Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MTATP8P2-201ENST00000435212 202 ntBASIC-5.63□□□□□ -3.31
HMGA1P17096 MIR4668-201ENST00000582284 70 ntBASIC-5.63□□□□□ -3.31
HMGA1P17096 Y_RNA.107-201ENST00000363190 121 ntBASIC-5.64□□□□□ -3.31
HMGA1P17096 RNU6-1020P-201ENST00000363684 107 ntBASIC-5.64□□□□□ -3.31
HMGA1P17096 Y_RNA.516-201ENST00000384541 124 ntBASIC-5.64□□□□□ -3.31
HMGA1P17096 AC141273.2-201ENST00000618989 130 ntBASIC-5.64□□□□□ -3.31
HMGA1P17096 Y_RNA.70-201ENST00000362886 110 ntBASIC-5.65□□□□□ -3.31
HMGA1P17096 RNU6-1024P-201ENST00000384199 107 ntBASIC-5.65□□□□□ -3.31
HMGA1P17096 MIR590-201ENST00000385008 97 ntBASIC-5.67□□□□□ -3.32
HMGA1P17096 SNORA81.3-201ENST00000517283 198 ntBASIC-5.67□□□□□ -3.32
HMGA1P17096 RNU6-1326P-201ENST00000391262 107 ntBASIC-5.68□□□□□ -3.32
HMGA1P17096 RNU6-380P-201ENST00000410207 107 ntBASIC-5.68□□□□□ -3.32
HMGA1P17096 Y_RNA.459-201ENST00000384251 102 ntBASIC-5.69□□□□□ -3.32
HMGA1P17096 MIR154-201ENST00000385243 84 ntBASIC-5.69□□□□□ -3.32
HMGA1P17096 RNU6-1255P-201ENST00000363434 112 ntBASIC-5.7□□□□□ -3.32
HMGA1P17096 RNU6-627P-201ENST00000364032 102 ntBASIC-5.71□□□□□ -3.32
HMGA1P17096 Y_RNA.406-201ENST00000383984 100 ntBASIC-5.71□□□□□ -3.32
HMGA1P17096 SCARNA15.1-201ENST00000516384 125 ntBASIC-5.72□□□□□ -3.33
HMGA1P17096 AC090425.1-201ENST00000610007 140 ntBASIC-5.72□□□□□ -3.33
HMGA1P17096 Y_RNA.345-201ENST00000365384 92 ntBASIC-5.73□□□□□ -3.33
HMGA1P17096 RNU6-109P-201ENST00000516364 107 ntBASIC-5.73□□□□□ -3.33
HMGA1P17096 RNU6-184P-201ENST00000516514 107 ntBASIC-5.73□□□□□ -3.33
HMGA1P17096 MIR8062-201ENST00000621515 85 ntBASIC-5.73□□□□□ -3.33
HMGA1P17096 MIR548F1-201ENST00000408667 84 ntBASIC-5.74□□□□□ -3.33
HMGA1P17096 SNORD33.1-201ENST00000516213 88 ntBASIC-5.74□□□□□ -3.33
HMGA1P17096 RNU6-122P-201ENST00000516818 107 ntBASIC-5.74□□□□□ -3.33
HMGA1P17096 Y_RNA.722-201ENST00000517279 114 ntBASIC-5.74□□□□□ -3.33
HMGA1P17096 Y_RNA.272-201ENST00000364696 102 ntBASIC-5.75□□□□□ -3.33
HMGA1P17096 RNU6-1107P-201ENST00000364817 104 ntBASIC-5.76□□□□□ -3.33
HMGA1P17096 Y_RNA.290-201ENST00000364879 114 ntBASIC-5.76□□□□□ -3.33
HMGA1P17096 SNORA33.2-201ENST00000365413 134 ntBASIC-5.77□□□□□ -3.33
HMGA1P17096 Y_RNA.620-201ENST00000411009 88 ntBASIC-5.78□□□□□ -3.33
HMGA1P17096 MIR548BB-201ENST00000626714 66 ntBASIC-5.78□□□□□ -3.33
HMGA1P17096 RNU6-1135P-201ENST00000411083 103 ntBASIC-5.8□□□□□ -3.34
HMGA1P17096 MIR548X2-201ENST00000579776 100 ntBASIC-5.8□□□□□ -3.34
HMGA1P17096 U4.5-201ENST00000617137 123 ntBASIC-5.8□□□□□ -3.34
HMGA1P17096 RNY3P1-201ENST00000365085 102 ntBASIC-5.81□□□□□ -3.34
HMGA1P17096 RNU7-107P-201ENST00000459121 61 ntBASIC-5.82□□□□□ -3.34
HMGA1P17096 Y_RNA.93-201ENST00000363066 109 ntBASIC-5.83□□□□□ -3.34
HMGA1P17096 Y_RNA.611-201ENST00000410682 108 ntBASIC-5.83□□□□□ -3.34
HMGA1P17096 SNORD116-18-201ENST00000383961 92 ntBASIC-5.85□□□□□ -3.35
HMGA1P17096 RNU6-1008P-201ENST00000384160 104 ntBASIC-5.85□□□□□ -3.35
HMGA1P17096 RNU6-70P-201ENST00000516438 60 ntBASIC-5.86□□□□□ -3.35
HMGA1P17096 MT-TL1-201ENST00000386347 75 ntBASIC-5.87□□□□□ -3.35
HMGA1P17096 MIR548X-201ENST00000580069 75 ntBASIC-5.88□□□□□ -3.35
HMGA1P17096 MIR4680-201ENST00000580906 66 ntBASIC-5.88□□□□□ -3.35
HMGA1P17096 Y_RNA.717-201ENST00000517106 92 ntBASIC-5.89□□□□□ -3.35
HMGA1P17096 SNORA25.5-201ENST00000363782 126 ntBASIC-5.91□□□□□ -3.36
HMGA1P17096 SNORA19-201ENST00000384737 128 ntBASIC-5.91□□□□□ -3.36
HMGA1P17096 RNU6-219P-201ENST00000364728 107 ntBASIC-5.92□□□□□ -3.36
HMGA1P17096 SNORD116-22-201ENST00000384430 92 ntBASIC-5.92□□□□□ -3.36
HMGA1P17096 MIR569-201ENST00000385228 96 ntBASIC-5.93□□□□□ -3.36
HMGA1P17096 MIR1302-5-201ENST00000408164 150 ntBASIC-5.93□□□□□ -3.36
HMGA1P17096 RNU4-71P-201ENST00000516258 113 ntBASIC-5.93□□□□□ -3.36
HMGA1P17096 MIR3974-201ENST00000637126 96 ntBASIC-5.94□□□□□ -3.36
HMGA1P17096 MIR548AL-201ENST00000578416 97 ntBASIC-5.95□□□□□ -3.36
HMGA1P17096 Y_RNA.200-201ENST00000364018 102 ntBASIC-5.96□□□□□ -3.36
HMGA1P17096 SNORD58.1-201ENST00000391313 66 ntBASIC-5.96□□□□□ -3.36
HMGA1P17096 RNU6-635P-201ENST00000516651 102 ntBASIC-5.96□□□□□ -3.36
HMGA1P17096 AC072026.1-201ENST00000605023 201 ntBASIC-5.96□□□□□ -3.36
HMGA1P17096 MIR3914-2-201ENST00000637339 95 ntBASIC-5.96□□□□□ -3.36
HMGA1P17096 MIR494-201ENST00000349529 81 ntBASIC-5.97□□□□□ -3.37
HMGA1P17096 RNU6-808P-201ENST00000391233 108 ntBASIC-5.98□□□□□ -3.37
HMGA1P17096 MTND3P3-201ENST00000505004 126 ntBASIC-5.98□□□□□ -3.37
HMGA1P17096 Y_RNA.818-201ENST00000618813 71 ntBASIC-5.98□□□□□ -3.37
HMGA1P17096 RNU6-497P-201ENST00000365316 104 ntBASIC-5.99□□□□□ -3.37
HMGA1P17096 RNU6-1137P-201ENST00000517073 99 ntBASIC-6□□□□□ -3.37
HMGA1P17096 RNU6-620P-201ENST00000384017 96 ntBASIC-6.01□□□□□ -3.37
HMGA1P17096 Y_RNA.20-201ENST00000362479 113 ntBASIC-6.02□□□□□ -3.37
HMGA1P17096 SNORD42.2-201ENST00000365570 69 ntBASIC-6.02□□□□□ -3.37
HMGA1P17096 Y_RNA.431-201ENST00000384086 102 ntBASIC-6.02□□□□□ -3.37
HMGA1P17096 AC006160.2-201ENST00000637708 154 ntBASIC-6.02□□□□□ -3.37
HMGA1P17096 RNU6-426P-201ENST00000516464 97 ntBASIC-6.03□□□□□ -3.37
HMGA1P17096 AC004792.1-201ENST00000614523 137 ntBASIC-6.03□□□□□ -3.37
HMGA1P17096 MTND4LP9-201ENST00000427694 174 ntBASIC-6.04□□□□□ -3.38
HMGA1P17096 Y_RNA.662-201ENST00000516028 97 ntBASIC-6.04□□□□□ -3.38
HMGA1P17096 AL589823.1-201ENST00000429577 183 ntBASIC-6.05□□□□□ -3.38
HMGA1P17096 U6.95-201ENST00000636931 70 ntBASIC-6.05□□□□□ -3.38
HMGA1P17096 SNORD116-21-201ENST00000384507 92 ntBASIC-6.06□□□□□ -3.38
HMGA1P17096 RNU6-1204P-201ENST00000363948 107 ntBASIC-6.07□□□□□ -3.38
HMGA1P17096 RNU6-474P-201ENST00000384243 107 ntBASIC-6.07□□□□□ -3.38
HMGA1P17096 RNU6-315P-201ENST00000362666 107 ntBASIC-6.09□□□□□ -3.38
HMGA1P17096 SNORD113-1-201ENST00000365321 69 ntBASIC-6.09□□□□□ -3.38
HMGA1P17096 MIR3938-201ENST00000582157 103 ntBASIC-6.09□□□□□ -3.38
HMGA1P17096 RNU6-797P-201ENST00000363101 109 ntBASIC-6.1□□□□□ -3.39
HMGA1P17096 RNU6-411P-201ENST00000384451 107 ntBASIC-6.1□□□□□ -3.39
HMGA1P17096 Y_RNA.580-201ENST00000391004 95 ntBASIC-6.11□□□□□ -3.39
HMGA1P17096 Y_RNA.194-201ENST00000363985 102 ntBASIC-6.12□□□□□ -3.39
HMGA1P17096 MTATP8P1-201ENST00000467115 207 ntBASIC-6.12□□□□□ -3.39
HMGA1P17096 RNU6-111P-201ENST00000517179 105 ntBASIC-6.12□□□□□ -3.39
HMGA1P17096 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-6.12□□□□□ -3.39
HMGA1P17096 RNU6-985P-201ENST00000410182 104 ntBASIC-6.13□□□□□ -3.39
HMGA1P17096 Y_RNA.712-201ENST00000517011 92 ntBASIC-6.13□□□□□ -3.39
HMGA1P17096 Y_RNA.720-201ENST00000517166 92 ntBASIC-6.13□□□□□ -3.39
HMGA1P17096 Y_RNA.356-201ENST00000365475 113 ntBASIC-6.14□□□□□ -3.39
HMGA1P17096 Y_RNA.788-201ENST00000622394 112 ntBASIC-6.15□□□□□ -3.39
HMGA1P17096 RNU6-907P-201ENST00000390924 102 ntBASIC-6.16□□□□□ -3.4
HMGA1P17096 RNU6-255P-201ENST00000516957 105 ntBASIC-6.16□□□□□ -3.4
HMGA1P17096 RNU6-940P-201ENST00000363433 104 ntBASIC-6.17□□□□□ -3.4
HMGA1P17096 RNU6-59P-201ENST00000384787 107 ntBASIC-6.17□□□□□ -3.4
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms