Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNU6-242P-201ENST00000384359 107 ntBASIC-1.38□□□□□ -2.63
TNFSF9P41273 MIR4756-201ENST00000577874 78 ntBASIC-1.38□□□□□ -2.63
TNFSF9P41273 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.39□□□□□ -2.63
TNFSF9P41273 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.39□□□□□ -2.63
TNFSF9P41273 SNORD60.1-201ENST00000362451 73 ntBASIC-1.4□□□□□ -2.63
TNFSF9P41273 SNORD18.1-201ENST00000363807 70 ntBASIC-1.4□□□□□ -2.63
TNFSF9P41273 MIR125B1-201ENST00000385236 88 ntBASIC-1.4□□□□□ -2.63
TNFSF9P41273 RNY3P8-201ENST00000411366 126 ntBASIC-1.4□□□□□ -2.63
TNFSF9P41273 RNA5SP180-201ENST00000516181 101 ntBASIC-1.4□□□□□ -2.63
TNFSF9P41273 RNU6-523P-201ENST00000516304 54 ntBASIC-1.4□□□□□ -2.63
TNFSF9P41273 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.4□□□□□ -2.63
TNFSF9P41273 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.41□□□□□ -2.64
TNFSF9P41273 AC108019.1-201ENST00000512540 175 ntBASIC-1.41□□□□□ -2.64
TNFSF9P41273 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.41□□□□□ -2.64
TNFSF9P41273 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.42□□□□□ -2.64
TNFSF9P41273 RNA5SP173-201ENST00000364857 136 ntBASIC-1.42□□□□□ -2.64
TNFSF9P41273 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.42□□□□□ -2.64
TNFSF9P41273 RNU6-92P-201ENST00000605893 104 ntBASIC-1.42□□□□□ -2.64
TNFSF9P41273 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.43□□□□□ -2.64
TNFSF9P41273 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.43□□□□□ -2.64
TNFSF9P41273 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.43□□□□□ -2.64
TNFSF9P41273 RNU6-573P-201ENST00000383938 106 ntBASIC-1.43□□□□□ -2.64
TNFSF9P41273 RNU6-400P-201ENST00000391173 106 ntBASIC-1.43□□□□□ -2.64
TNFSF9P41273 RNU6-542P-201ENST00000516405 103 ntBASIC-1.43□□□□□ -2.64
TNFSF9P41273 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.43□□□□□ -2.64
TNFSF9P41273 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.44□□□□□ -2.64
TNFSF9P41273 RNU6-995P-201ENST00000391244 107 ntBASIC-1.44□□□□□ -2.64
TNFSF9P41273 U6.97-201ENST00000636904 101 ntBASIC-1.44□□□□□ -2.64
TNFSF9P41273 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.45□□□□□ -2.64
TNFSF9P41273 RNU6-810P-201ENST00000364001 107 ntBASIC-1.45□□□□□ -2.64
TNFSF9P41273 RNU6-411P-201ENST00000384451 107 ntBASIC-1.45□□□□□ -2.64
TNFSF9P41273 MIR601-201ENST00000385256 79 ntBASIC-1.45□□□□□ -2.64
TNFSF9P41273 RNU6-983P-201ENST00000516004 103 ntBASIC-1.45□□□□□ -2.64
TNFSF9P41273 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.46□□□□□ -2.64
TNFSF9P41273 RNU6-634P-201ENST00000459134 106 ntBASIC-1.46□□□□□ -2.64
TNFSF9P41273 SNORD73B-201ENST00000364394 72 ntBASIC-1.47□□□□□ -2.64
TNFSF9P41273 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.47□□□□□ -2.64
TNFSF9P41273 RNU6-820P-201ENST00000384273 107 ntBASIC-1.47□□□□□ -2.64
TNFSF9P41273 RNU6-695P-201ENST00000391157 104 ntBASIC-1.47□□□□□ -2.64
TNFSF9P41273 U7.4-201ENST00000614961 63 ntBASIC-1.47□□□□□ -2.64
TNFSF9P41273 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.48□□□□□ -2.65
TNFSF9P41273 SNORA27.2-201ENST00000363365 126 ntBASIC-1.48□□□□□ -2.65
TNFSF9P41273 RNU6-663P-201ENST00000391105 106 ntBASIC-1.48□□□□□ -2.65
TNFSF9P41273 RNU6-231P-201ENST00000517122 103 ntBASIC-1.48□□□□□ -2.65
TNFSF9P41273 MIR3123-201ENST00000583417 75 ntBASIC-1.48□□□□□ -2.65
TNFSF9P41273 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.49□□□□□ -2.65
TNFSF9P41273 SNORD116.2-201ENST00000391251 93 ntBASIC-1.49□□□□□ -2.65
TNFSF9P41273 MIR1255A-201ENST00000408338 113 ntBASIC-1.49□□□□□ -2.65
TNFSF9P41273 MIR581-201ENST00000384895 96 ntBASIC-1.5□□□□□ -2.65
TNFSF9P41273 MIR23C-201ENST00000579846 100 ntBASIC-1.5□□□□□ -2.65
TNFSF9P41273 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.51□□□□□ -2.65
TNFSF9P41273 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.51□□□□□ -2.65
TNFSF9P41273 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.51□□□□□ -2.65
TNFSF9P41273 MIR7110-201ENST00000612638 86 ntBASIC-1.51□□□□□ -2.65
TNFSF9P41273 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.52□□□□□ -2.65
TNFSF9P41273 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.52□□□□□ -2.65
TNFSF9P41273 MIR1285-2-201ENST00000408311 88 ntBASIC-1.52□□□□□ -2.65
TNFSF9P41273 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.53□□□□□ -2.65
TNFSF9P41273 SNORA40.16-201ENST00000517238 121 ntBASIC-1.53□□□□□ -2.65
TNFSF9P41273 MIR4723-201ENST00000585070 81 ntBASIC-1.53□□□□□ -2.65
TNFSF9P41273 MIR664B-201ENST00000626756 61 ntBASIC-1.53□□□□□ -2.65
TNFSF9P41273 SNORA25.5-201ENST00000363782 126 ntBASIC-1.54□□□□□ -2.66
TNFSF9P41273 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.54□□□□□ -2.66
TNFSF9P41273 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.54□□□□□ -2.66
TNFSF9P41273 RNY4P29-201ENST00000410801 97 ntBASIC-1.54□□□□□ -2.66
TNFSF9P41273 RNU6-857P-201ENST00000515893 110 ntBASIC-1.54□□□□□ -2.66
TNFSF9P41273 SNORD30.1-201ENST00000391309 70 ntBASIC-1.55□□□□□ -2.66
TNFSF9P41273 RNA5SP225-201ENST00000410874 135 ntBASIC-1.55□□□□□ -2.66
TNFSF9P41273 RNU4-88P-201ENST00000411220 86 ntBASIC-1.55□□□□□ -2.66
TNFSF9P41273 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.55□□□□□ -2.66
TNFSF9P41273 RNA5SP170-201ENST00000517150 101 ntBASIC-1.55□□□□□ -2.66
TNFSF9P41273 MIR548AM-201ENST00000584298 74 ntBASIC-1.55□□□□□ -2.66
TNFSF9P41273 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.55□□□□□ -2.66
TNFSF9P41273 RNU6-520P-201ENST00000384717 104 ntBASIC-1.56□□□□□ -2.66
TNFSF9P41273 RNU6-980P-201ENST00000516925 103 ntBASIC-1.56□□□□□ -2.66
TNFSF9P41273 MIR202-201ENST00000362219 110 ntBASIC-1.57□□□□□ -2.66
TNFSF9P41273 RNU6-122P-201ENST00000516818 107 ntBASIC-1.57□□□□□ -2.66
TNFSF9P41273 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.57□□□□□ -2.66
TNFSF9P41273 RNU7-160P-201ENST00000516660 62 ntBASIC-1.58□□□□□ -2.66
TNFSF9P41273 MIR548W-201ENST00000581970 74 ntBASIC-1.58□□□□□ -2.66
TNFSF9P41273 SNORA25.4-201ENST00000363666 124 ntBASIC-1.59□□□□□ -2.66
TNFSF9P41273 RNU6-841P-201ENST00000383872 107 ntBASIC-1.59□□□□□ -2.66
TNFSF9P41273 SNORA40B-201ENST00000385573 128 ntBASIC-1.59□□□□□ -2.66
TNFSF9P41273 RNU6-828P-201ENST00000364876 107 ntBASIC-1.6□□□□□ -2.67
TNFSF9P41273 RNU6-649P-201ENST00000384463 107 ntBASIC-1.6□□□□□ -2.67
TNFSF9P41273 snoU13.10-201ENST00000459301 103 ntBASIC-1.6□□□□□ -2.67
TNFSF9P41273 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.6□□□□□ -2.67
TNFSF9P41273 MIR3202-2-201ENST00000635980 79 ntBASIC-1.6□□□□□ -2.67
TNFSF9P41273 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.61□□□□□ -2.67
TNFSF9P41273 SNORA26.2-201ENST00000390922 122 ntBASIC-1.61□□□□□ -2.67
TNFSF9P41273 RNU6-279P-201ENST00000391297 101 ntBASIC-1.61□□□□□ -2.67
TNFSF9P41273 U6.111-201ENST00000636093 83 ntBASIC-1.61□□□□□ -2.67
TNFSF9P41273 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.62□□□□□ -2.67
TNFSF9P41273 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.63□□□□□ -2.67
TNFSF9P41273 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.63□□□□□ -2.67
TNFSF9P41273 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.63□□□□□ -2.67
TNFSF9P41273 RNU6-118P-201ENST00000516552 102 ntBASIC-1.63□□□□□ -2.67
TNFSF9P41273 MIR4511-201ENST00000582784 87 ntBASIC-1.63□□□□□ -2.67
TNFSF9P41273 RNA5SP405-201ENST00000363059 114 ntBASIC-1.64□□□□□ -2.67
TNFSF9P41273 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms