Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 MIR1245B-201ENST00000636115 69 ntBASIC-1.37□□□□□ -2.63
CCNKO75909 RNU6-228P-201ENST00000362700 106 ntBASIC-1.38□□□□□ -2.63
CCNKO75909 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.38□□□□□ -2.63
CCNKO75909 RNU6-258P-201ENST00000390884 101 ntBASIC-1.38□□□□□ -2.63
CCNKO75909 AC108019.1-201ENST00000512540 175 ntBASIC-1.38□□□□□ -2.63
CCNKO75909 MIR548AI-201ENST00000579940 88 ntBASIC-1.38□□□□□ -2.63
CCNKO75909 MIR496-201ENST00000385226 102 ntBASIC-1.39□□□□□ -2.63
CCNKO75909 MIR548AM-201ENST00000584298 74 ntBASIC-1.39□□□□□ -2.63
CCNKO75909 SNORD1B-201ENST00000363091 84 ntBASIC-1.4□□□□□ -2.63
CCNKO75909 SNORA41B-201ENST00000384785 128 ntBASIC-1.4□□□□□ -2.63
CCNKO75909 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.41□□□□□ -2.64
CCNKO75909 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.41□□□□□ -2.64
CCNKO75909 SNORA27.2-201ENST00000363365 126 ntBASIC-1.42□□□□□ -2.64
CCNKO75909 RNU6-153P-201ENST00000364422 104 ntBASIC-1.42□□□□□ -2.64
CCNKO75909 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.42□□□□□ -2.64
CCNKO75909 SNORD116-24-201ENST00000384549 92 ntBASIC-1.42□□□□□ -2.64
CCNKO75909 MIR154-201ENST00000385243 84 ntBASIC-1.42□□□□□ -2.64
CCNKO75909 SNORD63.2-201ENST00000516303 64 ntBASIC-1.42□□□□□ -2.64
CCNKO75909 RNU6-70P-201ENST00000516438 60 ntBASIC-1.42□□□□□ -2.64
CCNKO75909 RNU7-151P-201ENST00000516930 53 ntBASIC-1.42□□□□□ -2.64
CCNKO75909 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.42□□□□□ -2.64
CCNKO75909 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.43□□□□□ -2.64
CCNKO75909 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.43□□□□□ -2.64
CCNKO75909 MIR579-201ENST00000385221 98 ntBASIC-1.43□□□□□ -2.64
CCNKO75909 RNY4P30-201ENST00000410216 95 ntBASIC-1.43□□□□□ -2.64
CCNKO75909 MIR4756-201ENST00000577874 78 ntBASIC-1.43□□□□□ -2.64
CCNKO75909 U6.97-201ENST00000636904 101 ntBASIC-1.43□□□□□ -2.64
CCNKO75909 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.44□□□□□ -2.64
CCNKO75909 RNU6-669P-201ENST00000365575 107 ntBASIC-1.44□□□□□ -2.64
CCNKO75909 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.44□□□□□ -2.64
CCNKO75909 RNU6-980P-201ENST00000516925 103 ntBASIC-1.44□□□□□ -2.64
CCNKO75909 MIR664B-201ENST00000626756 61 ntBASIC-1.44□□□□□ -2.64
CCNKO75909 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.44□□□□□ -2.64
CCNKO75909 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.44□□□□□ -2.64
CCNKO75909 RNU6-895P-201ENST00000384125 103 ntBASIC-1.45□□□□□ -2.64
CCNKO75909 RNU6-242P-201ENST00000384359 107 ntBASIC-1.45□□□□□ -2.64
CCNKO75909 RNU6-172P-201ENST00000411000 93 ntBASIC-1.45□□□□□ -2.64
CCNKO75909 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.45□□□□□ -2.64
CCNKO75909 MIR4666B-201ENST00000578142 81 ntBASIC-1.45□□□□□ -2.64
CCNKO75909 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.45□□□□□ -2.64
CCNKO75909 AC013734.1-201ENST00000619329 111 ntBASIC-1.45□□□□□ -2.64
CCNKO75909 MIR494-201ENST00000349529 81 ntBASIC-1.46□□□□□ -2.64
CCNKO75909 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.46□□□□□ -2.64
CCNKO75909 MIR450A2-201ENST00000385022 100 ntBASIC-1.46□□□□□ -2.64
CCNKO75909 RNU4-88P-201ENST00000411220 86 ntBASIC-1.46□□□□□ -2.64
CCNKO75909 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.46□□□□□ -2.64
CCNKO75909 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.46□□□□□ -2.64
CCNKO75909 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.47□□□□□ -2.64
CCNKO75909 SNORD115-31-201ENST00000365318 82 ntBASIC-1.47□□□□□ -2.64
CCNKO75909 SNORD54-201ENST00000459159 67 ntBASIC-1.47□□□□□ -2.64
CCNKO75909 AC005520.4-201ENST00000604337 90 ntBASIC-1.47□□□□□ -2.64
CCNKO75909 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.47□□□□□ -2.64
CCNKO75909 RNY3P8-201ENST00000411366 126 ntBASIC-1.48□□□□□ -2.65
CCNKO75909 MIR7978-201ENST00000636158 59 ntBASIC-1.48□□□□□ -2.65
CCNKO75909 RNU6-523P-201ENST00000516304 54 ntBASIC-1.49□□□□□ -2.65
CCNKO75909 MIR3134-201ENST00000579433 74 ntBASIC-1.49□□□□□ -2.65
CCNKO75909 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.5□□□□□ -2.65
CCNKO75909 RNU6-294P-201ENST00000364999 102 ntBASIC-1.5□□□□□ -2.65
CCNKO75909 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.5□□□□□ -2.65
CCNKO75909 RNU6-687P-201ENST00000516443 89 ntBASIC-1.5□□□□□ -2.65
CCNKO75909 SNORD18C-201ENST00000362704 69 ntBASIC-1.51□□□□□ -2.65
CCNKO75909 RNU6-194P-201ENST00000363862 105 ntBASIC-1.51□□□□□ -2.65
CCNKO75909 MIR125B1-201ENST00000385236 88 ntBASIC-1.51□□□□□ -2.65
CCNKO75909 RNU6-542P-201ENST00000516405 103 ntBASIC-1.51□□□□□ -2.65
CCNKO75909 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.51□□□□□ -2.65
CCNKO75909 U2.22-201ENST00000636441 106 ntBASIC-1.51□□□□□ -2.65
CCNKO75909 RNU6-787P-201ENST00000384032 107 ntBASIC-1.52□□□□□ -2.65
CCNKO75909 snoU13.10-201ENST00000459301 103 ntBASIC-1.52□□□□□ -2.65
CCNKO75909 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.53□□□□□ -2.65
CCNKO75909 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.53□□□□□ -2.65
CCNKO75909 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.54□□□□□ -2.66
CCNKO75909 SNORD60-201ENST00000383903 83 ntBASIC-1.54□□□□□ -2.66
CCNKO75909 RNU6-974P-201ENST00000384099 108 ntBASIC-1.54□□□□□ -2.66
CCNKO75909 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.54□□□□□ -2.66
CCNKO75909 RNU6-520P-201ENST00000384717 104 ntBASIC-1.54□□□□□ -2.66
CCNKO75909 RNU6-118P-201ENST00000516552 102 ntBASIC-1.54□□□□□ -2.66
CCNKO75909 RNU7-160P-201ENST00000516660 62 ntBASIC-1.54□□□□□ -2.66
CCNKO75909 MIR548W-201ENST00000581970 74 ntBASIC-1.54□□□□□ -2.66
CCNKO75909 RNU6-820P-201ENST00000384273 107 ntBASIC-1.55□□□□□ -2.66
CCNKO75909 RNU6-411P-201ENST00000384451 107 ntBASIC-1.55□□□□□ -2.66
CCNKO75909 RNU6-649P-201ENST00000384463 107 ntBASIC-1.55□□□□□ -2.66
CCNKO75909 RNU6-92P-201ENST00000605893 104 ntBASIC-1.55□□□□□ -2.66
CCNKO75909 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.56□□□□□ -2.66
CCNKO75909 RNA5SP405-201ENST00000363059 114 ntBASIC-1.56□□□□□ -2.66
CCNKO75909 RNU6-828P-201ENST00000364876 107 ntBASIC-1.56□□□□□ -2.66
CCNKO75909 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.56□□□□□ -2.66
CCNKO75909 MIR466-201ENST00000580653 84 ntBASIC-1.56□□□□□ -2.66
CCNKO75909 MIR202-201ENST00000362219 110 ntBASIC-1.57□□□□□ -2.66
CCNKO75909 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.57□□□□□ -2.66
CCNKO75909 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.57□□□□□ -2.66
CCNKO75909 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.57□□□□□ -2.66
CCNKO75909 MIR5582-201ENST00000579697 68 ntBASIC-1.57□□□□□ -2.66
CCNKO75909 MIR7110-201ENST00000612638 86 ntBASIC-1.57□□□□□ -2.66
CCNKO75909 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.58□□□□□ -2.66
CCNKO75909 U7.4-201ENST00000614961 63 ntBASIC-1.59□□□□□ -2.66
CCNKO75909 SNORD60.1-201ENST00000362451 73 ntBASIC-1.6□□□□□ -2.67
CCNKO75909 RNA5SP93-201ENST00000362525 114 ntBASIC-1.6□□□□□ -2.67
CCNKO75909 RNU6-810P-201ENST00000364001 107 ntBASIC-1.6□□□□□ -2.67
CCNKO75909 SNORD116.2-201ENST00000391251 93 ntBASIC-1.6□□□□□ -2.67
CCNKO75909 AC097484.2-201ENST00000509147 251 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms