntBASIC-1.39□□□□□ -2.63
PDX1P52945 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.4□□□□□ -2.63
PDX1P52945 RNU7-160P-201ENST00000516660 62 ntBASIC-1.4□□□□□ -2.63
PDX1P52945 SNORA25.4-201ENST00000363666 124 ntBASIC-1.41□□□□□ -2.64
PDX1P52945 RNU6-871P-201ENST00000516122 100 ntBASIC-1.41□□□□□ -2.64
PDX1P52945 MIR548W-201ENST00000581970 74 ntBASIC-1.41□□□□□ -2.64
PDX1P52945 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.42□□□□□ -2.64
PDX1P52945 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.42□□□□□ -2.64
PDX1P52945 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.42□□□□□ -2.64
PDX1P52945 U6.97-201ENST00000636904 101 ntBASIC-1.42□□□□□ -2.64
PDX1P52945 RNU6-810P-201ENST00000364001 107 ntBASIC-1.43□□□□□ -2.64
PDX1P52945 RNU6-983P-201ENST00000516004 103 ntBASIC-1.43□□□□□ -2.64
PDX1P52945 RNU6-231P-201ENST00000517122 103 ntBASIC-1.43□□□□□ -2.64
PDX1P52945 MIR7110-201ENST00000612638 86 ntBASIC-1.43□□□□□ -2.64
PDX1P52945 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.44□□□□□ -2.64
PDX1P52945 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.44□□□□□ -2.64
PDX1P52945 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.44□□□□□ -2.64
PDX1P52945 RNU4-88P-201ENST00000411220 86 ntBASIC-1.44□□□□□ -2.64
PDX1P52945 U4.2-201ENST00000618561 85 ntBASIC-1.44□□□□□ -2.64
PDX1P52945 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.45□□□□□ -2.64
PDX1P52945 RNU6-520P-201ENST00000384717 104 ntBASIC-1.45□□□□□ -2.64
PDX1P52945 SNORA40.16-201ENST00000517238 121 ntBASIC-1.45□□□□□ -2.64
PDX1P52945 SNORD114-3-201ENST00000364969 75 ntBASIC-1.46□□□□□ -2.64
PDX1P52945 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.46□□□□□ -2.64
PDX1P52945 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.46□□□□□ -2.64
PDX1P52945 MIR548N-201ENST00000408742 75 ntBASIC-1.46□□□□□ -2.64
PDX1P52945 snoU13.10-201ENST00000459301 103 ntBASIC-1.46□□□□□ -2.64
PDX1P52945 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.46□□□□□ -2.64
PDX1P52945 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.46□□□□□ -2.64
PDX1P52945 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.46□□□□□ -2.64
PDX1P52945 RNU6-649P-201ENST00000384463 107 ntBASIC-1.47□□□□□ -2.64
PDX1P52945 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.47□□□□□ -2.64
PDX1P52945 RNU6-122P-201ENST00000516818 107 ntBASIC-1.47□□□□□ -2.64
PDX1P52945 MIR664B-201ENST00000626756 61 ntBASIC-1.47□□□□□ -2.64
PDX1P52945 U6.111-201ENST00000636093 83 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms