Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SNORA40.13-201ENST00000516379 120 ntBASIC-3.03□□□□□ -2.89
HLA-DQB2P05538 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.04□□□□□ -2.9
HLA-DQB2P05538 RNU6-828P-201ENST00000364876 107 ntBASIC-3.04□□□□□ -2.9
HLA-DQB2P05538 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.04□□□□□ -2.9
HLA-DQB2P05538 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.04□□□□□ -2.9
HLA-DQB2P05538 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.04□□□□□ -2.9
HLA-DQB2P05538 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.04□□□□□ -2.9
HLA-DQB2P05538 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.04□□□□□ -2.9
HLA-DQB2P05538 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.04□□□□□ -2.9
HLA-DQB2P05538 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.04□□□□□ -2.9
HLA-DQB2P05538 SNORD116-24-201ENST00000384549 92 ntBASIC-3.05□□□□□ -2.9
HLA-DQB2P05538 MIR154-201ENST00000385243 84 ntBASIC-3.06□□□□□ -2.9
HLA-DQB2P05538 AC008267.6-201ENST00000441664 139 ntBASIC-3.06□□□□□ -2.9
HLA-DQB2P05538 RNU6-315P-201ENST00000362666 107 ntBASIC-3.07□□□□□ -2.9
HLA-DQB2P05538 MIR548N-201ENST00000408742 75 ntBASIC-3.07□□□□□ -2.9
HLA-DQB2P05538 MIR7110-201ENST00000612638 86 ntBASIC-3.07□□□□□ -2.9
HLA-DQB2P05538 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.08□□□□□ -2.9
HLA-DQB2P05538 RNU6-1056P-201ENST00000383996 107 ntBASIC-3.08□□□□□ -2.9
HLA-DQB2P05538 RNU6-675P-201ENST00000384236 104 ntBASIC-3.08□□□□□ -2.9
HLA-DQB2P05538 RNU6-92P-201ENST00000605893 104 ntBASIC-3.08□□□□□ -2.9
HLA-DQB2P05538 SNORA17.4-201ENST00000391287 132 ntBASIC-3.09□□□□□ -2.9
HLA-DQB2P05538 Y_RNA.607-201ENST00000410597 98 ntBASIC-3.09□□□□□ -2.9
HLA-DQB2P05538 RNU6-810P-201ENST00000364001 107 ntBASIC-3.1□□□□□ -2.91
HLA-DQB2P05538 Y_RNA.228-201ENST00000364346 98 ntBASIC-3.1□□□□□ -2.91
HLA-DQB2P05538 Y_RNA.273-201ENST00000364703 102 ntBASIC-3.11□□□□□ -2.91
HLA-DQB2P05538 RNU6-959P-201ENST00000384671 107 ntBASIC-3.11□□□□□ -2.91
HLA-DQB2P05538 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.11□□□□□ -2.91
HLA-DQB2P05538 RNU6-542P-201ENST00000516405 103 ntBASIC-3.11□□□□□ -2.91
HLA-DQB2P05538 RNU6-70P-201ENST00000516438 60 ntBASIC-3.11□□□□□ -2.91
HLA-DQB2P05538 AL365222.1-201ENST00000614661 98 ntBASIC-3.11□□□□□ -2.91
HLA-DQB2P05538 RNU6-844P-201ENST00000517175 102 ntBASIC-3.12□□□□□ -2.91
HLA-DQB2P05538 RNA5SP93-201ENST00000362525 114 ntBASIC-3.13□□□□□ -2.91
HLA-DQB2P05538 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.13□□□□□ -2.91
HLA-DQB2P05538 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.13□□□□□ -2.91
HLA-DQB2P05538 SNORD116.2-201ENST00000391251 93 ntBASIC-3.13□□□□□ -2.91
HLA-DQB2P05538 Y_RNA.709-201ENST00000516952 92 ntBASIC-3.13□□□□□ -2.91
HLA-DQB2P05538 RNY4P9-201ENST00000363194 97 ntBASIC-3.14□□□□□ -2.91
HLA-DQB2P05538 MIR488-201ENST00000365739 83 ntBASIC-3.14□□□□□ -2.91
HLA-DQB2P05538 MIR548AI-201ENST00000579940 88 ntBASIC-3.14□□□□□ -2.91
HLA-DQB2P05538 RNU6-361P-201ENST00000364454 107 ntBASIC-3.15□□□□□ -2.91
HLA-DQB2P05538 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.15□□□□□ -2.91
HLA-DQB2P05538 RNU6-231P-201ENST00000517122 103 ntBASIC-3.15□□□□□ -2.91
HLA-DQB2P05538 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.15□□□□□ -2.91
HLA-DQB2P05538 SNORD60.1-201ENST00000362451 73 ntBASIC-3.16□□□□□ -2.92
HLA-DQB2P05538 RNY4P7-201ENST00000364600 96 ntBASIC-3.16□□□□□ -2.92
HLA-DQB2P05538 MIR3133-201ENST00000583157 78 ntBASIC-3.16□□□□□ -2.92
HLA-DQB2P05538 RNU6-834P-201ENST00000362367 110 ntBASIC-3.17□□□□□ -2.92
HLA-DQB2P05538 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.17□□□□□ -2.92
HLA-DQB2P05538 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.17□□□□□ -2.92
HLA-DQB2P05538 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.17□□□□□ -2.92
HLA-DQB2P05538 RNU6-530P-201ENST00000391180 107 ntBASIC-3.17□□□□□ -2.92
HLA-DQB2P05538 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.17□□□□□ -2.92
HLA-DQB2P05538 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.18□□□□□ -2.92
HLA-DQB2P05538 Y_RNA.703-201ENST00000516846 111 ntBASIC-3.18□□□□□ -2.92
HLA-DQB2P05538 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.19□□□□□ -2.92
HLA-DQB2P05538 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.19□□□□□ -2.92
HLA-DQB2P05538 SNORD113-3-201ENST00000364830 72 ntBASIC-3.19□□□□□ -2.92
HLA-DQB2P05538 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.19□□□□□ -2.92
HLA-DQB2P05538 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.2□□□□□ -2.92
HLA-DQB2P05538 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.21□□□□□ -2.92
HLA-DQB2P05538 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.21□□□□□ -2.92
HLA-DQB2P05538 RNU6-912P-201ENST00000363800 104 ntBASIC-3.23□□□□□ -2.93
HLA-DQB2P05538 SNORA40B-201ENST00000385573 128 ntBASIC-3.23□□□□□ -2.93
HLA-DQB2P05538 IGLL4P-201ENST00000614590 133 ntBASIC-3.23□□□□□ -2.93
HLA-DQB2P05538 MIR379-201ENST00000362218 67 ntBASIC-3.24□□□□□ -2.93
HLA-DQB2P05538 MIR5588-201ENST00000581890 63 ntBASIC-3.24□□□□□ -2.93
HLA-DQB2P05538 RNU6-640P-201ENST00000363693 105 ntBASIC-3.25□□□□□ -2.93
HLA-DQB2P05538 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.25□□□□□ -2.93
HLA-DQB2P05538 RNU6-141P-201ENST00000410499 105 ntBASIC-3.25□□□□□ -2.93
HLA-DQB2P05538 MIR4426-201ENST00000640330 63 ntBASIC-3.25□□□□□ -2.93
HLA-DQB2P05538 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.26□□□□□ -2.93
HLA-DQB2P05538 MIR4712-201ENST00000583750 82 ntBASIC-3.26□□□□□ -2.93
HLA-DQB2P05538 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.27□□□□□ -2.93
HLA-DQB2P05538 AC090425.1-201ENST00000610007 140 ntBASIC-3.27□□□□□ -2.93
HLA-DQB2P05538 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.27□□□□□ -2.93
HLA-DQB2P05538 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.27□□□□□ -2.93
HLA-DQB2P05538 SNORD45.2-201ENST00000363552 72 ntBASIC-3.28□□□□□ -2.93
HLA-DQB2P05538 MIR3134-201ENST00000579433 74 ntBASIC-3.28□□□□□ -2.93
HLA-DQB2P05538 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.29□□□□□ -2.94
HLA-DQB2P05538 RNU6-979P-201ENST00000383896 107 ntBASIC-3.3□□□□□ -2.94
HLA-DQB2P05538 RNU6-1168P-201ENST00000390831 104 ntBASIC-3.3□□□□□ -2.94
HLA-DQB2P05538 RNU6-300P-201ENST00000459080 104 ntBASIC-3.3□□□□□ -2.94
HLA-DQB2P05538 MIR1245B-201ENST00000636115 69 ntBASIC-3.3□□□□□ -2.94
HLA-DQB2P05538 RNU6-32P-201ENST00000383948 107 ntBASIC-3.31□□□□□ -2.94
HLA-DQB2P05538 Y_RNA.421-201ENST00000384052 101 ntBASIC-3.31□□□□□ -2.94
HLA-DQB2P05538 RNU6-13P-201ENST00000384248 107 ntBASIC-3.31□□□□□ -2.94
HLA-DQB2P05538 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.31□□□□□ -2.94
HLA-DQB2P05538 RNU6-12P-201ENST00000384604 107 ntBASIC-3.31□□□□□ -2.94
HLA-DQB2P05538 RNU6-41P-201ENST00000384741 107 ntBASIC-3.31□□□□□ -2.94
HLA-DQB2P05538 RNU6-687P-201ENST00000516443 89 ntBASIC-3.31□□□□□ -2.94
HLA-DQB2P05538 RNU6-68P-201ENST00000516576 104 ntBASIC-3.31□□□□□ -2.94
HLA-DQB2P05538 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.32□□□□□ -2.94
HLA-DQB2P05538 RNU6-81P-201ENST00000365608 104 ntBASIC-3.32□□□□□ -2.94
HLA-DQB2P05538 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.32□□□□□ -2.94
HLA-DQB2P05538 SNORA40.16-201ENST00000517238 121 ntBASIC-3.32□□□□□ -2.94
HLA-DQB2P05538 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.32□□□□□ -2.94
HLA-DQB2P05538 RNU6-590P-201ENST00000365039 107 ntBASIC-3.33□□□□□ -2.94
HLA-DQB2P05538 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.33□□□□□ -2.94
HLA-DQB2P05538 AL451105.1-201ENST00000450005 189 ntBASIC-3.33□□□□□ -2.94
HLA-DQB2P05538 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.34□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 729.2 ms