Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC090616.4-201ENST00000448026 115 ntBASIC-1.35□□□□□ -2.63
NEDD4P46934 RNA5SP86-201ENST00000390869 98 ntBASIC-1.36□□□□□ -2.63
NEDD4P46934 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.36□□□□□ -2.63
NEDD4P46934 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.37□□□□□ -2.63
NEDD4P46934 RNY4P29-201ENST00000410801 97 ntBASIC-1.37□□□□□ -2.63
NEDD4P46934 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.38□□□□□ -2.63
NEDD4P46934 RNU6-630P-201ENST00000391258 106 ntBASIC-1.38□□□□□ -2.63
NEDD4P46934 RNU6-634P-201ENST00000459134 106 ntBASIC-1.38□□□□□ -2.63
NEDD4P46934 U2.18-201ENST00000622185 84 ntBASIC-1.38□□□□□ -2.63
NEDD4P46934 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.4□□□□□ -2.63
NEDD4P46934 RNU6-540P-201ENST00000384622 101 ntBASIC-1.4□□□□□ -2.63
NEDD4P46934 RNU6-92P-201ENST00000605893 104 ntBASIC-1.4□□□□□ -2.63
NEDD4P46934 RNU6-573P-201ENST00000383938 106 ntBASIC-1.4□□□□□ -2.63
NEDD4P46934 MIR487B-201ENST00000385021 84 ntBASIC-1.4□□□□□ -2.63
NEDD4P46934 MIR23C-201ENST00000579846 100 ntBASIC-1.4□□□□□ -2.63
NEDD4P46934 RNU6-279P-201ENST00000391297 101 ntBASIC-1.41□□□□□ -2.64
NEDD4P46934 MIR548H1-201ENST00000408610 102 ntBASIC-1.41□□□□□ -2.64
NEDD4P46934 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.41□□□□□ -2.64
NEDD4P46934 SNORD1B-201ENST00000363091 84 ntBASIC-1.42□□□□□ -2.64
NEDD4P46934 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.42□□□□□ -2.64
NEDD4P46934 RNU6-663P-201ENST00000391105 106 ntBASIC-1.42□□□□□ -2.64
NEDD4P46934 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.42□□□□□ -2.64
NEDD4P46934 MIR1302-4-201ENST00000408701 150 ntBASIC-1.42□□□□□ -2.64
NEDD4P46934 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.43□□□□□ -2.64
NEDD4P46934 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.43□□□□□ -2.64
NEDD4P46934 RNU6-995P-201ENST00000391244 107 ntBASIC-1.43□□□□□ -2.64
NEDD4P46934 MIR1255A-201ENST00000408338 113 ntBASIC-1.43□□□□□ -2.64
NEDD4P46934 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.43□□□□□ -2.64
NEDD4P46934 RNU6-857P-201ENST00000515893 110 ntBASIC-1.43□□□□□ -2.64
NEDD4P46934 RNU6-983P-201ENST00000516004 103 ntBASIC-1.43□□□□□ -2.64
NEDD4P46934 RNU6-871P-201ENST00000516122 100 ntBASIC-1.43□□□□□ -2.64
NEDD4P46934 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.43□□□□□ -2.64
NEDD4P46934 RNU6-228P-201ENST00000362700 106 ntBASIC-1.44□□□□□ -2.64
NEDD4P46934 RNU6-119P-201ENST00000364882 107 ntBASIC-1.44□□□□□ -2.64
NEDD4P46934 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.44□□□□□ -2.64
NEDD4P46934 MIR3170-201ENST00000582699 77 ntBASIC-1.44□□□□□ -2.64
NEDD4P46934 RNU6-608P-201ENST00000383927 104 ntBASIC-1.45□□□□□ -2.64
NEDD4P46934 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.46□□□□□ -2.64
NEDD4P46934 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
NEDD4P46934 RNU6-79P-201ENST00000362511 107 ntBASIC-1.47□□□□□ -2.65
NEDD4P46934 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.47□□□□□ -2.65
NEDD4P46934 MIR520D-201ENST00000385002 87 ntBASIC-1.47□□□□□ -2.65
NEDD4P46934 SNORD78.1-201ENST00000390866 65 ntBASIC-1.47□□□□□ -2.65
NEDD4P46934 SNORD18.1-201ENST00000363807 70 ntBASIC-1.48□□□□□ -2.65
NEDD4P46934 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.48□□□□□ -2.65
NEDD4P46934 AC018880.2-201ENST00000414265 201 ntBASIC-1.48□□□□□ -2.65
NEDD4P46934 SNORA25.4-201ENST00000363666 124 ntBASIC-1.49□□□□□ -2.65
NEDD4P46934 RNU6-172P-201ENST00000411000 93 ntBASIC-1.49□□□□□ -2.65
NEDD4P46934 RNU6-523P-201ENST00000516304 54 ntBASIC-1.49□□□□□ -2.65
NEDD4P46934 RNU6-247P-201ENST00000362636 107 ntBASIC-1.5□□□□□ -2.65
NEDD4P46934 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.5□□□□□ -2.65
NEDD4P46934 RNU6-400P-201ENST00000391173 106 ntBASIC-1.5□□□□□ -2.65
NEDD4P46934 SNORD30.1-201ENST00000391309 70 ntBASIC-1.5□□□□□ -2.65
NEDD4P46934 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.5□□□□□ -2.65
NEDD4P46934 RNU7-151P-201ENST00000516930 53 ntBASIC-1.5□□□□□ -2.65
NEDD4P46934 SNORD60.1-201ENST00000362451 73 ntBASIC-1.51□□□□□ -2.65
NEDD4P46934 MIR496-201ENST00000385226 102 ntBASIC-1.51□□□□□ -2.65
NEDD4P46934 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.51□□□□□ -2.65
NEDD4P46934 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.52□□□□□ -2.65
NEDD4P46934 AC108019.1-201ENST00000512540 175 ntBASIC-1.53□□□□□ -2.65
NEDD4P46934 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.54□□□□□ -2.66
NEDD4P46934 RNU6-649P-201ENST00000384463 107 ntBASIC-1.54□□□□□ -2.66
NEDD4P46934 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.55□□□□□ -2.66
NEDD4P46934 RNU7-160P-201ENST00000516660 62 ntBASIC-1.55□□□□□ -2.66
NEDD4P46934 RNU6-539P-201ENST00000516665 103 ntBASIC-1.55□□□□□ -2.66
NEDD4P46934 MIR7978-201ENST00000636158 59 ntBASIC-1.55□□□□□ -2.66
NEDD4P46934 MIR4756-201ENST00000577874 78 ntBASIC-1.56□□□□□ -2.66
NEDD4P46934 MIR7110-201ENST00000612638 86 ntBASIC-1.56□□□□□ -2.66
NEDD4P46934 SNORA25.5-201ENST00000363782 126 ntBASIC-1.57□□□□□ -2.66
NEDD4P46934 RNY4P7-201ENST00000364600 96 ntBASIC-1.57□□□□□ -2.66
NEDD4P46934 RNU6-563P-201ENST00000364872 108 ntBASIC-1.57□□□□□ -2.66
NEDD4P46934 MIR579-201ENST00000385221 98 ntBASIC-1.57□□□□□ -2.66
NEDD4P46934 MIR4662A-201ENST00000637499 67 ntBASIC-1.57□□□□□ -2.66
NEDD4P46934 SNORA27.2-201ENST00000363365 126 ntBASIC-1.58□□□□□ -2.66
NEDD4P46934 MIR125B1-201ENST00000385236 88 ntBASIC-1.58□□□□□ -2.66
NEDD4P46934 RNU6-695P-201ENST00000391157 104 ntBASIC-1.58□□□□□ -2.66
NEDD4P46934 RNU6-122P-201ENST00000516818 107 ntBASIC-1.58□□□□□ -2.66
NEDD4P46934 U6.111-201ENST00000636093 83 ntBASIC-1.58□□□□□ -2.66
NEDD4P46934 MIR4679-1-201ENST00000637619 75 ntBASIC-1.58□□□□□ -2.66
NEDD4P46934 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.59□□□□□ -2.66
NEDD4P46934 AC103706.3-201ENST00000636297 85 ntBASIC-1.59□□□□□ -2.66
NEDD4P46934 RNU6-669P-201ENST00000365575 107 ntBASIC-1.6□□□□□ -2.67
NEDD4P46934 AC005520.4-201ENST00000604337 90 ntBASIC-1.6□□□□□ -2.67
NEDD4P46934 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.61□□□□□ -2.67
NEDD4P46934 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.61□□□□□ -2.67
NEDD4P46934 SNORD63.2-201ENST00000516303 64 ntBASIC-1.61□□□□□ -2.67
NEDD4P46934 RNU6-231P-201ENST00000517122 103 ntBASIC-1.61□□□□□ -2.67
NEDD4P46934 AC120024.2-201ENST00000576526 175 ntBASIC-1.61□□□□□ -2.67
NEDD4P46934 MIR4511-201ENST00000582784 87 ntBASIC-1.61□□□□□ -2.67
NEDD4P46934 MIR3123-201ENST00000583417 75 ntBASIC-1.61□□□□□ -2.67
NEDD4P46934 RNA5SP225-201ENST00000410874 135 ntBASIC-1.62□□□□□ -2.67
NEDD4P46934 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.62□□□□□ -2.67
NEDD4P46934 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.62□□□□□ -2.67
NEDD4P46934 RNU6-258P-201ENST00000390884 101 ntBASIC-1.63□□□□□ -2.67
NEDD4P46934 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.64□□□□□ -2.67
NEDD4P46934 SNORD54-201ENST00000459159 67 ntBASIC-1.64□□□□□ -2.67
NEDD4P46934 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.64□□□□□ -2.67
NEDD4P46934 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.64□□□□□ -2.67
NEDD4P46934 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.64□□□□□ -2.67
NEDD4P46934 MIR664B-201ENST00000626756 61 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms