Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.1□□□□□ -2.75
COL18A1P39060 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.1□□□□□ -2.75
COL18A1P39060 MALAT1.1-201ENST00000618249 95 ntBASIC-2.1□□□□□ -2.75
COL18A1P39060 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.1□□□□□ -2.75
COL18A1P39060 SNORA41B-201ENST00000384785 128 ntBASIC-2.11□□□□□ -2.75
COL18A1P39060 MIR4484-201ENST00000582855 83 ntBASIC-2.11□□□□□ -2.75
COL18A1P39060 FTX_4.1-201ENST00000616291 147 ntBASIC-2.11□□□□□ -2.75
COL18A1P39060 SNORA63.4-201ENST00000362763 126 ntBASIC-2.12□□□□□ -2.75
COL18A1P39060 AC099654.10-201ENST00000640395 161 ntBASIC-2.12□□□□□ -2.75
COL18A1P39060 RNU6-81P-201ENST00000365608 104 ntBASIC-2.13□□□□□ -2.75
COL18A1P39060 AC090425.1-201ENST00000610007 140 ntBASIC-2.13□□□□□ -2.75
COL18A1P39060 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.13□□□□□ -2.75
COL18A1P39060 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.13□□□□□ -2.75
COL18A1P39060 MIR548W-201ENST00000581970 74 ntBASIC-2.13□□□□□ -2.75
COL18A1P39060 AL365222.1-201ENST00000614661 98 ntBASIC-2.13□□□□□ -2.75
COL18A1P39060 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.13□□□□□ -2.75
COL18A1P39060 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.13□□□□□ -2.75
COL18A1P39060 SNORD1B-201ENST00000363091 84 ntBASIC-2.15□□□□□ -2.75
COL18A1P39060 RNU6-669P-201ENST00000365575 107 ntBASIC-2.15□□□□□ -2.75
COL18A1P39060 snoU13.10-201ENST00000459301 103 ntBASIC-2.15□□□□□ -2.75
COL18A1P39060 MIR450A1-201ENST00000362262 91 ntBASIC-2.16□□□□□ -2.76
COL18A1P39060 SNORD45A-201ENST00000384512 84 ntBASIC-2.16□□□□□ -2.76
COL18A1P39060 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.17□□□□□ -2.76
COL18A1P39060 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.17□□□□□ -2.76
COL18A1P39060 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.17□□□□□ -2.76
COL18A1P39060 RNU6-675P-201ENST00000384236 104 ntBASIC-2.18□□□□□ -2.76
COL18A1P39060 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.18□□□□□ -2.76
COL18A1P39060 SNORD63.2-201ENST00000516303 64 ntBASIC-2.18□□□□□ -2.76
COL18A1P39060 RNU6-315P-201ENST00000362666 107 ntBASIC-2.18□□□□□ -2.76
COL18A1P39060 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.18□□□□□ -2.76
COL18A1P39060 AC013734.1-201ENST00000619329 111 ntBASIC-2.18□□□□□ -2.76
COL18A1P39060 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.19□□□□□ -2.76
COL18A1P39060 MIR7978-201ENST00000636158 59 ntBASIC-2.2□□□□□ -2.76
COL18A1P39060 RNU6-22P-201ENST00000384355 107 ntBASIC-2.21□□□□□ -2.76
COL18A1P39060 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.21□□□□□ -2.76
COL18A1P39060 AC005520.4-201ENST00000604337 90 ntBASIC-2.21□□□□□ -2.76
COL18A1P39060 MIR579-201ENST00000385221 98 ntBASIC-2.21□□□□□ -2.76
COL18A1P39060 RNU6-172P-201ENST00000411000 93 ntBASIC-2.21□□□□□ -2.76
COL18A1P39060 U6.97-201ENST00000636904 101 ntBASIC-2.21□□□□□ -2.76
COL18A1P39060 SNORD115-31-201ENST00000365318 82 ntBASIC-2.22□□□□□ -2.76
COL18A1P39060 MIR154-201ENST00000385243 84 ntBASIC-2.22□□□□□ -2.76
COL18A1P39060 RNU6-542P-201ENST00000516405 103 ntBASIC-2.22□□□□□ -2.76
COL18A1P39060 MIR5693-201ENST00000577722 73 ntBASIC-2.22□□□□□ -2.76
COL18A1P39060 MIR664A-201ENST00000626086 82 ntBASIC-2.22□□□□□ -2.76
COL18A1P39060 SNORD60-201ENST00000383903 83 ntBASIC-2.23□□□□□ -2.77
COL18A1P39060 IGLL4P-201ENST00000614590 133 ntBASIC-2.23□□□□□ -2.77
COL18A1P39060 RNU6-209P-201ENST00000384118 107 ntBASIC-2.23□□□□□ -2.77
COL18A1P39060 RNU6-523P-201ENST00000516304 54 ntBASIC-2.23□□□□□ -2.77
COL18A1P39060 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.23□□□□□ -2.77
COL18A1P39060 SNORD18C-201ENST00000362704 69 ntBASIC-2.24□□□□□ -2.77
COL18A1P39060 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.24□□□□□ -2.77
COL18A1P39060 RNU6-895P-201ENST00000384125 103 ntBASIC-2.24□□□□□ -2.77
COL18A1P39060 RNU6-70P-201ENST00000516438 60 ntBASIC-2.24□□□□□ -2.77
COL18A1P39060 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.26□□□□□ -2.77
COL18A1P39060 AC097484.2-201ENST00000509147 251 ntBASIC-2.26□□□□□ -2.77
COL18A1P39060 RNU7-160P-201ENST00000516660 62 ntBASIC-2.26□□□□□ -2.77
COL18A1P39060 RNU6-844P-201ENST00000517175 102 ntBASIC-2.26□□□□□ -2.77
COL18A1P39060 RNU6-789P-201ENST00000517105 102 ntBASIC-2.26□□□□□ -2.77
COL18A1P39060 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.27□□□□□ -2.77
COL18A1P39060 RNY1P1-201ENST00000364372 112 ntBASIC-2.27□□□□□ -2.77
COL18A1P39060 MIR125B1-201ENST00000385236 88 ntBASIC-2.27□□□□□ -2.77
COL18A1P39060 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.27□□□□□ -2.77
COL18A1P39060 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.27□□□□□ -2.77
COL18A1P39060 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.27□□□□□ -2.77
COL18A1P39060 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.27□□□□□ -2.77
COL18A1P39060 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.27□□□□□ -2.77
COL18A1P39060 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.27□□□□□ -2.77
COL18A1P39060 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.27□□□□□ -2.77
COL18A1P39060 RNU6-92P-201ENST00000605893 104 ntBASIC-2.28□□□□□ -2.77
COL18A1P39060 RNY4P25-201ENST00000459254 96 ntBASIC-2.29□□□□□ -2.78
COL18A1P39060 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.29□□□□□ -2.78
COL18A1P39060 RNU6-32P-201ENST00000383948 107 ntBASIC-2.3□□□□□ -2.78
COL18A1P39060 RNU6-13P-201ENST00000384248 107 ntBASIC-2.3□□□□□ -2.78
COL18A1P39060 RNU6-12P-201ENST00000384604 107 ntBASIC-2.3□□□□□ -2.78
COL18A1P39060 RNU6-520P-201ENST00000384717 104 ntBASIC-2.3□□□□□ -2.78
COL18A1P39060 RNU6-41P-201ENST00000384741 107 ntBASIC-2.3□□□□□ -2.78
COL18A1P39060 RNY3P8-201ENST00000411366 126 ntBASIC-2.3□□□□□ -2.78
COL18A1P39060 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.3□□□□□ -2.78
COL18A1P39060 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.31□□□□□ -2.78
COL18A1P39060 MIR488-201ENST00000365739 83 ntBASIC-2.31□□□□□ -2.78
COL18A1P39060 SNORD116-24-201ENST00000384549 92 ntBASIC-2.31□□□□□ -2.78
COL18A1P39060 RNU6-141P-201ENST00000410499 105 ntBASIC-2.31□□□□□ -2.78
COL18A1P39060 RNU6-313P-201ENST00000516317 112 ntBASIC-2.31□□□□□ -2.78
COL18A1P39060 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.32□□□□□ -2.78
COL18A1P39060 RNU6-974P-201ENST00000384099 108 ntBASIC-2.32□□□□□ -2.78
COL18A1P39060 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.33□□□□□ -2.78
COL18A1P39060 RNU6-828P-201ENST00000364876 107 ntBASIC-2.33□□□□□ -2.78
COL18A1P39060 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.33□□□□□ -2.78
COL18A1P39060 MIR7110-201ENST00000612638 86 ntBASIC-2.33□□□□□ -2.78
COL18A1P39060 RNU6-979P-201ENST00000383896 107 ntBASIC-2.34□□□□□ -2.78
COL18A1P39060 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.35□□□□□ -2.79
COL18A1P39060 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.35□□□□□ -2.79
COL18A1P39060 MIR548AI-201ENST00000579940 88 ntBASIC-2.35□□□□□ -2.79
COL18A1P39060 MIR5588-201ENST00000581890 63 ntBASIC-2.35□□□□□ -2.79
COL18A1P39060 MIR1245B-201ENST00000636115 69 ntBASIC-2.35□□□□□ -2.79
COL18A1P39060 RNU6-640P-201ENST00000363693 105 ntBASIC-2.36□□□□□ -2.79
COL18A1P39060 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.36□□□□□ -2.79
COL18A1P39060 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.36□□□□□ -2.79
COL18A1P39060 MIR548M-201ENST00000408260 86 ntBASIC-2.36□□□□□ -2.79
COL18A1P39060 SNORD45.2-201ENST00000363552 72 ntBASIC-2.37□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms