Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RNU4-88P-201ENST00000411220 86 ntBASIC-1.82□□□□□ -2.7
XRCC1P18887 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.82□□□□□ -2.7
XRCC1P18887 SNORD1B-201ENST00000363091 84 ntBASIC-1.83□□□□□ -2.7
XRCC1P18887 RNU6-194P-201ENST00000363862 105 ntBASIC-1.83□□□□□ -2.7
XRCC1P18887 RNU6-258P-201ENST00000390884 101 ntBASIC-1.83□□□□□ -2.7
XRCC1P18887 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.83□□□□□ -2.7
XRCC1P18887 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.83□□□□□ -2.7
XRCC1P18887 MIR5588-201ENST00000581890 63 ntBASIC-1.83□□□□□ -2.7
XRCC1P18887 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.83□□□□□ -2.7
XRCC1P18887 RNU6-247P-201ENST00000362636 107 ntBASIC-1.84□□□□□ -2.7
XRCC1P18887 SNORD54-201ENST00000459159 67 ntBASIC-1.84□□□□□ -2.7
XRCC1P18887 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.85□□□□□ -2.71
XRCC1P18887 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.86□□□□□ -2.71
XRCC1P18887 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.86□□□□□ -2.71
XRCC1P18887 SNORD45A-201ENST00000384512 84 ntBASIC-1.86□□□□□ -2.71
XRCC1P18887 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.86□□□□□ -2.71
XRCC1P18887 RNU6-979P-201ENST00000383896 107 ntBASIC-1.87□□□□□ -2.71
XRCC1P18887 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.87□□□□□ -2.71
XRCC1P18887 RNU6-995P-201ENST00000391244 107 ntBASIC-1.87□□□□□ -2.71
XRCC1P18887 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.87□□□□□ -2.71
XRCC1P18887 SNORA27.2-201ENST00000363365 126 ntBASIC-1.88□□□□□ -2.71
XRCC1P18887 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.88□□□□□ -2.71
XRCC1P18887 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.88□□□□□ -2.71
XRCC1P18887 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.89□□□□□ -2.71
XRCC1P18887 RNU7-151P-201ENST00000516930 53 ntBASIC-1.89□□□□□ -2.71
XRCC1P18887 MIR548AI-201ENST00000579940 88 ntBASIC-1.89□□□□□ -2.71
XRCC1P18887 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.9□□□□□ -2.71
XRCC1P18887 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.9□□□□□ -2.71
XRCC1P18887 RNU7-171P-201ENST00000459581 62 ntBASIC-1.9□□□□□ -2.71
XRCC1P18887 MIR664A-201ENST00000626086 82 ntBASIC-1.9□□□□□ -2.71
XRCC1P18887 SNORD115-31-201ENST00000365318 82 ntBASIC-1.91□□□□□ -2.72
XRCC1P18887 RNU6-49P-201ENST00000384256 107 ntBASIC-1.91□□□□□ -2.72
XRCC1P18887 AC013734.1-201ENST00000619329 111 ntBASIC-1.91□□□□□ -2.72
XRCC1P18887 RNU6-669P-201ENST00000365575 107 ntBASIC-1.92□□□□□ -2.72
XRCC1P18887 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.92□□□□□ -2.72
XRCC1P18887 RNA5SP89-201ENST00000410300 108 ntBASIC-1.92□□□□□ -2.72
XRCC1P18887 MIR7978-201ENST00000636158 59 ntBASIC-1.92□□□□□ -2.72
XRCC1P18887 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.93□□□□□ -2.72
XRCC1P18887 RNU6-44P-201ENST00000384045 107 ntBASIC-1.93□□□□□ -2.72
XRCC1P18887 MIR125B1-201ENST00000385236 88 ntBASIC-1.93□□□□□ -2.72
XRCC1P18887 RNU6-172P-201ENST00000411000 93 ntBASIC-1.93□□□□□ -2.72
XRCC1P18887 SNORD63.2-201ENST00000516303 64 ntBASIC-1.93□□□□□ -2.72
XRCC1P18887 AC005520.4-201ENST00000604337 90 ntBASIC-1.93□□□□□ -2.72
XRCC1P18887 MIR1245B-201ENST00000636115 69 ntBASIC-1.93□□□□□ -2.72
XRCC1P18887 RNU6-406P-201ENST00000516470 107 ntBASIC-1.94□□□□□ -2.72
XRCC1P18887 MIR548W-201ENST00000581970 74 ntBASIC-1.94□□□□□ -2.72
XRCC1P18887 RNU6-895P-201ENST00000384125 103 ntBASIC-1.95□□□□□ -2.72
XRCC1P18887 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.95□□□□□ -2.72
XRCC1P18887 MIR579-201ENST00000385221 98 ntBASIC-1.95□□□□□ -2.72
XRCC1P18887 MIR154-201ENST00000385243 84 ntBASIC-1.95□□□□□ -2.72
XRCC1P18887 RNU6-523P-201ENST00000516304 54 ntBASIC-1.95□□□□□ -2.72
XRCC1P18887 MIR4712-201ENST00000583750 82 ntBASIC-1.95□□□□□ -2.72
XRCC1P18887 SNORD116-24-201ENST00000384549 92 ntBASIC-1.96□□□□□ -2.72
XRCC1P18887 snoU13.10-201ENST00000459301 103 ntBASIC-1.96□□□□□ -2.72
XRCC1P18887 RNU6-70P-201ENST00000516438 60 ntBASIC-1.96□□□□□ -2.72
XRCC1P18887 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.96□□□□□ -2.72
XRCC1P18887 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.97□□□□□ -2.72
XRCC1P18887 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.97□□□□□ -2.72
XRCC1P18887 RNU6-242P-201ENST00000384359 107 ntBASIC-1.97□□□□□ -2.72
XRCC1P18887 U6.97-201ENST00000636904 101 ntBASIC-1.97□□□□□ -2.72
XRCC1P18887 RNY4P7-201ENST00000364600 96 ntBASIC-1.98□□□□□ -2.73
XRCC1P18887 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.98□□□□□ -2.73
XRCC1P18887 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2□□□□□ -2.73
XRCC1P18887 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2□□□□□ -2.73
XRCC1P18887 RNY4P30-201ENST00000410216 95 ntBASIC-2.01□□□□□ -2.73
XRCC1P18887 RNY3P8-201ENST00000411366 126 ntBASIC-2.01□□□□□ -2.73
XRCC1P18887 RNU7-160P-201ENST00000516660 62 ntBASIC-2.01□□□□□ -2.73
XRCC1P18887 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.01□□□□□ -2.73
XRCC1P18887 MIR450A2-201ENST00000385022 100 ntBASIC-2.02□□□□□ -2.73
XRCC1P18887 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.03□□□□□ -2.73
XRCC1P18887 RNU6-974P-201ENST00000384099 108 ntBASIC-2.03□□□□□ -2.73
XRCC1P18887 RNU6-542P-201ENST00000516405 103 ntBASIC-2.03□□□□□ -2.73
XRCC1P18887 MIR4748-201ENST00000578076 82 ntBASIC-2.03□□□□□ -2.73
XRCC1P18887 RNU6-92P-201ENST00000605893 104 ntBASIC-2.04□□□□□ -2.74
XRCC1P18887 SNORD18C-201ENST00000362704 69 ntBASIC-2.05□□□□□ -2.74
XRCC1P18887 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.05□□□□□ -2.74
XRCC1P18887 MIR466-201ENST00000580653 84 ntBASIC-2.05□□□□□ -2.74
XRCC1P18887 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.06□□□□□ -2.74
XRCC1P18887 RNU6-153P-201ENST00000364422 104 ntBASIC-2.06□□□□□ -2.74
XRCC1P18887 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.06□□□□□ -2.74
XRCC1P18887 MIR4666B-201ENST00000578142 81 ntBASIC-2.06□□□□□ -2.74
XRCC1P18887 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.07□□□□□ -2.74
XRCC1P18887 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.07□□□□□ -2.74
XRCC1P18887 RNU6-230P-201ENST00000362457 104 ntBASIC-2.08□□□□□ -2.74
XRCC1P18887 RNU6-520P-201ENST00000384717 104 ntBASIC-2.08□□□□□ -2.74
XRCC1P18887 MIR581-201ENST00000384895 96 ntBASIC-2.08□□□□□ -2.74
XRCC1P18887 MIR494-201ENST00000349529 81 ntBASIC-2.09□□□□□ -2.74
XRCC1P18887 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.09□□□□□ -2.74
XRCC1P18887 RNU6-828P-201ENST00000364876 107 ntBASIC-2.09□□□□□ -2.74
XRCC1P18887 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.09□□□□□ -2.74
XRCC1P18887 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.09□□□□□ -2.74
XRCC1P18887 MIR7110-201ENST00000612638 86 ntBASIC-2.09□□□□□ -2.74
XRCC1P18887 RNU6-294P-201ENST00000364999 102 ntBASIC-2.1□□□□□ -2.75
XRCC1P18887 SNORD60.1-201ENST00000362451 73 ntBASIC-2.11□□□□□ -2.75
XRCC1P18887 SNORD60-201ENST00000383903 83 ntBASIC-2.11□□□□□ -2.75
XRCC1P18887 RNU6-687P-201ENST00000516443 89 ntBASIC-2.11□□□□□ -2.75
XRCC1P18887 MIR3134-201ENST00000579433 74 ntBASIC-2.11□□□□□ -2.75
XRCC1P18887 FTX_4.1-201ENST00000616291 147 ntBASIC-2.11□□□□□ -2.75
XRCC1P18887 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.11□□□□□ -2.75
XRCC1P18887 RNU6-820P-201ENST00000384273 107 ntBASIC-2.12□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms