Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.78□□□□□ -2.85
HTTP42858 RNU6-315P-201ENST00000362666 107 ntBASIC-2.78□□□□□ -2.85
HTTP42858 RNU6-663P-201ENST00000391105 106 ntBASIC-2.78□□□□□ -2.85
HTTP42858 RNU6-497P-201ENST00000365316 104 ntBASIC-2.79□□□□□ -2.86
HTTP42858 RNU6-259P-201ENST00000383999 107 ntBASIC-2.79□□□□□ -2.86
HTTP42858 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.8□□□□□ -2.86
HTTP42858 Y_RNA.197-201ENST00000364004 102 ntBASIC-2.8□□□□□ -2.86
HTTP42858 AC072026.1-201ENST00000605023 201 ntBASIC-2.8□□□□□ -2.86
HTTP42858 RNU6-122P-201ENST00000516818 107 ntBASIC-2.8□□□□□ -2.86
HTTP42858 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.81□□□□□ -2.86
HTTP42858 RNU6-907P-201ENST00000390924 102 ntBASIC-2.81□□□□□ -2.86
HTTP42858 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.82□□□□□ -2.86
HTTP42858 RNU6-627P-201ENST00000364032 102 ntBASIC-2.82□□□□□ -2.86
HTTP42858 AL157777.2-201ENST00000258070 137 ntBASIC-2.82□□□□□ -2.86
HTTP42858 AC090425.1-201ENST00000610007 140 ntBASIC-2.82□□□□□ -2.86
HTTP42858 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.83□□□□□ -2.86
HTTP42858 SNORA81.3-201ENST00000517283 198 ntBASIC-2.83□□□□□ -2.86
HTTP42858 RNY4P14-201ENST00000363656 96 ntBASIC-2.84□□□□□ -2.86
HTTP42858 Y_RNA.720-201ENST00000517166 92 ntBASIC-2.84□□□□□ -2.86
HTTP42858 RNU7-197P-201ENST00000458836 62 ntBASIC-2.84□□□□□ -2.86
HTTP42858 AC090582.1-201ENST00000636321 199 ntBASIC-2.84□□□□□ -2.86
HTTP42858 MIR590-201ENST00000385008 97 ntBASIC-2.85□□□□□ -2.87
HTTP42858 RNU6-956P-201ENST00000458868 103 ntBASIC-2.85□□□□□ -2.87
HTTP42858 RNU4-33P-201ENST00000364316 85 ntBASIC-2.85□□□□□ -2.87
HTTP42858 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.85□□□□□ -2.87
HTTP42858 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.86□□□□□ -2.87
HTTP42858 SNORD116-4-201ENST00000384733 96 ntBASIC-2.86□□□□□ -2.87
HTTP42858 MTATP6P25-201ENST00000574491 261 ntBASIC-2.86□□□□□ -2.87
HTTP42858 RNU6-808P-201ENST00000391233 108 ntBASIC-2.87□□□□□ -2.87
HTTP42858 RNU7-107P-201ENST00000459121 61 ntBASIC-2.87□□□□□ -2.87
HTTP42858 RNU6-109P-201ENST00000516364 107 ntBASIC-2.87□□□□□ -2.87
HTTP42858 RNU6-184P-201ENST00000516514 107 ntBASIC-2.87□□□□□ -2.87
HTTP42858 MIR3938-201ENST00000582157 103 ntBASIC-2.87□□□□□ -2.87
HTTP42858 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-2.87□□□□□ -2.87
HTTP42858 AC113195.1-201ENST00000579952 141 ntBASIC-2.88□□□□□ -2.87
HTTP42858 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.88□□□□□ -2.87
HTTP42858 Y_RNA.662-201ENST00000516028 97 ntBASIC-2.88□□□□□ -2.87
HTTP42858 SNORD33.1-201ENST00000516213 88 ntBASIC-2.89□□□□□ -2.87
HTTP42858 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.9□□□□□ -2.87
HTTP42858 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.9□□□□□ -2.87
HTTP42858 RNU6-506P-201ENST00000516553 94 ntBASIC-2.9□□□□□ -2.87
HTTP42858 RNU6-219P-201ENST00000364728 107 ntBASIC-2.9□□□□□ -2.87
HTTP42858 RNU6-718P-201ENST00000516166 105 ntBASIC-2.9□□□□□ -2.87
HTTP42858 RNU6-986P-201ENST00000363133 102 ntBASIC-2.9□□□□□ -2.87
HTTP42858 RNU6-713P-201ENST00000384761 107 ntBASIC-2.9□□□□□ -2.87
HTTP42858 RNU6-687P-201ENST00000516443 89 ntBASIC-2.91□□□□□ -2.88
HTTP42858 SNORD113-1-201ENST00000365321 69 ntBASIC-2.91□□□□□ -2.88
HTTP42858 MIR1302-5-201ENST00000408164 150 ntBASIC-2.92□□□□□ -2.88
HTTP42858 Y_RNA.626-201ENST00000411288 95 ntBASIC-2.92□□□□□ -2.88
HTTP42858 AC110620.1-201ENST00000416042 228 ntBASIC-2.92□□□□□ -2.88
HTTP42858 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.92□□□□□ -2.88
HTTP42858 Y_RNA.272-201ENST00000364696 102 ntBASIC-2.92□□□□□ -2.88
HTTP42858 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.92□□□□□ -2.88
HTTP42858 RNU6-255P-201ENST00000516957 105 ntBASIC-2.92□□□□□ -2.88
HTTP42858 SNORA33.2-201ENST00000365413 134 ntBASIC-2.93□□□□□ -2.88
HTTP42858 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.93□□□□□ -2.88
HTTP42858 RNU6-635P-201ENST00000516651 102 ntBASIC-2.93□□□□□ -2.88
HTTP42858 RNU6-209P-201ENST00000384118 107 ntBASIC-2.93□□□□□ -2.88
HTTP42858 Y_RNA.580-201ENST00000391004 95 ntBASIC-2.93□□□□□ -2.88
HTTP42858 RNU6-959P-201ENST00000384671 107 ntBASIC-2.93□□□□□ -2.88
HTTP42858 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.94□□□□□ -2.88
HTTP42858 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.95□□□□□ -2.88
HTTP42858 Y_RNA.200-201ENST00000364018 102 ntBASIC-2.95□□□□□ -2.88
HTTP42858 SNORD116-21-201ENST00000384507 92 ntBASIC-2.95□□□□□ -2.88
HTTP42858 SNORD116-18-201ENST00000383961 92 ntBASIC-2.95□□□□□ -2.88
HTTP42858 AL589823.1-201ENST00000429577 183 ntBASIC-2.96□□□□□ -2.88
HTTP42858 SNORA40.13-201ENST00000516379 120 ntBASIC-2.96□□□□□ -2.88
HTTP42858 MIR3688-2-201ENST00000636963 87 ntBASIC-2.96□□□□□ -2.88
HTTP42858 RNU6-675P-201ENST00000384236 104 ntBASIC-2.96□□□□□ -2.88
HTTP42858 MIR3134-201ENST00000579433 74 ntBASIC-2.97□□□□□ -2.88
HTTP42858 Y_RNA.20-201ENST00000362479 113 ntBASIC-2.97□□□□□ -2.88
HTTP42858 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.97□□□□□ -2.89
HTTP42858 AC022559.1-201ENST00000520905 205 ntBASIC-2.97□□□□□ -2.89
HTTP42858 RNU6-426P-201ENST00000516464 97 ntBASIC-2.98□□□□□ -2.89
HTTP42858 AC141273.2-201ENST00000618989 130 ntBASIC-2.98□□□□□ -2.89
HTTP42858 RNU6-394P-201ENST00000410735 107 ntBASIC-2.98□□□□□ -2.89
HTTP42858 U4.5-201ENST00000617137 123 ntBASIC-2.98□□□□□ -2.89
HTTP42858 MIR4511-201ENST00000582784 87 ntBASIC-2.99□□□□□ -2.89
HTTP42858 U7.4-201ENST00000614961 63 ntBASIC-2.99□□□□□ -2.89
HTTP42858 AC103706.3-201ENST00000636297 85 ntBASIC-2.99□□□□□ -2.89
HTTP42858 U6.95-201ENST00000636931 70 ntBASIC-2.99□□□□□ -2.89
HTTP42858 Y_RNA.15-201ENST00000362420 102 ntBASIC-2.99□□□□□ -2.89
HTTP42858 RNU6-787P-201ENST00000384032 107 ntBASIC-2.99□□□□□ -2.89
HTTP42858 RNU6-584P-201ENST00000410350 95 ntBASIC-2.99□□□□□ -2.89
HTTP42858 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.99□□□□□ -2.89
HTTP42858 MIR3914-2-201ENST00000637339 95 ntBASIC-2.99□□□□□ -2.89
HTTP42858 Y_RNA.273-201ENST00000364703 102 ntBASIC-3□□□□□ -2.89
HTTP42858 MTND4LP9-201ENST00000427694 174 ntBASIC-3□□□□□ -2.89
HTTP42858 MIR548X2-201ENST00000579776 100 ntBASIC-3.01□□□□□ -2.89
HTTP42858 AC004792.1-201ENST00000614523 137 ntBASIC-3.02□□□□□ -2.89
HTTP42858 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.02□□□□□ -2.89
HTTP42858 MIR1277-201ENST00000408536 78 ntBASIC-3.02□□□□□ -2.89
HTTP42858 Y_RNA.619-201ENST00000410951 90 ntBASIC-3.02□□□□□ -2.89
HTTP42858 SNORD19B-201ENST00000459623 84 ntBASIC-3.02□□□□□ -2.89
HTTP42858 RNU6-844P-201ENST00000517175 102 ntBASIC-3.02□□□□□ -2.89
HTTP42858 RNU6-1020P-201ENST00000363684 107 ntBASIC-3.03□□□□□ -2.89
HTTP42858 SNORA40-201ENST00000388090 126 ntBASIC-3.03□□□□□ -2.89
HTTP42858 RNU6-59P-201ENST00000384787 107 ntBASIC-3.04□□□□□ -2.9
HTTP42858 MIR548BB-201ENST00000626714 66 ntBASIC-3.04□□□□□ -2.9
HTTP42858 MT-TL1-201ENST00000386347 75 ntBASIC-3.04□□□□□ -2.9
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms