Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.76□□□□□ -2.69
VIMP08670 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.77□□□□□ -2.69
VIMP08670 RNU4-88P-201ENST00000411220 86 ntBASIC-1.77□□□□□ -2.69
VIMP08670 MIR548AM-201ENST00000584298 74 ntBASIC-1.77□□□□□ -2.69
VIMP08670 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.78□□□□□ -2.69
VIMP08670 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.78□□□□□ -2.69
VIMP08670 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.78□□□□□ -2.69
VIMP08670 RNU6-44P-201ENST00000384045 107 ntBASIC-1.78□□□□□ -2.69
VIMP08670 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.78□□□□□ -2.69
VIMP08670 IGLL4P-201ENST00000614590 133 ntBASIC-1.78□□□□□ -2.69
VIMP08670 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.78□□□□□ -2.69
VIMP08670 SNORD1B-201ENST00000363091 84 ntBASIC-1.79□□□□□ -2.7
VIMP08670 SNORA41B-201ENST00000384785 128 ntBASIC-1.79□□□□□ -2.7
VIMP08670 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.79□□□□□ -2.7
VIMP08670 RNA5SP93-201ENST00000362525 114 ntBASIC-1.8□□□□□ -2.7
VIMP08670 SNORA27.2-201ENST00000363365 126 ntBASIC-1.81□□□□□ -2.7
VIMP08670 RNY1P1-201ENST00000364372 112 ntBASIC-1.81□□□□□ -2.7
VIMP08670 RNU6-49P-201ENST00000384256 107 ntBASIC-1.81□□□□□ -2.7
VIMP08670 RNU6-315P-201ENST00000362666 107 ntBASIC-1.82□□□□□ -2.7
VIMP08670 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.82□□□□□ -2.7
VIMP08670 RNU6-258P-201ENST00000390884 101 ntBASIC-1.82□□□□□ -2.7
VIMP08670 MIR5588-201ENST00000581890 63 ntBASIC-1.82□□□□□ -2.7
VIMP08670 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.83□□□□□ -2.7
VIMP08670 RNA5SP89-201ENST00000410300 108 ntBASIC-1.83□□□□□ -2.7
VIMP08670 SNORD63.2-201ENST00000516303 64 ntBASIC-1.83□□□□□ -2.7
VIMP08670 RNU6-406P-201ENST00000516470 107 ntBASIC-1.83□□□□□ -2.7
VIMP08670 RNU7-151P-201ENST00000516930 53 ntBASIC-1.83□□□□□ -2.7
VIMP08670 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.84□□□□□ -2.7
VIMP08670 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.85□□□□□ -2.71
VIMP08670 MIR579-201ENST00000385221 98 ntBASIC-1.85□□□□□ -2.71
VIMP08670 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.86□□□□□ -2.71
VIMP08670 RNU6-669P-201ENST00000365575 107 ntBASIC-1.86□□□□□ -2.71
VIMP08670 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.86□□□□□ -2.71
VIMP08670 MIR548AI-201ENST00000579940 88 ntBASIC-1.86□□□□□ -2.71
VIMP08670 MIR466-201ENST00000580653 84 ntBASIC-1.86□□□□□ -2.71
VIMP08670 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.87□□□□□ -2.71
VIMP08670 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.87□□□□□ -2.71
VIMP08670 RNU6-979P-201ENST00000383896 107 ntBASIC-1.87□□□□□ -2.71
VIMP08670 RNU6-172P-201ENST00000411000 93 ntBASIC-1.87□□□□□ -2.71
VIMP08670 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.87□□□□□ -2.71
VIMP08670 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.88□□□□□ -2.71
VIMP08670 AC013734.1-201ENST00000619329 111 ntBASIC-1.88□□□□□ -2.71
VIMP08670 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.88□□□□□ -2.71
VIMP08670 MIR7978-201ENST00000636158 59 ntBASIC-1.89□□□□□ -2.71
VIMP08670 U6.97-201ENST00000636904 101 ntBASIC-1.89□□□□□ -2.71
VIMP08670 RNY4P7-201ENST00000364600 96 ntBASIC-1.91□□□□□ -2.72
VIMP08670 RNU6-895P-201ENST00000384125 103 ntBASIC-1.91□□□□□ -2.72
VIMP08670 MIR154-201ENST00000385243 84 ntBASIC-1.91□□□□□ -2.72
VIMP08670 RNU6-523P-201ENST00000516304 54 ntBASIC-1.91□□□□□ -2.72
VIMP08670 MIR4748-201ENST00000578076 82 ntBASIC-1.91□□□□□ -2.72
VIMP08670 AC005520.4-201ENST00000604337 90 ntBASIC-1.91□□□□□ -2.72
VIMP08670 MIR125B1-201ENST00000385236 88 ntBASIC-1.92□□□□□ -2.72
VIMP08670 RNU6-70P-201ENST00000516438 60 ntBASIC-1.92□□□□□ -2.72
VIMP08670 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.93□□□□□ -2.72
VIMP08670 SNORD116-24-201ENST00000384549 92 ntBASIC-1.93□□□□□ -2.72
VIMP08670 RNY4P30-201ENST00000410216 95 ntBASIC-1.93□□□□□ -2.72
VIMP08670 RNY3P8-201ENST00000411366 126 ntBASIC-1.93□□□□□ -2.72
VIMP08670 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.93□□□□□ -2.72
VIMP08670 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.94□□□□□ -2.72
VIMP08670 RNU7-171P-201ENST00000459581 62 ntBASIC-1.94□□□□□ -2.72
VIMP08670 MIR4712-201ENST00000583750 82 ntBASIC-1.94□□□□□ -2.72
VIMP08670 SNORD18C-201ENST00000362704 69 ntBASIC-1.95□□□□□ -2.72
VIMP08670 RNU7-160P-201ENST00000516660 62 ntBASIC-1.95□□□□□ -2.72
VIMP08670 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.95□□□□□ -2.72
VIMP08670 SNORD115-31-201ENST00000365318 82 ntBASIC-1.96□□□□□ -2.72
VIMP08670 RNU6-230P-201ENST00000362457 104 ntBASIC-1.97□□□□□ -2.72
VIMP08670 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.97□□□□□ -2.72
VIMP08670 RNU6-542P-201ENST00000516405 103 ntBASIC-1.97□□□□□ -2.72
VIMP08670 MIR1245B-201ENST00000636115 69 ntBASIC-1.97□□□□□ -2.72
VIMP08670 SNORD60-201ENST00000383903 83 ntBASIC-1.98□□□□□ -2.73
VIMP08670 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.98□□□□□ -2.73
VIMP08670 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.98□□□□□ -2.73
VIMP08670 RNU6-92P-201ENST00000605893 104 ntBASIC-1.98□□□□□ -2.73
VIMP08670 RNU6-828P-201ENST00000364876 107 ntBASIC-1.99□□□□□ -2.73
VIMP08670 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.99□□□□□ -2.73
VIMP08670 RNU6-520P-201ENST00000384717 104 ntBASIC-1.99□□□□□ -2.73
VIMP08670 snoU13.10-201ENST00000459301 103 ntBASIC-1.99□□□□□ -2.73
VIMP08670 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.99□□□□□ -2.73
VIMP08670 Y_RNA.204-201ENST00000364112 102 ntBASIC-2□□□□□ -2.73
VIMP08670 RNU6-974P-201ENST00000384099 108 ntBASIC-2□□□□□ -2.73
VIMP08670 MIR3134-201ENST00000579433 74 ntBASIC-2□□□□□ -2.73
VIMP08670 MIR548W-201ENST00000581970 74 ntBASIC-2□□□□□ -2.73
VIMP08670 MIR494-201ENST00000349529 81 ntBASIC-2.01□□□□□ -2.73
VIMP08670 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.01□□□□□ -2.73
VIMP08670 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.01□□□□□ -2.73
VIMP08670 MIR7110-201ENST00000612638 86 ntBASIC-2.01□□□□□ -2.73
VIMP08670 FTX_4.1-201ENST00000616291 147 ntBASIC-2.01□□□□□ -2.73
VIMP08670 RNU6-649P-201ENST00000384463 107 ntBASIC-2.03□□□□□ -2.73
VIMP08670 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.03□□□□□ -2.73
VIMP08670 MIR202-201ENST00000362219 110 ntBASIC-2.04□□□□□ -2.74
VIMP08670 RNY4P9-201ENST00000363194 97 ntBASIC-2.04□□□□□ -2.74
VIMP08670 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.04□□□□□ -2.74
VIMP08670 RNU6-153P-201ENST00000364422 104 ntBASIC-2.04□□□□□ -2.74
VIMP08670 RNU6-242P-201ENST00000384359 107 ntBASIC-2.04□□□□□ -2.74
VIMP08670 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.04□□□□□ -2.74
VIMP08670 RNY4-201ENST00000516507 96 ntBASIC-2.04□□□□□ -2.74
VIMP08670 U2.22-201ENST00000636441 106 ntBASIC-2.04□□□□□ -2.74
VIMP08670 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.05□□□□□ -2.74
VIMP08670 SNORD60.1-201ENST00000362451 73 ntBASIC-2.06□□□□□ -2.74
VIMP08670 RNU6-810P-201ENST00000364001 107 ntBASIC-2.06□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 246.3 ms