Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MIR196A2-201ENST00000385189 110 ntBASIC-0.3□□□□□ -2.46
MRE11P49959 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.3□□□□□ -2.46
MRE11P49959 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.3□□□□□ -2.46
MRE11P49959 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.3□□□□□ -2.46
MRE11P49959 MIR7978-201ENST00000636158 59 ntBASIC-0.3□□□□□ -2.46
MRE11P49959 MTND4LP19-201ENST00000403051 166 ntBASIC-0.31□□□□□ -2.46
MRE11P49959 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.32□□□□□ -2.46
MRE11P49959 RNU6-995P-201ENST00000391244 107 ntBASIC-0.32□□□□□ -2.46
MRE11P49959 MIR365A-201ENST00000362260 87 ntBASIC-0.33□□□□□ -2.46
MRE11P49959 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.33□□□□□ -2.46
MRE11P49959 SNORD19-201ENST00000391191 68 ntBASIC-0.33□□□□□ -2.46
MRE11P49959 AP000533.3-201ENST00000447704 118 ntBASIC-0.33□□□□□ -2.46
MRE11P49959 RNA5SP461-201ENST00000516451 104 ntBASIC-0.33□□□□□ -2.46
MRE11P49959 RNU7-160P-201ENST00000516660 62 ntBASIC-0.33□□□□□ -2.46
MRE11P49959 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.34□□□□□ -2.46
MRE11P49959 MIR4490-201ENST00000582647 84 ntBASIC-0.34□□□□□ -2.46
MRE11P49959 MIR4324-201ENST00000584846 72 ntBASIC-0.34□□□□□ -2.46
MRE11P49959 RNU6-10P-201ENST00000384036 107 ntBASIC-0.35□□□□□ -2.47
MRE11P49959 RNU6-614P-201ENST00000384369 107 ntBASIC-0.35□□□□□ -2.47
MRE11P49959 SNORA26.4-201ENST00000391188 123 ntBASIC-0.35□□□□□ -2.47
MRE11P49959 RNU6-721P-201ENST00000410155 105 ntBASIC-0.35□□□□□ -2.47
MRE11P49959 U6.59-201ENST00000615686 107 ntBASIC-0.35□□□□□ -2.47
MRE11P49959 MIR125B1-201ENST00000385236 88 ntBASIC-0.36□□□□□ -2.47
MRE11P49959 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
MRE11P49959 SNORD126-201ENST00000459475 77 ntBASIC-0.36□□□□□ -2.47
MRE11P49959 MIR6738-201ENST00000619620 64 ntBASIC-0.36□□□□□ -2.47
MRE11P49959 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.37□□□□□ -2.47
MRE11P49959 MIR548Q-201ENST00000408404 100 ntBASIC-0.37□□□□□ -2.47
MRE11P49959 RNY4P27-201ENST00000363341 96 ntBASIC-0.38□□□□□ -2.47
MRE11P49959 SNORD115-33-201ENST00000363723 82 ntBASIC-0.38□□□□□ -2.47
MRE11P49959 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.38□□□□□ -2.47
MRE11P49959 SNORD114-17-201ENST00000364699 75 ntBASIC-0.38□□□□□ -2.47
MRE11P49959 MIR3170-201ENST00000582699 77 ntBASIC-0.38□□□□□ -2.47
MRE11P49959 MIR4436A-201ENST00000585278 85 ntBASIC-0.38□□□□□ -2.47
MRE11P49959 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.39□□□□□ -2.47
MRE11P49959 AC021146.6-201ENST00000514659 117 ntBASIC-0.39□□□□□ -2.47
MRE11P49959 RNU6-284P-201ENST00000411105 106 ntBASIC-0.4□□□□□ -2.47
MRE11P49959 AL353691.2-201ENST00000443795 59 ntBASIC-0.4□□□□□ -2.47
MRE11P49959 SCARNA17-201ENST00000516183 144 ntBASIC-0.4□□□□□ -2.47
MRE11P49959 SNORD14C-201ENST00000365382 88 ntBASIC-0.41□□□□□ -2.48
MRE11P49959 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.41□□□□□ -2.48
MRE11P49959 AP002795.1-201ENST00000534879 84 ntBASIC-0.41□□□□□ -2.48
MRE11P49959 RNU6-828P-201ENST00000364876 107 ntBASIC-0.43□□□□□ -2.48
MRE11P49959 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.43□□□□□ -2.48
MRE11P49959 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.43□□□□□ -2.48
MRE11P49959 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.44□□□□□ -2.48
MRE11P49959 MIR196A1-201ENST00000388006 70 ntBASIC-0.44□□□□□ -2.48
MRE11P49959 MIR3115-201ENST00000577915 68 ntBASIC-0.44□□□□□ -2.48
MRE11P49959 MIR4441-201ENST00000582623 100 ntBASIC-0.44□□□□□ -2.48
MRE11P49959 MIR5683-201ENST00000636514 76 ntBASIC-0.44□□□□□ -2.48
MRE11P49959 RNU6-247P-201ENST00000362636 107 ntBASIC-0.45□□□□□ -2.48
MRE11P49959 MIR520D-201ENST00000385002 87 ntBASIC-0.45□□□□□ -2.48
MRE11P49959 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.46□□□□□ -2.48
MRE11P49959 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.46□□□□□ -2.48
MRE11P49959 SNORA3B-201ENST00000391305 131 ntBASIC-0.46□□□□□ -2.48
MRE11P49959 MIR548X-201ENST00000580069 75 ntBASIC-0.46□□□□□ -2.48
MRE11P49959 SNORD114-14-201ENST00000362723 75 ntBASIC-0.47□□□□□ -2.48
MRE11P49959 RNU6-419P-201ENST00000517030 63 ntBASIC-0.47□□□□□ -2.48
MRE11P49959 SNORD63.2-201ENST00000516303 64 ntBASIC-0.48□□□□□ -2.49
MRE11P49959 RNY4P7-201ENST00000364600 96 ntBASIC-0.49□□□□□ -2.49
MRE11P49959 RNU6-974P-201ENST00000384099 108 ntBASIC-0.49□□□□□ -2.49
MRE11P49959 RNU6-936P-201ENST00000384005 107 ntBASIC-0.5□□□□□ -2.49
MRE11P49959 RNU6-987P-201ENST00000384759 104 ntBASIC-0.5□□□□□ -2.49
MRE11P49959 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
MRE11P49959 RNU6-980P-201ENST00000516925 103 ntBASIC-0.5□□□□□ -2.49
MRE11P49959 MIR1285-2-201ENST00000408311 88 ntBASIC-0.51□□□□□ -2.49
MRE11P49959 Y_RNA.722-201ENST00000517279 114 ntBASIC-0.51□□□□□ -2.49
MRE11P49959 RNU6-258P-201ENST00000390884 101 ntBASIC-0.52□□□□□ -2.49
MRE11P49959 RNU4-37P-201ENST00000410214 84 ntBASIC-0.52□□□□□ -2.49
MRE11P49959 RNA5SP180-201ENST00000516181 101 ntBASIC-0.52□□□□□ -2.49
MRE11P49959 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.52□□□□□ -2.49
MRE11P49959 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.53□□□□□ -2.49
MRE11P49959 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.54□□□□□ -2.5
MRE11P49959 SNORD83B-201ENST00000386745 93 ntBASIC-0.54□□□□□ -2.5
MRE11P49959 RNU4-33P-201ENST00000364316 85 ntBASIC-0.55□□□□□ -2.5
MRE11P49959 RNU6-608P-201ENST00000383927 104 ntBASIC-0.55□□□□□ -2.5
MRE11P49959 AL451105.1-201ENST00000450005 189 ntBASIC-0.55□□□□□ -2.5
MRE11P49959 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.55□□□□□ -2.5
MRE11P49959 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.56□□□□□ -2.5
MRE11P49959 RNU6-808P-201ENST00000391233 108 ntBASIC-0.56□□□□□ -2.5
MRE11P49959 RNU6-431P-201ENST00000383874 107 ntBASIC-0.57□□□□□ -2.5
MRE11P49959 MIR507-201ENST00000385234 94 ntBASIC-0.57□□□□□ -2.5
MRE11P49959 AL500527.2-201ENST00000454105 95 ntBASIC-0.57□□□□□ -2.5
MRE11P49959 SNORA27.2-201ENST00000363365 126 ntBASIC-0.58□□□□□ -2.5
MRE11P49959 MIR147A-201ENST00000385079 72 ntBASIC-0.58□□□□□ -2.5
MRE11P49959 RNU6-226P-201ENST00000363778 107 ntBASIC-0.59□□□□□ -2.5
MRE11P49959 RNU6-141P-201ENST00000410499 105 ntBASIC-0.59□□□□□ -2.5
MRE11P49959 MIR3165-201ENST00000579874 75 ntBASIC-0.59□□□□□ -2.5
MRE11P49959 MIR1246-201ENST00000636535 73 ntBASIC-0.6□□□□□ -2.51
MRE11P49959 SNORD45.2-201ENST00000363552 72 ntBASIC-0.61□□□□□ -2.51
MRE11P49959 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.61□□□□□ -2.51
MRE11P49959 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.61□□□□□ -2.51
MRE11P49959 RPL35AP4-201ENST00000412007 102 ntBASIC-0.61□□□□□ -2.51
MRE11P49959 MIR4499-201ENST00000584834 69 ntBASIC-0.61□□□□□ -2.51
MRE11P49959 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.62□□□□□ -2.51
MRE11P49959 SNORD64-201ENST00000386683 67 ntBASIC-0.62□□□□□ -2.51
MRE11P49959 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.63□□□□□ -2.51
MRE11P49959 SNORD114-25-201ENST00000363742 72 ntBASIC-0.65□□□□□ -2.51
MRE11P49959 uc_338.19-201ENST00000616808 99 ntBASIC-0.65□□□□□ -2.51
MRE11P49959 RNA5SP26-201ENST00000362406 119 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms