Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.03□□□□□ -2.57
PTPN9P43378 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.04□□□□□ -2.58
PTPN9P43378 RNA5SP192-201ENST00000364404 120 ntBASIC-1.05□□□□□ -2.58
PTPN9P43378 RNA5SP331-201ENST00000364986 107 ntBASIC-1.05□□□□□ -2.58
PTPN9P43378 MIR7978-201ENST00000636158 59 ntBASIC-1.05□□□□□ -2.58
PTPN9P43378 RNU6-164P-201ENST00000364604 103 ntBASIC-1.06□□□□□ -2.58
PTPN9P43378 RNU6-974P-201ENST00000384099 108 ntBASIC-1.06□□□□□ -2.58
PTPN9P43378 AC005520.4-201ENST00000604337 90 ntBASIC-1.06□□□□□ -2.58
PTPN9P43378 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.06□□□□□ -2.58
PTPN9P43378 RNU6-995P-201ENST00000391244 107 ntBASIC-1.07□□□□□ -2.58
PTPN9P43378 SNORD63.2-201ENST00000516303 64 ntBASIC-1.07□□□□□ -2.58
PTPN9P43378 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.07□□□□□ -2.58
PTPN9P43378 SNORA25.4-201ENST00000363666 124 ntBASIC-1.08□□□□□ -2.58
PTPN9P43378 RNU6-649P-201ENST00000384463 107 ntBASIC-1.08□□□□□ -2.58
PTPN9P43378 MIR4662A-201ENST00000637499 67 ntBASIC-1.08□□□□□ -2.58
PTPN9P43378 SNORA25.5-201ENST00000363782 126 ntBASIC-1.09□□□□□ -2.58
PTPN9P43378 RNU6-669P-201ENST00000365575 107 ntBASIC-1.09□□□□□ -2.58
PTPN9P43378 SNORD116.2-201ENST00000391251 93 ntBASIC-1.09□□□□□ -2.58
PTPN9P43378 SNX3P1X-201ENST00000414887 175 ntBASIC-1.09□□□□□ -2.58
PTPN9P43378 U6.111-201ENST00000636093 83 ntBASIC-1.09□□□□□ -2.58
PTPN9P43378 RNU6-810P-201ENST00000364001 107 ntBASIC-1.1□□□□□ -2.59
PTPN9P43378 RNU6-776P-201ENST00000364403 104 ntBASIC-1.1□□□□□ -2.59
PTPN9P43378 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.1□□□□□ -2.59
PTPN9P43378 SNORA72.7-201ENST00000516349 94 ntBASIC-1.1□□□□□ -2.59
PTPN9P43378 RNU6-231P-201ENST00000517122 103 ntBASIC-1.1□□□□□ -2.59
PTPN9P43378 RNU6-563P-201ENST00000364872 108 ntBASIC-1.11□□□□□ -2.59
PTPN9P43378 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.11□□□□□ -2.59
PTPN9P43378 AC018880.2-201ENST00000414265 201 ntBASIC-1.11□□□□□ -2.59
PTPN9P43378 RNA5SP461-201ENST00000516451 104 ntBASIC-1.11□□□□□ -2.59
PTPN9P43378 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.12□□□□□ -2.59
PTPN9P43378 MIR3165-201ENST00000579874 75 ntBASIC-1.12□□□□□ -2.59
PTPN9P43378 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.13□□□□□ -2.59
PTPN9P43378 RNU6-539P-201ENST00000516665 103 ntBASIC-1.13□□□□□ -2.59
PTPN9P43378 MIR7110-201ENST00000612638 86 ntBASIC-1.13□□□□□ -2.59
PTPN9P43378 MIR125B1-201ENST00000385236 88 ntBASIC-1.14□□□□□ -2.59
PTPN9P43378 AC120024.2-201ENST00000576526 175 ntBASIC-1.14□□□□□ -2.59
PTPN9P43378 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.15□□□□□ -2.59
PTPN9P43378 RNU6-122P-201ENST00000516818 107 ntBASIC-1.15□□□□□ -2.59
PTPN9P43378 MIR4520-1-201ENST00000582609 70 ntBASIC-1.15□□□□□ -2.59
PTPN9P43378 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.16□□□□□ -2.6
PTPN9P43378 RNU6-800P-201ENST00000384473 103 ntBASIC-1.16□□□□□ -2.6
PTPN9P43378 RNY3P8-201ENST00000411366 126 ntBASIC-1.16□□□□□ -2.6
PTPN9P43378 MIR4511-201ENST00000582784 87 ntBASIC-1.16□□□□□ -2.6
PTPN9P43378 MIR4306-201ENST00000583390 91 ntBASIC-1.16□□□□□ -2.6
PTPN9P43378 MIR601-201ENST00000385256 79 ntBASIC-1.18□□□□□ -2.6
PTPN9P43378 AC013734.1-201ENST00000619329 111 ntBASIC-1.18□□□□□ -2.6
PTPN9P43378 MIR1468-201ENST00000410600 86 ntBASIC-1.19□□□□□ -2.6
PTPN9P43378 SNORA40.16-201ENST00000517238 121 ntBASIC-1.19□□□□□ -2.6
PTPN9P43378 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.19□□□□□ -2.6
PTPN9P43378 RNU6-79P-201ENST00000362511 107 ntBASIC-1.2□□□□□ -2.6
PTPN9P43378 SNORA27.2-201ENST00000363365 126 ntBASIC-1.21□□□□□ -2.6
PTPN9P43378 RNA5SP180-201ENST00000516181 101 ntBASIC-1.21□□□□□ -2.6
PTPN9P43378 MIR466-201ENST00000580653 84 ntBASIC-1.21□□□□□ -2.6
PTPN9P43378 U6.97-201ENST00000636904 101 ntBASIC-1.21□□□□□ -2.6
PTPN9P43378 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.22□□□□□ -2.6
PTPN9P43378 SNORA40B-201ENST00000385573 128 ntBASIC-1.22□□□□□ -2.6
PTPN9P43378 MIR6502-201ENST00000617296 76 ntBASIC-1.22□□□□□ -2.6
PTPN9P43378 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.22□□□□□ -2.6
PTPN9P43378 AC103706.3-201ENST00000636297 85 ntBASIC-1.22□□□□□ -2.6
PTPN9P43378 MIR198-201ENST00000637333 62 ntBASIC-1.22□□□□□ -2.6
PTPN9P43378 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.23□□□□□ -2.61
PTPN9P43378 RNU6-706P-201ENST00000517229 104 ntBASIC-1.24□□□□□ -2.61
PTPN9P43378 RNU6-940P-201ENST00000363433 104 ntBASIC-1.25□□□□□ -2.61
PTPN9P43378 RNU6-828P-201ENST00000364876 107 ntBASIC-1.25□□□□□ -2.61
PTPN9P43378 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.25□□□□□ -2.61
PTPN9P43378 RNU7-160P-201ENST00000516660 62 ntBASIC-1.25□□□□□ -2.61
PTPN9P43378 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.26□□□□□ -2.61
PTPN9P43378 RNU6-520P-201ENST00000384717 104 ntBASIC-1.27□□□□□ -2.61
PTPN9P43378 RNU6-400P-201ENST00000391173 106 ntBASIC-1.27□□□□□ -2.61
PTPN9P43378 AC110620.1-201ENST00000416042 228 ntBASIC-1.27□□□□□ -2.61
PTPN9P43378 AC114801.3-201ENST00000510231 177 ntBASIC-1.27□□□□□ -2.61
PTPN9P43378 MIR23C-201ENST00000579846 100 ntBASIC-1.27□□□□□ -2.61
PTPN9P43378 MIR3938-201ENST00000582157 103 ntBASIC-1.27□□□□□ -2.61
PTPN9P43378 U4.2-201ENST00000618561 85 ntBASIC-1.27□□□□□ -2.61
PTPN9P43378 MIR202-201ENST00000362219 110 ntBASIC-1.28□□□□□ -2.61
PTPN9P43378 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
PTPN9P43378 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.29□□□□□ -2.62
PTPN9P43378 HLA-S-202ENST00000425174 53 ntBASIC-1.29□□□□□ -2.62
PTPN9P43378 RNU7-119P-201ENST00000459279 63 ntBASIC-1.29□□□□□ -2.62
PTPN9P43378 MIR5591-201ENST00000578248 65 ntBASIC-1.29□□□□□ -2.62
PTPN9P43378 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.3□□□□□ -2.62
PTPN9P43378 MIR1285-2-201ENST00000408311 88 ntBASIC-1.3□□□□□ -2.62
PTPN9P43378 MIR487B-201ENST00000385021 84 ntBASIC-1.31□□□□□ -2.62
PTPN9P43378 RNU6-530P-201ENST00000391180 107 ntBASIC-1.31□□□□□ -2.62
PTPN9P43378 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.31□□□□□ -2.62
PTPN9P43378 MIR365A-201ENST00000362260 87 ntBASIC-1.32□□□□□ -2.62
PTPN9P43378 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.32□□□□□ -2.62
PTPN9P43378 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.32□□□□□ -2.62
PTPN9P43378 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.32□□□□□ -2.62
PTPN9P43378 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.32□□□□□ -2.62
PTPN9P43378 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.32□□□□□ -2.62
PTPN9P43378 RNU6-695P-201ENST00000391157 104 ntBASIC-1.33□□□□□ -2.62
PTPN9P43378 MIR4441-201ENST00000582623 100 ntBASIC-1.33□□□□□ -2.62
PTPN9P43378 AC138207.3-201ENST00000585289 166 ntBASIC-1.33□□□□□ -2.62
PTPN9P43378 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.35□□□□□ -2.63
PTPN9P43378 RNU6-226P-201ENST00000363778 107 ntBASIC-1.35□□□□□ -2.63
PTPN9P43378 RNU6-471P-201ENST00000383944 106 ntBASIC-1.35□□□□□ -2.63
PTPN9P43378 MIR581-201ENST00000384895 96 ntBASIC-1.35□□□□□ -2.63
PTPN9P43378 RNA5SP86-201ENST00000390869 98 ntBASIC-1.36□□□□□ -2.63
PTPN9P43378 MIR3123-201ENST00000583417 75 ntBASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms