Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 MIR124-2-201ENST00000385081 109 ntBASIC-0.56□□□□□ -2.5
DDX41Q9UJV9 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.57□□□□□ -2.5
DDX41Q9UJV9 SNORD114-14-201ENST00000362723 75 ntBASIC-0.58□□□□□ -2.5
DDX41Q9UJV9 AC005520.4-201ENST00000604337 90 ntBASIC-0.58□□□□□ -2.5
DDX41Q9UJV9 RNU6-800P-201ENST00000384473 103 ntBASIC-0.59□□□□□ -2.5
DDX41Q9UJV9 SNORA3B-201ENST00000391305 131 ntBASIC-0.59□□□□□ -2.5
DDX41Q9UJV9 AC021146.6-201ENST00000514659 117 ntBASIC-0.6□□□□□ -2.51
DDX41Q9UJV9 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.6□□□□□ -2.51
DDX41Q9UJV9 MIR409-201ENST00000362237 79 ntBASIC-0.61□□□□□ -2.51
DDX41Q9UJV9 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.61□□□□□ -2.51
DDX41Q9UJV9 SNORD18.2-201ENST00000459604 70 ntBASIC-0.61□□□□□ -2.51
DDX41Q9UJV9 AC103706.3-201ENST00000636297 85 ntBASIC-0.61□□□□□ -2.51
DDX41Q9UJV9 SNORD22.1-201ENST00000516331 125 ntBASIC-0.62□□□□□ -2.51
DDX41Q9UJV9 MIR548AX-201ENST00000580117 73 ntBASIC-0.62□□□□□ -2.51
DDX41Q9UJV9 RNU6-92P-201ENST00000605893 104 ntBASIC-0.62□□□□□ -2.51
DDX41Q9UJV9 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.63□□□□□ -2.51
DDX41Q9UJV9 RNA5SP67-201ENST00000516422 131 ntBASIC-0.63□□□□□ -2.51
DDX41Q9UJV9 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.63□□□□□ -2.51
DDX41Q9UJV9 MIR3179-1-201ENST00000578940 84 ntBASIC-0.63□□□□□ -2.51
DDX41Q9UJV9 MIR3179-2-201ENST00000579107 84 ntBASIC-0.63□□□□□ -2.51
DDX41Q9UJV9 MIR3179-3-201ENST00000579566 84 ntBASIC-0.63□□□□□ -2.51
DDX41Q9UJV9 MIR3179-4-201ENST00000617599 84 ntBASIC-0.63□□□□□ -2.51
DDX41Q9UJV9 RNA5SP331-201ENST00000364986 107 ntBASIC-0.64□□□□□ -2.51
DDX41Q9UJV9 RNU6-458P-201ENST00000384179 107 ntBASIC-0.65□□□□□ -2.51
DDX41Q9UJV9 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.65□□□□□ -2.51
DDX41Q9UJV9 MIR548AG1-201ENST00000579932 66 ntBASIC-0.65□□□□□ -2.51
DDX41Q9UJV9 U6.58-201ENST00000613107 107 ntBASIC-0.65□□□□□ -2.51
DDX41Q9UJV9 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.66□□□□□ -2.52
DDX41Q9UJV9 MIR4511-201ENST00000582784 87 ntBASIC-0.66□□□□□ -2.52
DDX41Q9UJV9 SNORD75.1-201ENST00000408373 60 ntBASIC-0.67□□□□□ -2.52
DDX41Q9UJV9 RNU6-721P-201ENST00000410155 105 ntBASIC-0.67□□□□□ -2.52
DDX41Q9UJV9 SNORD116-16-201ENST00000384533 92 ntBASIC-0.69□□□□□ -2.52
DDX41Q9UJV9 MT-TQ-201ENST00000387372 72 ntBASIC-0.69□□□□□ -2.52
DDX41Q9UJV9 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.7□□□□□ -2.52
DDX41Q9UJV9 RNU4-63P-201ENST00000411313 118 ntBASIC-0.7□□□□□ -2.52
DDX41Q9UJV9 RNU6-246P-201ENST00000384702 107 ntBASIC-0.71□□□□□ -2.52
DDX41Q9UJV9 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.72□□□□□ -2.52
DDX41Q9UJV9 AP000533.3-201ENST00000447704 118 ntBASIC-0.72□□□□□ -2.52
DDX41Q9UJV9 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.73□□□□□ -2.53
DDX41Q9UJV9 SNORA25.5-201ENST00000363782 126 ntBASIC-0.73□□□□□ -2.53
DDX41Q9UJV9 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.73□□□□□ -2.53
DDX41Q9UJV9 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.74□□□□□ -2.53
DDX41Q9UJV9 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.75□□□□□ -2.53
DDX41Q9UJV9 SNORA41B-201ENST00000384785 128 ntBASIC-0.75□□□□□ -2.53
DDX41Q9UJV9 U7.5-201ENST00000517224 61 ntBASIC-0.75□□□□□ -2.53
DDX41Q9UJV9 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.77□□□□□ -2.53
DDX41Q9UJV9 RNA5SP266-201ENST00000410273 108 ntBASIC-0.77□□□□□ -2.53
DDX41Q9UJV9 RNU7-88P-201ENST00000458752 63 ntBASIC-0.77□□□□□ -2.53
DDX41Q9UJV9 RNU6-590P-201ENST00000365039 107 ntBASIC-0.78□□□□□ -2.53
DDX41Q9UJV9 RNU6-471P-201ENST00000383944 106 ntBASIC-0.78□□□□□ -2.53
DDX41Q9UJV9 RNU6-696P-201ENST00000390834 107 ntBASIC-0.78□□□□□ -2.53
DDX41Q9UJV9 SNORD60.1-201ENST00000362451 73 ntBASIC-0.79□□□□□ -2.54
DDX41Q9UJV9 SNORD114-25-201ENST00000363742 72 ntBASIC-0.79□□□□□ -2.54
DDX41Q9UJV9 AL500527.2-201ENST00000454105 95 ntBASIC-0.79□□□□□ -2.54
DDX41Q9UJV9 RNU6-940P-201ENST00000363433 104 ntBASIC-0.8□□□□□ -2.54
DDX41Q9UJV9 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.8□□□□□ -2.54
DDX41Q9UJV9 MIR196A1-201ENST00000388006 70 ntBASIC-0.8□□□□□ -2.54
DDX41Q9UJV9 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.8□□□□□ -2.54
DDX41Q9UJV9 MIR3681-201ENST00000580089 72 ntBASIC-0.81□□□□□ -2.54
DDX41Q9UJV9 RNA5SP192-201ENST00000364404 120 ntBASIC-0.82□□□□□ -2.54
DDX41Q9UJV9 RNU6-431P-201ENST00000383874 107 ntBASIC-0.82□□□□□ -2.54
DDX41Q9UJV9 RNU6-122P-201ENST00000516818 107 ntBASIC-0.82□□□□□ -2.54
DDX41Q9UJV9 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.82□□□□□ -2.54
DDX41Q9UJV9 MIR147A-201ENST00000385079 72 ntBASIC-0.84□□□□□ -2.54
DDX41Q9UJV9 RNU6-732P-201ENST00000516033 103 ntBASIC-0.84□□□□□ -2.54
DDX41Q9UJV9 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.84□□□□□ -2.54
DDX41Q9UJV9 SNORD114-17-201ENST00000364699 75 ntBASIC-0.85□□□□□ -2.55
DDX41Q9UJV9 SNORD64-201ENST00000386683 67 ntBASIC-0.85□□□□□ -2.55
DDX41Q9UJV9 SNORA26.4-201ENST00000391188 123 ntBASIC-0.86□□□□□ -2.55
DDX41Q9UJV9 SNORD57-201ENST00000448188 72 ntBASIC-0.86□□□□□ -2.55
DDX41Q9UJV9 AC125388.1-201ENST00000459631 156 ntBASIC-0.86□□□□□ -2.55
DDX41Q9UJV9 SNORD63.1-201ENST00000516178 80 ntBASIC-0.86□□□□□ -2.55
DDX41Q9UJV9 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.86□□□□□ -2.55
DDX41Q9UJV9 SNORD115-33-201ENST00000363723 82 ntBASIC-0.87□□□□□ -2.55
DDX41Q9UJV9 RNU6-598P-201ENST00000364017 105 ntBASIC-0.87□□□□□ -2.55
DDX41Q9UJV9 SNORD83B-201ENST00000386745 93 ntBASIC-0.88□□□□□ -2.55
DDX41Q9UJV9 RNY1P9-201ENST00000532431 109 ntBASIC-0.88□□□□□ -2.55
DDX41Q9UJV9 MIR382-201ENST00000637119 76 ntBASIC-0.88□□□□□ -2.55
DDX41Q9UJV9 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.89□□□□□ -2.55
DDX41Q9UJV9 AC110620.1-201ENST00000416042 228 ntBASIC-0.89□□□□□ -2.55
DDX41Q9UJV9 MIR4499-201ENST00000584834 69 ntBASIC-0.89□□□□□ -2.55
DDX41Q9UJV9 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.9□□□□□ -2.55
DDX41Q9UJV9 SNORD1B-201ENST00000363091 84 ntBASIC-0.91□□□□□ -2.56
DDX41Q9UJV9 uc_338.19-201ENST00000616808 99 ntBASIC-0.91□□□□□ -2.56
DDX41Q9UJV9 MIR548AA1-201ENST00000384971 97 ntBASIC-0.92□□□□□ -2.56
DDX41Q9UJV9 AL353691.2-201ENST00000443795 59 ntBASIC-0.92□□□□□ -2.56
DDX41Q9UJV9 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.93□□□□□ -2.56
DDX41Q9UJV9 MIR548Q-201ENST00000408404 100 ntBASIC-0.94□□□□□ -2.56
DDX41Q9UJV9 MIR466-201ENST00000580653 84 ntBASIC-0.94□□□□□ -2.56
DDX41Q9UJV9 U2.18-201ENST00000622185 84 ntBASIC-0.94□□□□□ -2.56
DDX41Q9UJV9 RNU6-669P-201ENST00000365575 107 ntBASIC-0.95□□□□□ -2.56
DDX41Q9UJV9 RNU6-995P-201ENST00000391244 107 ntBASIC-0.95□□□□□ -2.56
DDX41Q9UJV9 SCARNA17-201ENST00000516183 144 ntBASIC-0.95□□□□□ -2.56
DDX41Q9UJV9 RNU6-172P-201ENST00000411000 93 ntBASIC-0.96□□□□□ -2.56
DDX41Q9UJV9 AC139453.2-201ENST00000487255 133 ntBASIC-0.96□□□□□ -2.56
DDX41Q9UJV9 RNU7-119P-201ENST00000459279 63 ntBASIC-0.97□□□□□ -2.56
DDX41Q9UJV9 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.98□□□□□ -2.57
DDX41Q9UJV9 MIR7110-201ENST00000612638 86 ntBASIC-0.98□□□□□ -2.57
DDX41Q9UJV9 MIR3938-201ENST00000582157 103 ntBASIC-0.99□□□□□ -2.57
DDX41Q9UJV9 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 219.6 ms