Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.25□□□□□ -2.61
NKX2-6A6NCS4 MIR4520-1-201ENST00000582609 70 ntBASIC-1.25□□□□□ -2.61
NKX2-6A6NCS4 RNU6-573P-201ENST00000383938 106 ntBASIC-1.26□□□□□ -2.61
NKX2-6A6NCS4 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.26□□□□□ -2.61
NKX2-6A6NCS4 RNU6-983P-201ENST00000516004 103 ntBASIC-1.26□□□□□ -2.61
NKX2-6A6NCS4 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.26□□□□□ -2.61
NKX2-6A6NCS4 MIR3170-201ENST00000582699 77 ntBASIC-1.26□□□□□ -2.61
NKX2-6A6NCS4 SNORD73B-201ENST00000364394 72 ntBASIC-1.27□□□□□ -2.61
NKX2-6A6NCS4 RNY4P7-201ENST00000364600 96 ntBASIC-1.27□□□□□ -2.61
NKX2-6A6NCS4 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.27□□□□□ -2.61
NKX2-6A6NCS4 MIR548AA1-201ENST00000384971 97 ntBASIC-1.27□□□□□ -2.61
NKX2-6A6NCS4 MIR579-201ENST00000385221 98 ntBASIC-1.27□□□□□ -2.61
NKX2-6A6NCS4 RNA5SP170-201ENST00000517150 101 ntBASIC-1.27□□□□□ -2.61
NKX2-6A6NCS4 RNU6-411P-201ENST00000384451 107 ntBASIC-1.28□□□□□ -2.61
NKX2-6A6NCS4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
NKX2-6A6NCS4 U7.4-201ENST00000614961 63 ntBASIC-1.28□□□□□ -2.61
NKX2-6A6NCS4 RNA5SP86-201ENST00000390869 98 ntBASIC-1.29□□□□□ -2.62
NKX2-6A6NCS4 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.29□□□□□ -2.62
NKX2-6A6NCS4 RNU7-151P-201ENST00000516930 53 ntBASIC-1.29□□□□□ -2.62
NKX2-6A6NCS4 SNORD18.1-201ENST00000363807 70 ntBASIC-1.31□□□□□ -2.62
NKX2-6A6NCS4 RNU6-258P-201ENST00000390884 101 ntBASIC-1.31□□□□□ -2.62
NKX2-6A6NCS4 RNU6-172P-201ENST00000411000 93 ntBASIC-1.31□□□□□ -2.62
NKX2-6A6NCS4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.31□□□□□ -2.62
NKX2-6A6NCS4 RNU6-247P-201ENST00000362636 107 ntBASIC-1.32□□□□□ -2.62
NKX2-6A6NCS4 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.32□□□□□ -2.62
NKX2-6A6NCS4 AC018880.2-201ENST00000414265 201 ntBASIC-1.32□□□□□ -2.62
NKX2-6A6NCS4 RNU6-542P-201ENST00000516405 103 ntBASIC-1.32□□□□□ -2.62
NKX2-6A6NCS4 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.33□□□□□ -2.62
NKX2-6A6NCS4 MIR1255A-201ENST00000408338 113 ntBASIC-1.33□□□□□ -2.62
NKX2-6A6NCS4 RNU6-995P-201ENST00000391244 107 ntBASIC-1.34□□□□□ -2.62
NKX2-6A6NCS4 RNY4P29-201ENST00000410801 97 ntBASIC-1.34□□□□□ -2.62
NKX2-6A6NCS4 RNU6-92P-201ENST00000605893 104 ntBASIC-1.34□□□□□ -2.62
NKX2-6A6NCS4 RNU6-228P-201ENST00000362700 106 ntBASIC-1.35□□□□□ -2.63
NKX2-6A6NCS4 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.35□□□□□ -2.63
NKX2-6A6NCS4 RNU6-663P-201ENST00000391105 106 ntBASIC-1.35□□□□□ -2.63
NKX2-6A6NCS4 MIR548H1-201ENST00000408610 102 ntBASIC-1.35□□□□□ -2.63
NKX2-6A6NCS4 RNU6-634P-201ENST00000459134 106 ntBASIC-1.35□□□□□ -2.63
NKX2-6A6NCS4 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.35□□□□□ -2.63
NKX2-6A6NCS4 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.36□□□□□ -2.63
NKX2-6A6NCS4 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.36□□□□□ -2.63
NKX2-6A6NCS4 SNORA26.2-201ENST00000390922 122 ntBASIC-1.36□□□□□ -2.63
NKX2-6A6NCS4 MIR7978-201ENST00000636158 59 ntBASIC-1.36□□□□□ -2.63
NKX2-6A6NCS4 SNORD60.1-201ENST00000362451 73 ntBASIC-1.37□□□□□ -2.63
NKX2-6A6NCS4 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.37□□□□□ -2.63
NKX2-6A6NCS4 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.37□□□□□ -2.63
NKX2-6A6NCS4 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.37□□□□□ -2.63
NKX2-6A6NCS4 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.37□□□□□ -2.63
NKX2-6A6NCS4 SNORD63.2-201ENST00000516303 64 ntBASIC-1.37□□□□□ -2.63
NKX2-6A6NCS4 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.37□□□□□ -2.63
NKX2-6A6NCS4 MIR3202-2-201ENST00000635980 79 ntBASIC-1.37□□□□□ -2.63
NKX2-6A6NCS4 RNU6-669P-201ENST00000365575 107 ntBASIC-1.38□□□□□ -2.63
NKX2-6A6NCS4 RNU6-523P-201ENST00000516304 54 ntBASIC-1.38□□□□□ -2.63
NKX2-6A6NCS4 RNU6-79P-201ENST00000362511 107 ntBASIC-1.39□□□□□ -2.63
NKX2-6A6NCS4 RNU6-563P-201ENST00000364872 108 ntBASIC-1.39□□□□□ -2.63
NKX2-6A6NCS4 MIR496-201ENST00000385226 102 ntBASIC-1.39□□□□□ -2.63
NKX2-6A6NCS4 RNU6-400P-201ENST00000391173 106 ntBASIC-1.39□□□□□ -2.63
NKX2-6A6NCS4 SNORD30.1-201ENST00000391309 70 ntBASIC-1.39□□□□□ -2.63
NKX2-6A6NCS4 RNU6-857P-201ENST00000515893 110 ntBASIC-1.39□□□□□ -2.63
NKX2-6A6NCS4 AC120024.2-201ENST00000576526 175 ntBASIC-1.39□□□□□ -2.63
NKX2-6A6NCS4 MIR23C-201ENST00000579846 100 ntBASIC-1.39□□□□□ -2.63
NKX2-6A6NCS4 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.39□□□□□ -2.63
NKX2-6A6NCS4 RNU6-974P-201ENST00000384099 108 ntBASIC-1.4□□□□□ -2.63
NKX2-6A6NCS4 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.41□□□□□ -2.64
NKX2-6A6NCS4 RNA5SP225-201ENST00000410874 135 ntBASIC-1.42□□□□□ -2.64
NKX2-6A6NCS4 RNU6-810P-201ENST00000364001 107 ntBASIC-1.44□□□□□ -2.64
NKX2-6A6NCS4 MIR125B1-201ENST00000385236 88 ntBASIC-1.44□□□□□ -2.64
NKX2-6A6NCS4 SNORD116.2-201ENST00000391251 93 ntBASIC-1.44□□□□□ -2.64
NKX2-6A6NCS4 RNU6-279P-201ENST00000391297 101 ntBASIC-1.45□□□□□ -2.64
NKX2-6A6NCS4 AC108019.1-201ENST00000512540 175 ntBASIC-1.45□□□□□ -2.64
NKX2-6A6NCS4 MIR7110-201ENST00000612638 86 ntBASIC-1.45□□□□□ -2.64
NKX2-6A6NCS4 MIR664B-201ENST00000626756 61 ntBASIC-1.45□□□□□ -2.64
NKX2-6A6NCS4 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.46□□□□□ -2.64
NKX2-6A6NCS4 SNORA25.4-201ENST00000363666 124 ntBASIC-1.46□□□□□ -2.64
NKX2-6A6NCS4 RNU6-231P-201ENST00000517122 103 ntBASIC-1.46□□□□□ -2.64
NKX2-6A6NCS4 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.47□□□□□ -2.64
NKX2-6A6NCS4 SNORA27.2-201ENST00000363365 126 ntBASIC-1.47□□□□□ -2.64
NKX2-6A6NCS4 SNORA25.5-201ENST00000363782 126 ntBASIC-1.47□□□□□ -2.64
NKX2-6A6NCS4 MIR487B-201ENST00000385021 84 ntBASIC-1.47□□□□□ -2.64
NKX2-6A6NCS4 SNORD78.1-201ENST00000390866 65 ntBASIC-1.47□□□□□ -2.64
NKX2-6A6NCS4 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.47□□□□□ -2.64
NKX2-6A6NCS4 AC005520.4-201ENST00000604337 90 ntBASIC-1.47□□□□□ -2.64
NKX2-6A6NCS4 RNU6-649P-201ENST00000384463 107 ntBASIC-1.48□□□□□ -2.65
NKX2-6A6NCS4 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.48□□□□□ -2.65
NKX2-6A6NCS4 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.48□□□□□ -2.65
NKX2-6A6NCS4 AC013734.1-201ENST00000619329 111 ntBASIC-1.48□□□□□ -2.65
NKX2-6A6NCS4 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.48□□□□□ -2.65
NKX2-6A6NCS4 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.49□□□□□ -2.65
NKX2-6A6NCS4 RNY3P8-201ENST00000411366 126 ntBASIC-1.49□□□□□ -2.65
NKX2-6A6NCS4 SNORD54-201ENST00000459159 67 ntBASIC-1.5□□□□□ -2.65
NKX2-6A6NCS4 RNU6-871P-201ENST00000516122 100 ntBASIC-1.5□□□□□ -2.65
NKX2-6A6NCS4 MIR4756-201ENST00000577874 78 ntBASIC-1.5□□□□□ -2.65
NKX2-6A6NCS4 U6.111-201ENST00000636093 83 ntBASIC-1.5□□□□□ -2.65
NKX2-6A6NCS4 RNU6-122P-201ENST00000516818 107 ntBASIC-1.51□□□□□ -2.65
NKX2-6A6NCS4 U6.97-201ENST00000636904 101 ntBASIC-1.51□□□□□ -2.65
NKX2-6A6NCS4 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.52□□□□□ -2.65
NKX2-6A6NCS4 RNU6-118P-201ENST00000516552 102 ntBASIC-1.52□□□□□ -2.65
NKX2-6A6NCS4 RNU7-160P-201ENST00000516660 62 ntBASIC-1.52□□□□□ -2.65
NKX2-6A6NCS4 RNU6-980P-201ENST00000516925 103 ntBASIC-1.52□□□□□ -2.65
NKX2-6A6NCS4 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.52□□□□□ -2.65
NKX2-6A6NCS4 MIR4679-1-201ENST00000637619 75 ntBASIC-1.52□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 203.1 ms