Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 SNORD83B-201ENST00000386745 93 ntBASIC-0.74□□□□□ -2.53
CDK11AQ9UQ88 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.74□□□□□ -2.53
CDK11AQ9UQ88 U6.58-201ENST00000613107 107 ntBASIC-0.74□□□□□ -2.53
CDK11AQ9UQ88 RNU6-228P-201ENST00000362700 106 ntBASIC-0.75□□□□□ -2.53
CDK11AQ9UQ88 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.75□□□□□ -2.53
CDK11AQ9UQ88 SNORD116-24-201ENST00000384549 92 ntBASIC-0.75□□□□□ -2.53
CDK11AQ9UQ88 SNORD78.1-201ENST00000390866 65 ntBASIC-0.75□□□□□ -2.53
CDK11AQ9UQ88 MIR1255A-201ENST00000408338 113 ntBASIC-0.75□□□□□ -2.53
CDK11AQ9UQ88 RPL35AP4-201ENST00000412007 102 ntBASIC-0.75□□□□□ -2.53
CDK11AQ9UQ88 RNU6-598P-201ENST00000364017 105 ntBASIC-0.76□□□□□ -2.53
CDK11AQ9UQ88 RNU6-668P-201ENST00000364180 107 ntBASIC-0.76□□□□□ -2.53
CDK11AQ9UQ88 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.76□□□□□ -2.53
CDK11AQ9UQ88 SNORD115-31-201ENST00000365318 82 ntBASIC-0.76□□□□□ -2.53
CDK11AQ9UQ88 MIR3134-201ENST00000579433 74 ntBASIC-0.76□□□□□ -2.53
CDK11AQ9UQ88 U2.18-201ENST00000622185 84 ntBASIC-0.76□□□□□ -2.53
CDK11AQ9UQ88 RNU6-24P-201ENST00000384440 107 ntBASIC-0.77□□□□□ -2.53
CDK11AQ9UQ88 RNU6-411P-201ENST00000384451 107 ntBASIC-0.77□□□□□ -2.53
CDK11AQ9UQ88 RNU6-279P-201ENST00000391297 101 ntBASIC-0.77□□□□□ -2.53
CDK11AQ9UQ88 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.77□□□□□ -2.53
CDK11AQ9UQ88 RNU6-698P-201ENST00000363523 107 ntBASIC-0.78□□□□□ -2.53
CDK11AQ9UQ88 RNU6-34P-201ENST00000364874 107 ntBASIC-0.78□□□□□ -2.53
CDK11AQ9UQ88 RNU6-895P-201ENST00000384125 103 ntBASIC-0.78□□□□□ -2.53
CDK11AQ9UQ88 SNORA41B-201ENST00000384785 128 ntBASIC-0.78□□□□□ -2.53
CDK11AQ9UQ88 SNORD113-2-201ENST00000391082 72 ntBASIC-0.78□□□□□ -2.53
CDK11AQ9UQ88 MIR6818-201ENST00000621576 65 ntBASIC-0.78□□□□□ -2.53
CDK11AQ9UQ88 MIR520D-201ENST00000385002 87 ntBASIC-0.79□□□□□ -2.54
CDK11AQ9UQ88 MIR507-201ENST00000385234 94 ntBASIC-0.79□□□□□ -2.54
CDK11AQ9UQ88 MIR527-201ENST00000385244 85 ntBASIC-0.79□□□□□ -2.54
CDK11AQ9UQ88 AL353691.2-201ENST00000443795 59 ntBASIC-0.79□□□□□ -2.54
CDK11AQ9UQ88 RNU6-857P-201ENST00000515893 110 ntBASIC-0.79□□□□□ -2.54
CDK11AQ9UQ88 snoU83B.1-201ENST00000517136 88 ntBASIC-0.79□□□□□ -2.54
CDK11AQ9UQ88 MIR5683-201ENST00000636514 76 ntBASIC-0.79□□□□□ -2.54
CDK11AQ9UQ88 MIR8485-201ENST00000401372 91 ntBASIC-0.8□□□□□ -2.54
CDK11AQ9UQ88 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.8□□□□□ -2.54
CDK11AQ9UQ88 SNORD57-201ENST00000448188 72 ntBASIC-0.81□□□□□ -2.54
CDK11AQ9UQ88 SCARNA17-201ENST00000516183 144 ntBASIC-0.81□□□□□ -2.54
CDK11AQ9UQ88 MIR378F-201ENST00000578143 78 ntBASIC-0.81□□□□□ -2.54
CDK11AQ9UQ88 RNA5SP215-201ENST00000363440 122 ntBASIC-0.82□□□□□ -2.54
CDK11AQ9UQ88 MT-TQ-201ENST00000387372 72 ntBASIC-0.82□□□□□ -2.54
CDK11AQ9UQ88 RNU6-696P-201ENST00000390834 107 ntBASIC-0.82□□□□□ -2.54
CDK11AQ9UQ88 RNU4-63P-201ENST00000411313 118 ntBASIC-0.82□□□□□ -2.54
CDK11AQ9UQ88 AC090616.4-201ENST00000448026 115 ntBASIC-0.82□□□□□ -2.54
CDK11AQ9UQ88 RNU6-687P-201ENST00000516443 89 ntBASIC-0.82□□□□□ -2.54
CDK11AQ9UQ88 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.83□□□□□ -2.54
CDK11AQ9UQ88 RNU6-630P-201ENST00000391258 106 ntBASIC-0.83□□□□□ -2.54
CDK11AQ9UQ88 MIR548Q-201ENST00000408404 100 ntBASIC-0.83□□□□□ -2.54
CDK11AQ9UQ88 RNU6-608P-201ENST00000383927 104 ntBASIC-0.84□□□□□ -2.54
CDK11AQ9UQ88 MIR29B1-201ENST00000385015 81 ntBASIC-0.84□□□□□ -2.54
CDK11AQ9UQ88 SNORD1B-201ENST00000363091 84 ntBASIC-0.85□□□□□ -2.55
CDK11AQ9UQ88 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.85□□□□□ -2.55
CDK11AQ9UQ88 RNY1P9-201ENST00000532431 109 ntBASIC-0.85□□□□□ -2.55
CDK11AQ9UQ88 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.85□□□□□ -2.55
CDK11AQ9UQ88 MIR6874-201ENST00000635894 71 ntBASIC-0.85□□□□□ -2.55
CDK11AQ9UQ88 SNORD116-16-201ENST00000384533 92 ntBASIC-0.86□□□□□ -2.55
CDK11AQ9UQ88 RNU6-258P-201ENST00000390884 101 ntBASIC-0.86□□□□□ -2.55
CDK11AQ9UQ88 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.86□□□□□ -2.55
CDK11AQ9UQ88 AC091912.2-201ENST00000624798 167 ntBASIC-0.86□□□□□ -2.55
CDK11AQ9UQ88 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.87□□□□□ -2.55
CDK11AQ9UQ88 MIR889-201ENST00000401280 79 ntBASIC-0.87□□□□□ -2.55
CDK11AQ9UQ88 RNU6-523P-201ENST00000516304 54 ntBASIC-0.87□□□□□ -2.55
CDK11AQ9UQ88 SNORA72.7-201ENST00000516349 94 ntBASIC-0.87□□□□□ -2.55
CDK11AQ9UQ88 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.87□□□□□ -2.55
CDK11AQ9UQ88 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
CDK11AQ9UQ88 MIR4490-201ENST00000582647 84 ntBASIC-0.89□□□□□ -2.55
CDK11AQ9UQ88 MIR3170-201ENST00000582699 77 ntBASIC-0.89□□□□□ -2.55
CDK11AQ9UQ88 RNU6-540P-201ENST00000384622 101 ntBASIC-0.9□□□□□ -2.55
CDK11AQ9UQ88 MIR579-201ENST00000385221 98 ntBASIC-0.9□□□□□ -2.55
CDK11AQ9UQ88 RNU6-164P-201ENST00000364604 103 ntBASIC-0.91□□□□□ -2.56
CDK11AQ9UQ88 RNU6-30P-201ENST00000384561 107 ntBASIC-0.91□□□□□ -2.56
CDK11AQ9UQ88 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.91□□□□□ -2.56
CDK11AQ9UQ88 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.91□□□□□ -2.56
CDK11AQ9UQ88 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.92□□□□□ -2.56
CDK11AQ9UQ88 RNU7-151P-201ENST00000516930 53 ntBASIC-0.92□□□□□ -2.56
CDK11AQ9UQ88 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.92□□□□□ -2.56
CDK11AQ9UQ88 AL627230.5-201ENST00000619807 58 ntBASIC-0.92□□□□□ -2.56
CDK11AQ9UQ88 RNU6-974P-201ENST00000384099 108 ntBASIC-0.93□□□□□ -2.56
CDK11AQ9UQ88 RNU6-576P-201ENST00000390854 102 ntBASIC-0.93□□□□□ -2.56
CDK11AQ9UQ88 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.93□□□□□ -2.56
CDK11AQ9UQ88 MIR4306-201ENST00000583390 91 ntBASIC-0.93□□□□□ -2.56
CDK11AQ9UQ88 RNA5SP225-201ENST00000410874 135 ntBASIC-0.94□□□□□ -2.56
CDK11AQ9UQ88 RNU6-172P-201ENST00000411000 93 ntBASIC-0.94□□□□□ -2.56
CDK11AQ9UQ88 MIR548AX-201ENST00000580117 73 ntBASIC-0.94□□□□□ -2.56
CDK11AQ9UQ88 MIR7978-201ENST00000636158 59 ntBASIC-0.94□□□□□ -2.56
CDK11AQ9UQ88 RNU6-563P-201ENST00000364872 108 ntBASIC-0.95□□□□□ -2.56
CDK11AQ9UQ88 MIR548AA1-201ENST00000384971 97 ntBASIC-0.95□□□□□ -2.56
CDK11AQ9UQ88 RNU6-634P-201ENST00000459134 106 ntBASIC-0.95□□□□□ -2.56
CDK11AQ9UQ88 RNA5SP67-201ENST00000516422 131 ntBASIC-0.95□□□□□ -2.56
CDK11AQ9UQ88 MIR429-201ENST00000362106 83 ntBASIC-0.96□□□□□ -2.56
CDK11AQ9UQ88 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.96□□□□□ -2.56
CDK11AQ9UQ88 RNU6-871P-201ENST00000516122 100 ntBASIC-0.96□□□□□ -2.56
CDK11AQ9UQ88 MIR4324-201ENST00000584846 72 ntBASIC-0.96□□□□□ -2.56
CDK11AQ9UQ88 SNORD60.1-201ENST00000362451 73 ntBASIC-0.97□□□□□ -2.56
CDK11AQ9UQ88 MIR6502-201ENST00000617296 76 ntBASIC-0.97□□□□□ -2.56
CDK11AQ9UQ88 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.98□□□□□ -2.57
CDK11AQ9UQ88 RNU6-92P-201ENST00000605893 104 ntBASIC-0.98□□□□□ -2.57
CDK11AQ9UQ88 RNU6-79P-201ENST00000362511 107 ntBASIC-0.99□□□□□ -2.57
CDK11AQ9UQ88 RNU6-669P-201ENST00000365575 107 ntBASIC-0.99□□□□□ -2.57
CDK11AQ9UQ88 MIR125B1-201ENST00000385236 88 ntBASIC-0.99□□□□□ -2.57
CDK11AQ9UQ88 RNU6-663P-201ENST00000391105 106 ntBASIC-0.99□□□□□ -2.57
CDK11AQ9UQ88 RNU6-542P-201ENST00000516405 103 ntBASIC-0.99□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms