Protein–RNA interactions for Protein: A2RU48

SMCO3, Single-pass membrane and coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3A2RU48 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.1□□□□□ -2.91
SMCO3A2RU48 RNU6-895P-201ENST00000384125 103 ntBASIC-3.11□□□□□ -2.91
SMCO3A2RU48 RNU6-70P-201ENST00000516438 60 ntBASIC-3.11□□□□□ -2.91
SMCO3A2RU48 RNU4-88P-201ENST00000411220 86 ntBASIC-3.12□□□□□ -2.91
SMCO3A2RU48 RNU6-789P-201ENST00000517105 102 ntBASIC-3.12□□□□□ -2.91
SMCO3A2RU48 MIR1207-201ENST00000408249 87 ntBASIC-3.13□□□□□ -2.91
SMCO3A2RU48 MIR5588-201ENST00000581890 63 ntBASIC-3.13□□□□□ -2.91
SMCO3A2RU48 IGLL4P-201ENST00000614590 133 ntBASIC-3.13□□□□□ -2.91
SMCO3A2RU48 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.14□□□□□ -2.91
SMCO3A2RU48 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.14□□□□□ -2.91
SMCO3A2RU48 RNU6-980P-201ENST00000516925 103 ntBASIC-3.14□□□□□ -2.91
SMCO3A2RU48 RNY1P1-201ENST00000364372 112 ntBASIC-3.16□□□□□ -2.92
SMCO3A2RU48 RNU6-119P-201ENST00000364882 107 ntBASIC-3.16□□□□□ -2.92
SMCO3A2RU48 RNU6-979P-201ENST00000383896 107 ntBASIC-3.16□□□□□ -2.92
SMCO3A2RU48 MIR4723-201ENST00000585070 81 ntBASIC-3.16□□□□□ -2.92
SMCO3A2RU48 SNORD115-31-201ENST00000365318 82 ntBASIC-3.17□□□□□ -2.92
SMCO3A2RU48 RNU6-147P-201ENST00000383983 107 ntBASIC-3.18□□□□□ -2.92
SMCO3A2RU48 MIR4712-201ENST00000583750 82 ntBASIC-3.18□□□□□ -2.92
SMCO3A2RU48 RNU6-92P-201ENST00000605893 104 ntBASIC-3.18□□□□□ -2.92
SMCO3A2RU48 RNU6-542P-201ENST00000516405 103 ntBASIC-3.19□□□□□ -2.92
SMCO3A2RU48 RNA5SP405-201ENST00000363059 114 ntBASIC-3.2□□□□□ -2.92
SMCO3A2RU48 RNU6-118P-201ENST00000516552 102 ntBASIC-3.2□□□□□ -2.92
SMCO3A2RU48 RNU6-1247P-201ENST00000516622 98 ntBASIC-3.2□□□□□ -2.92
SMCO3A2RU48 RNU7-160P-201ENST00000516660 62 ntBASIC-3.2□□□□□ -2.92
SMCO3A2RU48 MIR548AI-201ENST00000579940 88 ntBASIC-3.2□□□□□ -2.92
SMCO3A2RU48 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.21□□□□□ -2.92
SMCO3A2RU48 snoU13.10-201ENST00000459301 103 ntBASIC-3.21□□□□□ -2.92
SMCO3A2RU48 MIR548W-201ENST00000581970 74 ntBASIC-3.21□□□□□ -2.92
SMCO3A2RU48 SNORD18C-201ENST00000362704 69 ntBASIC-3.22□□□□□ -2.92
SMCO3A2RU48 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.22□□□□□ -2.92
SMCO3A2RU48 MIR1245B-201ENST00000636115 69 ntBASIC-3.22□□□□□ -2.92
SMCO3A2RU48 RNU6-194P-201ENST00000363862 105 ntBASIC-3.23□□□□□ -2.93
SMCO3A2RU48 RNU6-520P-201ENST00000384717 104 ntBASIC-3.23□□□□□ -2.93
SMCO3A2RU48 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.23□□□□□ -2.93
SMCO3A2RU48 RNU7-171P-201ENST00000459581 62 ntBASIC-3.24□□□□□ -2.93
SMCO3A2RU48 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.24□□□□□ -2.93
SMCO3A2RU48 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.25□□□□□ -2.93
SMCO3A2RU48 RNU6-49P-201ENST00000384256 107 ntBASIC-3.25□□□□□ -2.93
SMCO3A2RU48 MIR548M-201ENST00000408260 86 ntBASIC-3.25□□□□□ -2.93
SMCO3A2RU48 MIR7110-201ENST00000612638 86 ntBASIC-3.25□□□□□ -2.93
SMCO3A2RU48 Y_RNA.211-201ENST00000364164 101 ntBASIC-3.26□□□□□ -2.93
SMCO3A2RU48 Y_RNA.591-201ENST00000410228 104 ntBASIC-3.26□□□□□ -2.93
SMCO3A2RU48 MIR3134-201ENST00000579433 74 ntBASIC-3.26□□□□□ -2.93
SMCO3A2RU48 SNORD60.1-201ENST00000362451 73 ntBASIC-3.27□□□□□ -2.93
SMCO3A2RU48 RNU6-828P-201ENST00000364876 107 ntBASIC-3.27□□□□□ -2.93
SMCO3A2RU48 MIR3139-201ENST00000579145 76 ntBASIC-3.27□□□□□ -2.93
SMCO3A2RU48 MIR3668-201ENST00000582138 75 ntBASIC-3.27□□□□□ -2.93
SMCO3A2RU48 Y_RNA.564-201ENST00000384708 106 ntBASIC-3.28□□□□□ -2.93
SMCO3A2RU48 MIR581-201ENST00000384895 96 ntBASIC-3.28□□□□□ -2.93
SMCO3A2RU48 RNU6-687P-201ENST00000516443 89 ntBASIC-3.28□□□□□ -2.93
SMCO3A2RU48 MIR202-201ENST00000362219 110 ntBASIC-3.29□□□□□ -2.94
SMCO3A2RU48 RNU6-810P-201ENST00000364001 107 ntBASIC-3.29□□□□□ -2.94
SMCO3A2RU48 Y_RNA.475-201ENST00000384345 101 ntBASIC-3.29□□□□□ -2.94
SMCO3A2RU48 SNORD60-201ENST00000383903 83 ntBASIC-3.3□□□□□ -2.94
SMCO3A2RU48 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.31□□□□□ -2.94
SMCO3A2RU48 RNU6-649P-201ENST00000384463 107 ntBASIC-3.31□□□□□ -2.94
SMCO3A2RU48 RNU6-231P-201ENST00000517122 103 ntBASIC-3.31□□□□□ -2.94
SMCO3A2RU48 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.32□□□□□ -2.94
SMCO3A2RU48 MT-TR-201ENST00000387439 65 ntBASIC-3.33□□□□□ -2.94
SMCO3A2RU48 MIR3910-1-201ENST00000580936 111 ntBASIC-3.33□□□□□ -2.94
SMCO3A2RU48 MIR3671-201ENST00000580455 88 ntBASIC-3.34□□□□□ -2.94
SMCO3A2RU48 MIR496-201ENST00000385226 102 ntBASIC-3.35□□□□□ -2.95
SMCO3A2RU48 SNORD116.2-201ENST00000391251 93 ntBASIC-3.35□□□□□ -2.95
SMCO3A2RU48 MIR548N-201ENST00000408742 75 ntBASIC-3.35□□□□□ -2.95
SMCO3A2RU48 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.36□□□□□ -2.95
SMCO3A2RU48 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.37□□□□□ -2.95
SMCO3A2RU48 MT-TM-201ENST00000387377 68 ntBASIC-3.38□□□□□ -2.95
SMCO3A2RU48 RNU6-215P-201ENST00000365169 102 ntBASIC-3.39□□□□□ -2.95
SMCO3A2RU48 SNORA17.4-201ENST00000391287 132 ntBASIC-3.39□□□□□ -2.95
SMCO3A2RU48 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.4□□□□□ -2.95
SMCO3A2RU48 SNORD20-201ENST00000384550 80 ntBASIC-3.4□□□□□ -2.95
SMCO3A2RU48 RNU6-919P-201ENST00000516731 104 ntBASIC-3.4□□□□□ -2.95
SMCO3A2RU48 RNU6-361P-201ENST00000364454 107 ntBASIC-3.41□□□□□ -2.96
SMCO3A2RU48 SNORD113-1-201ENST00000365321 69 ntBASIC-3.41□□□□□ -2.96
SMCO3A2RU48 Y_RNA.684-201ENST00000516510 99 ntBASIC-3.42□□□□□ -2.96
SMCO3A2RU48 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.43□□□□□ -2.96
SMCO3A2RU48 RNU6-411P-201ENST00000384451 107 ntBASIC-3.43□□□□□ -2.96
SMCO3A2RU48 SNORA40B-201ENST00000385573 128 ntBASIC-3.43□□□□□ -2.96
SMCO3A2RU48 RNA5SP89-201ENST00000410300 108 ntBASIC-3.43□□□□□ -2.96
SMCO3A2RU48 AC097484.2-201ENST00000509147 251 ntBASIC-3.43□□□□□ -2.96
SMCO3A2RU48 MIR466-201ENST00000580653 84 ntBASIC-3.43□□□□□ -2.96
SMCO3A2RU48 RNU6-242P-201ENST00000384359 107 ntBASIC-3.44□□□□□ -2.96
SMCO3A2RU48 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.44□□□□□ -2.96
SMCO3A2RU48 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.44□□□□□ -2.96
SMCO3A2RU48 MIR494-201ENST00000349529 81 ntBASIC-3.45□□□□□ -2.96
SMCO3A2RU48 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.45□□□□□ -2.96
SMCO3A2RU48 MIR4666B-201ENST00000578142 81 ntBASIC-3.45□□□□□ -2.96
SMCO3A2RU48 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.47□□□□□ -2.96
SMCO3A2RU48 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.47□□□□□ -2.96
SMCO3A2RU48 RNU6-530P-201ENST00000391180 107 ntBASIC-3.47□□□□□ -2.96
SMCO3A2RU48 SNORD54-201ENST00000459159 67 ntBASIC-3.47□□□□□ -2.96
SMCO3A2RU48 FTX_4.1-201ENST00000616291 147 ntBASIC-3.47□□□□□ -2.96
SMCO3A2RU48 MIR4748-201ENST00000578076 82 ntBASIC-3.48□□□□□ -2.97
SMCO3A2RU48 RNU6-122P-201ENST00000516818 107 ntBASIC-3.49□□□□□ -2.97
SMCO3A2RU48 SNORA40.16-201ENST00000517238 121 ntBASIC-3.49□□□□□ -2.97
SMCO3A2RU48 SNORA25.5-201ENST00000363782 126 ntBASIC-3.5□□□□□ -2.97
SMCO3A2RU48 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.5□□□□□ -2.97
SMCO3A2RU48 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.51□□□□□ -2.97
SMCO3A2RU48 RNU6-663P-201ENST00000391105 106 ntBASIC-3.51□□□□□ -2.97
SMCO3A2RU48 RNY4P30-201ENST00000410216 95 ntBASIC-3.51□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms