Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.33□□□□□ -2.46
VSX1Q9NZR4 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.33□□□□□ -2.46
VSX1Q9NZR4 MIR4464-201ENST00000580818 92 ntBASIC-0.33□□□□□ -2.46
VSX1Q9NZR4 MIR5704-201ENST00000584029 77 ntBASIC-0.33□□□□□ -2.46
VSX1Q9NZR4 SNORA25.5-201ENST00000363782 126 ntBASIC-0.34□□□□□ -2.46
VSX1Q9NZR4 SNORD14C-201ENST00000365382 88 ntBASIC-0.34□□□□□ -2.46
VSX1Q9NZR4 MIR6888-201ENST00000621977 67 ntBASIC-0.34□□□□□ -2.46
VSX1Q9NZR4 SNORD114-11-201ENST00000363738 75 ntBASIC-0.35□□□□□ -2.47
VSX1Q9NZR4 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.35□□□□□ -2.47
VSX1Q9NZR4 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.36□□□□□ -2.47
VSX1Q9NZR4 SNORD116-16-201ENST00000384533 92 ntBASIC-0.36□□□□□ -2.47
VSX1Q9NZR4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
VSX1Q9NZR4 RNU6-284P-201ENST00000411105 106 ntBASIC-0.36□□□□□ -2.47
VSX1Q9NZR4 HAR1A.1-201ENST00000459583 118 ntBASIC-0.36□□□□□ -2.47
VSX1Q9NZR4 RNU6-940P-201ENST00000363433 104 ntBASIC-0.37□□□□□ -2.47
VSX1Q9NZR4 SNORD38.3-201ENST00000516599 73 ntBASIC-0.37□□□□□ -2.47
VSX1Q9NZR4 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.37□□□□□ -2.47
VSX1Q9NZR4 RNU6-246P-201ENST00000384702 107 ntBASIC-0.38□□□□□ -2.47
VSX1Q9NZR4 AC021146.6-201ENST00000514659 117 ntBASIC-0.38□□□□□ -2.47
VSX1Q9NZR4 RNY1P9-201ENST00000532431 109 ntBASIC-0.38□□□□□ -2.47
VSX1Q9NZR4 MIR4324-201ENST00000584846 72 ntBASIC-0.38□□□□□ -2.47
VSX1Q9NZR4 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.39□□□□□ -2.47
VSX1Q9NZR4 RNU6-669P-201ENST00000365575 107 ntBASIC-0.39□□□□□ -2.47
VSX1Q9NZR4 RNU6-458P-201ENST00000384179 107 ntBASIC-0.39□□□□□ -2.47
VSX1Q9NZR4 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.39□□□□□ -2.47
VSX1Q9NZR4 AC125388.1-201ENST00000459631 156 ntBASIC-0.39□□□□□ -2.47
VSX1Q9NZR4 AC139453.2-201ENST00000487255 133 ntBASIC-0.39□□□□□ -2.47
VSX1Q9NZR4 RNA5SP461-201ENST00000516451 104 ntBASIC-0.39□□□□□ -2.47
VSX1Q9NZR4 U6.58-201ENST00000613107 107 ntBASIC-0.39□□□□□ -2.47
VSX1Q9NZR4 MIR8068-201ENST00000618032 68 ntBASIC-0.39□□□□□ -2.47
VSX1Q9NZR4 SNORD95.1-201ENST00000364099 68 ntBASIC-0.4□□□□□ -2.47
VSX1Q9NZR4 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.4□□□□□ -2.47
VSX1Q9NZR4 SCARNA17-201ENST00000516183 144 ntBASIC-0.4□□□□□ -2.47
VSX1Q9NZR4 MIR124-2-201ENST00000385081 109 ntBASIC-0.41□□□□□ -2.48
VSX1Q9NZR4 AC110620.1-201ENST00000416042 228 ntBASIC-0.41□□□□□ -2.48
VSX1Q9NZR4 RNU6-122P-201ENST00000516818 107 ntBASIC-0.41□□□□□ -2.48
VSX1Q9NZR4 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.42□□□□□ -2.48
VSX1Q9NZR4 MIR196A1-201ENST00000388006 70 ntBASIC-0.42□□□□□ -2.48
VSX1Q9NZR4 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.42□□□□□ -2.48
VSX1Q9NZR4 SNORD18.2-201ENST00000459604 70 ntBASIC-0.42□□□□□ -2.48
VSX1Q9NZR4 MIR6738-201ENST00000619620 64 ntBASIC-0.42□□□□□ -2.48
VSX1Q9NZR4 SNORD60.1-201ENST00000362451 73 ntBASIC-0.43□□□□□ -2.48
VSX1Q9NZR4 RNU6-10P-201ENST00000384036 107 ntBASIC-0.43□□□□□ -2.48
VSX1Q9NZR4 MT-TQ-201ENST00000387372 72 ntBASIC-0.43□□□□□ -2.48
VSX1Q9NZR4 SNORA41B-201ENST00000384785 128 ntBASIC-0.44□□□□□ -2.48
VSX1Q9NZR4 SNORD22.1-201ENST00000516331 125 ntBASIC-0.44□□□□□ -2.48
VSX1Q9NZR4 RNA5SP476-201ENST00000516613 103 ntBASIC-0.44□□□□□ -2.48
VSX1Q9NZR4 RNA5SP169-201ENST00000517268 117 ntBASIC-0.44□□□□□ -2.48
VSX1Q9NZR4 MIR3179-1-201ENST00000578940 84 ntBASIC-0.44□□□□□ -2.48
VSX1Q9NZR4 MIR3179-2-201ENST00000579107 84 ntBASIC-0.44□□□□□ -2.48
VSX1Q9NZR4 MIR3179-3-201ENST00000579566 84 ntBASIC-0.44□□□□□ -2.48
VSX1Q9NZR4 MIR548AG1-201ENST00000579932 66 ntBASIC-0.44□□□□□ -2.48
VSX1Q9NZR4 MIR3179-4-201ENST00000617599 84 ntBASIC-0.44□□□□□ -2.48
VSX1Q9NZR4 SNORD114-14-201ENST00000362723 75 ntBASIC-0.45□□□□□ -2.48
VSX1Q9NZR4 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.45□□□□□ -2.48
VSX1Q9NZR4 RNA5SP266-201ENST00000410273 108 ntBASIC-0.45□□□□□ -2.48
VSX1Q9NZR4 RNA5SP192-201ENST00000364404 120 ntBASIC-0.46□□□□□ -2.48
VSX1Q9NZR4 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.46□□□□□ -2.48
VSX1Q9NZR4 RNU6-696P-201ENST00000390834 107 ntBASIC-0.46□□□□□ -2.48
VSX1Q9NZR4 MIR3115-201ENST00000577915 68 ntBASIC-0.46□□□□□ -2.48
VSX1Q9NZR4 MIR548AX-201ENST00000580117 73 ntBASIC-0.46□□□□□ -2.48
VSX1Q9NZR4 MIR587-201ENST00000384845 96 ntBASIC-0.47□□□□□ -2.48
VSX1Q9NZR4 RNU6-788P-201ENST00000390967 104 ntBASIC-0.47□□□□□ -2.48
VSX1Q9NZR4 AL500527.2-201ENST00000454105 95 ntBASIC-0.47□□□□□ -2.48
VSX1Q9NZR4 MIR4320-201ENST00000636981 65 ntBASIC-0.47□□□□□ -2.48
VSX1Q9NZR4 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.48□□□□□ -2.49
VSX1Q9NZR4 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.48□□□□□ -2.49
VSX1Q9NZR4 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.48□□□□□ -2.49
VSX1Q9NZR4 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.49□□□□□ -2.49
VSX1Q9NZR4 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
VSX1Q9NZR4 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.49□□□□□ -2.49
VSX1Q9NZR4 U7.5-201ENST00000517224 61 ntBASIC-0.49□□□□□ -2.49
VSX1Q9NZR4 MIR409-201ENST00000362237 79 ntBASIC-0.5□□□□□ -2.49
VSX1Q9NZR4 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
VSX1Q9NZR4 RNU7-119P-201ENST00000459279 63 ntBASIC-0.5□□□□□ -2.49
VSX1Q9NZR4 SNORD115-33-201ENST00000363723 82 ntBASIC-0.51□□□□□ -2.49
VSX1Q9NZR4 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.51□□□□□ -2.49
VSX1Q9NZR4 MIR378F-201ENST00000578143 78 ntBASIC-0.51□□□□□ -2.49
VSX1Q9NZR4 SNORA3B-201ENST00000391305 131 ntBASIC-0.52□□□□□ -2.49
VSX1Q9NZR4 AP000533.3-201ENST00000447704 118 ntBASIC-0.52□□□□□ -2.49
VSX1Q9NZR4 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.52□□□□□ -2.49
VSX1Q9NZR4 MIR466-201ENST00000580653 84 ntBASIC-0.52□□□□□ -2.49
VSX1Q9NZR4 MIR3938-201ENST00000582157 103 ntBASIC-0.52□□□□□ -2.49
VSX1Q9NZR4 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.53□□□□□ -2.49
VSX1Q9NZR4 MIR548AA1-201ENST00000384971 97 ntBASIC-0.53□□□□□ -2.49
VSX1Q9NZR4 SNORD83B-201ENST00000386745 93 ntBASIC-0.53□□□□□ -2.49
VSX1Q9NZR4 SNX3P1X-201ENST00000414887 175 ntBASIC-0.53□□□□□ -2.49
VSX1Q9NZR4 RNU6-732P-201ENST00000516033 103 ntBASIC-0.53□□□□□ -2.49
VSX1Q9NZR4 SNORD63.1-201ENST00000516178 80 ntBASIC-0.53□□□□□ -2.49
VSX1Q9NZR4 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.53□□□□□ -2.49
VSX1Q9NZR4 AL627230.5-201ENST00000619807 58 ntBASIC-0.53□□□□□ -2.49
VSX1Q9NZR4 RNU6-520P-201ENST00000384717 104 ntBASIC-0.54□□□□□ -2.5
VSX1Q9NZR4 SNORA26.4-201ENST00000391188 123 ntBASIC-0.54□□□□□ -2.5
VSX1Q9NZR4 MIR4499-201ENST00000584834 69 ntBASIC-0.54□□□□□ -2.5
VSX1Q9NZR4 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.55□□□□□ -2.5
VSX1Q9NZR4 RNU6-598P-201ENST00000364017 105 ntBASIC-0.55□□□□□ -2.5
VSX1Q9NZR4 U4.2-201ENST00000618561 85 ntBASIC-0.55□□□□□ -2.5
VSX1Q9NZR4 MIR1468-201ENST00000410600 86 ntBASIC-0.56□□□□□ -2.5
VSX1Q9NZR4 RNU7-88P-201ENST00000458752 63 ntBASIC-0.56□□□□□ -2.5
VSX1Q9NZR4 MIR7110-201ENST00000612638 86 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms