Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 MIR4662A-201ENST00000637499 67 ntBASIC-0.81□□□□□ -2.54
SOX3P41225 RNU6-871P-201ENST00000516122 100 ntBASIC-0.82□□□□□ -2.54
SOX3P41225 SNORA72.7-201ENST00000516349 94 ntBASIC-0.82□□□□□ -2.54
SOX3P41225 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.82□□□□□ -2.54
SOX3P41225 uc_338.19-201ENST00000616808 99 ntBASIC-0.82□□□□□ -2.54
SOX3P41225 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.83□□□□□ -2.54
SOX3P41225 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.83□□□□□ -2.54
SOX3P41225 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.83□□□□□ -2.54
SOX3P41225 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.83□□□□□ -2.54
SOX3P41225 MIR6818-201ENST00000621576 65 ntBASIC-0.83□□□□□ -2.54
SOX3P41225 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.84□□□□□ -2.54
SOX3P41225 RNU6-608P-201ENST00000383927 104 ntBASIC-0.84□□□□□ -2.54
SOX3P41225 MIR579-201ENST00000385221 98 ntBASIC-0.84□□□□□ -2.54
SOX3P41225 RNU6-172P-201ENST00000411000 93 ntBASIC-0.84□□□□□ -2.54
SOX3P41225 RNU6-539P-201ENST00000516665 103 ntBASIC-0.84□□□□□ -2.54
SOX3P41225 RNU7-151P-201ENST00000516930 53 ntBASIC-0.84□□□□□ -2.54
SOX3P41225 SNORA25.5-201ENST00000363782 126 ntBASIC-0.85□□□□□ -2.55
SOX3P41225 RNU6-258P-201ENST00000390884 101 ntBASIC-0.85□□□□□ -2.55
SOX3P41225 snoU83B.1-201ENST00000517136 88 ntBASIC-0.85□□□□□ -2.55
SOX3P41225 MIR3170-201ENST00000582699 77 ntBASIC-0.85□□□□□ -2.55
SOX3P41225 MIR4511-201ENST00000582784 87 ntBASIC-0.85□□□□□ -2.55
SOX3P41225 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.85□□□□□ -2.55
SOX3P41225 MIR7978-201ENST00000636158 59 ntBASIC-0.85□□□□□ -2.55
SOX3P41225 RNU6-800P-201ENST00000384473 103 ntBASIC-0.86□□□□□ -2.55
SOX3P41225 MIR548AA1-201ENST00000384971 97 ntBASIC-0.86□□□□□ -2.55
SOX3P41225 MIR29B1-201ENST00000385015 81 ntBASIC-0.86□□□□□ -2.55
SOX3P41225 AC090616.4-201ENST00000448026 115 ntBASIC-0.86□□□□□ -2.55
SOX3P41225 MIR4490-201ENST00000582647 84 ntBASIC-0.87□□□□□ -2.55
SOX3P41225 RNU6-122P-201ENST00000516818 107 ntBASIC-0.88□□□□□ -2.55
SOX3P41225 MIR365A-201ENST00000362260 87 ntBASIC-0.89□□□□□ -2.55
SOX3P41225 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.89□□□□□ -2.55
SOX3P41225 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.89□□□□□ -2.55
SOX3P41225 MIR1285-2-201ENST00000408311 88 ntBASIC-0.89□□□□□ -2.55
SOX3P41225 RNU6-706P-201ENST00000517229 104 ntBASIC-0.89□□□□□ -2.55
SOX3P41225 MIR4441-201ENST00000582623 100 ntBASIC-0.89□□□□□ -2.55
SOX3P41225 RNU6-226P-201ENST00000363778 107 ntBASIC-0.9□□□□□ -2.55
SOX3P41225 MIR125B1-201ENST00000385236 88 ntBASIC-0.9□□□□□ -2.55
SOX3P41225 RNU6-231P-201ENST00000517122 103 ntBASIC-0.9□□□□□ -2.55
SOX3P41225 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.9□□□□□ -2.55
SOX3P41225 MIR1246-201ENST00000636535 73 ntBASIC-0.9□□□□□ -2.55
SOX3P41225 RNU6-974P-201ENST00000384099 108 ntBASIC-0.91□□□□□ -2.56
SOX3P41225 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.91□□□□□ -2.56
SOX3P41225 AC138207.3-201ENST00000585289 166 ntBASIC-0.91□□□□□ -2.56
SOX3P41225 AC103706.3-201ENST00000636297 85 ntBASIC-0.91□□□□□ -2.56
SOX3P41225 RNY4P27-201ENST00000363341 96 ntBASIC-0.92□□□□□ -2.56
SOX3P41225 AC114801.3-201ENST00000510231 177 ntBASIC-0.92□□□□□ -2.56
SOX3P41225 RNU6-638P-201ENST00000516582 104 ntBASIC-0.92□□□□□ -2.56
SOX3P41225 RNU6-810P-201ENST00000364001 107 ntBASIC-0.94□□□□□ -2.56
SOX3P41225 RNU6-669P-201ENST00000365575 107 ntBASIC-0.94□□□□□ -2.56
SOX3P41225 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.94□□□□□ -2.56
SOX3P41225 AC110620.1-201ENST00000416042 228 ntBASIC-0.94□□□□□ -2.56
SOX3P41225 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.95□□□□□ -2.56
SOX3P41225 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.95□□□□□ -2.56
SOX3P41225 MIR7110-201ENST00000612638 86 ntBASIC-0.95□□□□□ -2.56
SOX3P41225 SNORD114-3-201ENST00000364969 75 ntBASIC-0.96□□□□□ -2.56
SOX3P41225 SNORD116.2-201ENST00000391251 93 ntBASIC-0.96□□□□□ -2.56
SOX3P41225 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.96□□□□□ -2.56
SOX3P41225 SNORA40.16-201ENST00000517238 121 ntBASIC-0.96□□□□□ -2.56
SOX3P41225 RNU6-164P-201ENST00000364604 103 ntBASIC-0.97□□□□□ -2.56
SOX3P41225 RNU6-995P-201ENST00000391244 107 ntBASIC-0.97□□□□□ -2.56
SOX3P41225 MIR8485-201ENST00000401372 91 ntBASIC-0.97□□□□□ -2.56
SOX3P41225 HLA-S-202ENST00000425174 53 ntBASIC-0.97□□□□□ -2.56
SOX3P41225 SNORD63.2-201ENST00000516303 64 ntBASIC-0.97□□□□□ -2.56
SOX3P41225 AC091912.2-201ENST00000624798 167 ntBASIC-0.97□□□□□ -2.56
SOX3P41225 RNU6-247P-201ENST00000362636 107 ntBASIC-0.98□□□□□ -2.57
SOX3P41225 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.98□□□□□ -2.57
SOX3P41225 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.98□□□□□ -2.57
SOX3P41225 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.98□□□□□ -2.57
SOX3P41225 MIR466-201ENST00000580653 84 ntBASIC-0.98□□□□□ -2.57
SOX3P41225 MIR4723-201ENST00000585070 81 ntBASIC-0.98□□□□□ -2.57
SOX3P41225 MIR6874-201ENST00000635894 71 ntBASIC-0.98□□□□□ -2.57
SOX3P41225 RNU6-940P-201ENST00000363433 104 ntBASIC-0.99□□□□□ -2.57
SOX3P41225 RNU6-471P-201ENST00000383944 106 ntBASIC-0.99□□□□□ -2.57
SOX3P41225 MIR3938-201ENST00000582157 103 ntBASIC-0.99□□□□□ -2.57
SOX3P41225 MIR1207-201ENST00000408249 87 ntBASIC-1□□□□□ -2.57
SOX3P41225 SNORA40B-201ENST00000385573 128 ntBASIC-1.01□□□□□ -2.57
SOX3P41225 RNU6-576P-201ENST00000390854 102 ntBASIC-1.01□□□□□ -2.57
SOX3P41225 MIR5591-201ENST00000578248 65 ntBASIC-1.01□□□□□ -2.57
SOX3P41225 RNU6-563P-201ENST00000364872 108 ntBASIC-1.02□□□□□ -2.57
SOX3P41225 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.02□□□□□ -2.57
SOX3P41225 RNU7-160P-201ENST00000516660 62 ntBASIC-1.02□□□□□ -2.57
SOX3P41225 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.02□□□□□ -2.57
SOX3P41225 MIR4770-201ENST00000579149 58 ntBASIC-1.03□□□□□ -2.57
SOX3P41225 RNU6-79P-201ENST00000362511 107 ntBASIC-1.05□□□□□ -2.58
SOX3P41225 SNORA27.2-201ENST00000363365 126 ntBASIC-1.05□□□□□ -2.58
SOX3P41225 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
SOX3P41225 RNU6-983P-201ENST00000516004 103 ntBASIC-1.05□□□□□ -2.58
SOX3P41225 RNU6-446P-201ENST00000362827 106 ntBASIC-1.06□□□□□ -2.58
SOX3P41225 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.06□□□□□ -2.58
SOX3P41225 RNY3P8-201ENST00000411366 126 ntBASIC-1.06□□□□□ -2.58
SOX3P41225 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.06□□□□□ -2.58
SOX3P41225 AC120024.2-201ENST00000576526 175 ntBASIC-1.06□□□□□ -2.58
SOX3P41225 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.07□□□□□ -2.58
SOX3P41225 AC018880.2-201ENST00000414265 201 ntBASIC-1.07□□□□□ -2.58
SOX3P41225 RNU6-828P-201ENST00000364876 107 ntBASIC-1.08□□□□□ -2.58
SOX3P41225 RNU7-119P-201ENST00000459279 63 ntBASIC-1.08□□□□□ -2.58
SOX3P41225 AC013734.1-201ENST00000619329 111 ntBASIC-1.08□□□□□ -2.58
SOX3P41225 MIR496-201ENST00000385226 102 ntBASIC-1.09□□□□□ -2.58
SOX3P41225 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.09□□□□□ -2.58
SOX3P41225 MIR6502-201ENST00000617296 76 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 230 ms