Protein–RNA interactions for Protein: Q9NY35

CLDND1, Claudin domain-containing protein 1, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1Q9NY35 RNA5SP66-201ENST00000517178 101 ntBASIC-0.17□□□□□ -2.44
CLDND1Q9NY35 U6.58-201ENST00000613107 107 ntBASIC-0.17□□□□□ -2.44
CLDND1Q9NY35 MIR429-201ENST00000362106 83 ntBASIC-0.18□□□□□ -2.44
CLDND1Q9NY35 RNU6-246P-201ENST00000384702 107 ntBASIC-0.18□□□□□ -2.44
CLDND1Q9NY35 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.19□□□□□ -2.44
CLDND1Q9NY35 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.19□□□□□ -2.44
CLDND1Q9NY35 SNORA32.1-201ENST00000364514 115 ntBASIC-0.19□□□□□ -2.44
CLDND1Q9NY35 MIR6851-201ENST00000617060 67 ntBASIC-0.19□□□□□ -2.44
CLDND1Q9NY35 SNORD114-28-201ENST00000363610 72 ntBASIC-0.2□□□□□ -2.44
CLDND1Q9NY35 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.2□□□□□ -2.44
CLDND1Q9NY35 MIR466-201ENST00000580653 84 ntBASIC-0.2□□□□□ -2.44
CLDND1Q9NY35 SNORD38.3-201ENST00000516599 73 ntBASIC-0.22□□□□□ -2.44
CLDND1Q9NY35 AC093726.3-201ENST00000637588 150 ntBASIC-0.22□□□□□ -2.44
CLDND1Q9NY35 RNA5SP300-201ENST00000391197 107 ntBASIC-0.23□□□□□ -2.45
CLDND1Q9NY35 RPS29P8-201ENST00000445109 171 ntBASIC-0.23□□□□□ -2.45
CLDND1Q9NY35 MIR4788-201ENST00000639104 80 ntBASIC-0.23□□□□□ -2.45
CLDND1Q9NY35 MIR124-2-201ENST00000385081 109 ntBASIC-0.24□□□□□ -2.45
CLDND1Q9NY35 RNU6-924P-201ENST00000362926 108 ntBASIC-0.25□□□□□ -2.45
CLDND1Q9NY35 RNA5SP266-201ENST00000410273 108 ntBASIC-0.25□□□□□ -2.45
CLDND1Q9NY35 RNA5SP451-201ENST00000410588 110 ntBASIC-0.26□□□□□ -2.45
CLDND1Q9NY35 SNORD114-11-201ENST00000363738 75 ntBASIC-0.27□□□□□ -2.45
CLDND1Q9NY35 MIR3938-201ENST00000582157 103 ntBASIC-0.27□□□□□ -2.45
CLDND1Q9NY35 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.28□□□□□ -2.45
CLDND1Q9NY35 U7.5-201ENST00000517224 61 ntBASIC-0.28□□□□□ -2.45
CLDND1Q9NY35 SNORD1B-201ENST00000363091 84 ntBASIC-0.29□□□□□ -2.46
CLDND1Q9NY35 SNORD74.6-201ENST00000364796 70 ntBASIC-0.29□□□□□ -2.46
CLDND1Q9NY35 RNU6-598P-201ENST00000364017 105 ntBASIC-0.3□□□□□ -2.46
CLDND1Q9NY35 MIR224-201ENST00000384889 81 ntBASIC-0.3□□□□□ -2.46
CLDND1Q9NY35 RNU7-88P-201ENST00000458752 63 ntBASIC-0.3□□□□□ -2.46
CLDND1Q9NY35 MIR518B-201ENST00000385127 83 ntBASIC-0.31□□□□□ -2.46
CLDND1Q9NY35 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.32□□□□□ -2.46
CLDND1Q9NY35 RNU6-696P-201ENST00000390834 107 ntBASIC-0.32□□□□□ -2.46
CLDND1Q9NY35 MIR8064-201ENST00000612863 90 ntBASIC-0.32□□□□□ -2.46
CLDND1Q9NY35 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.33□□□□□ -2.46
CLDND1Q9NY35 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.33□□□□□ -2.46
CLDND1Q9NY35 RNU6-231P-201ENST00000517122 103 ntBASIC-0.33□□□□□ -2.46
CLDND1Q9NY35 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.33□□□□□ -2.46
CLDND1Q9NY35 MIR204-201ENST00000385200 110 ntBASIC-0.34□□□□□ -2.46
CLDND1Q9NY35 SNORD22.1-201ENST00000516331 125 ntBASIC-0.34□□□□□ -2.46
CLDND1Q9NY35 RNA5SP169-201ENST00000517268 117 ntBASIC-0.34□□□□□ -2.46
CLDND1Q9NY35 SNORA13-201ENST00000458790 133 ntBASIC-0.35□□□□□ -2.47
CLDND1Q9NY35 U2.18-201ENST00000622185 84 ntBASIC-0.35□□□□□ -2.47
CLDND1Q9NY35 MIR633-201ENST00000384821 98 ntBASIC-0.36□□□□□ -2.47
CLDND1Q9NY35 RNU6-172P-201ENST00000411000 93 ntBASIC-0.36□□□□□ -2.47
CLDND1Q9NY35 SNORD18.2-201ENST00000459604 70 ntBASIC-0.36□□□□□ -2.47
CLDND1Q9NY35 MIR548AX-201ENST00000580117 73 ntBASIC-0.36□□□□□ -2.47
CLDND1Q9NY35 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.37□□□□□ -2.47
CLDND1Q9NY35 RNU7-119P-201ENST00000459279 63 ntBASIC-0.37□□□□□ -2.47
CLDND1Q9NY35 MIR7110-201ENST00000612638 86 ntBASIC-0.37□□□□□ -2.47
CLDND1Q9NY35 SNORD75.1-201ENST00000408373 60 ntBASIC-0.38□□□□□ -2.47
CLDND1Q9NY35 RNU6-732P-201ENST00000516033 103 ntBASIC-0.38□□□□□ -2.47
CLDND1Q9NY35 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.38□□□□□ -2.47
CLDND1Q9NY35 RNU6-499P-201ENST00000365615 107 ntBASIC-0.39□□□□□ -2.47
CLDND1Q9NY35 RNU6-520P-201ENST00000384717 104 ntBASIC-0.39□□□□□ -2.47
CLDND1Q9NY35 SNORD57-201ENST00000448188 72 ntBASIC-0.39□□□□□ -2.47
CLDND1Q9NY35 MIR3179-1-201ENST00000578940 84 ntBASIC-0.39□□□□□ -2.47
CLDND1Q9NY35 MIR3179-2-201ENST00000579107 84 ntBASIC-0.39□□□□□ -2.47
CLDND1Q9NY35 MIR3179-3-201ENST00000579566 84 ntBASIC-0.39□□□□□ -2.47
CLDND1Q9NY35 MIR3179-4-201ENST00000617599 84 ntBASIC-0.39□□□□□ -2.47
CLDND1Q9NY35 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.4□□□□□ -2.47
CLDND1Q9NY35 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.4□□□□□ -2.47
CLDND1Q9NY35 SNORD116.2-201ENST00000391251 93 ntBASIC-0.41□□□□□ -2.48
CLDND1Q9NY35 SNORD63.1-201ENST00000516178 80 ntBASIC-0.41□□□□□ -2.48
CLDND1Q9NY35 RNU6-446P-201ENST00000362827 106 ntBASIC-0.42□□□□□ -2.48
CLDND1Q9NY35 MIR548AA1-201ENST00000384971 97 ntBASIC-0.42□□□□□ -2.48
CLDND1Q9NY35 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.42□□□□□ -2.48
CLDND1Q9NY35 RNU6-829P-201ENST00000363700 112 ntBASIC-0.43□□□□□ -2.48
CLDND1Q9NY35 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.43□□□□□ -2.48
CLDND1Q9NY35 AC079150.2-201ENST00000443733 78 ntBASIC-0.43□□□□□ -2.48
CLDND1Q9NY35 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.44□□□□□ -2.48
CLDND1Q9NY35 AP000533.3-201ENST00000447704 118 ntBASIC-0.44□□□□□ -2.48
CLDND1Q9NY35 RNU6-320P-201ENST00000516511 106 ntBASIC-0.44□□□□□ -2.48
CLDND1Q9NY35 RNU6-721P-201ENST00000410155 105 ntBASIC-0.45□□□□□ -2.48
CLDND1Q9NY35 MIR1468-201ENST00000410600 86 ntBASIC-0.45□□□□□ -2.48
CLDND1Q9NY35 RNU7-151P-201ENST00000516930 53 ntBASIC-0.45□□□□□ -2.48
CLDND1Q9NY35 RNY1P9-201ENST00000532431 109 ntBASIC-0.45□□□□□ -2.48
CLDND1Q9NY35 SNORD14C-201ENST00000365382 88 ntBASIC-0.46□□□□□ -2.48
CLDND1Q9NY35 SNORD126-201ENST00000459475 77 ntBASIC-0.46□□□□□ -2.48
CLDND1Q9NY35 AC021146.6-201ENST00000514659 117 ntBASIC-0.46□□□□□ -2.48
CLDND1Q9NY35 RNU6-810P-201ENST00000364001 107 ntBASIC-0.47□□□□□ -2.48
CLDND1Q9NY35 MIR579-201ENST00000385221 98 ntBASIC-0.47□□□□□ -2.48
CLDND1Q9NY35 SNORA26.4-201ENST00000391188 123 ntBASIC-0.47□□□□□ -2.48
CLDND1Q9NY35 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.47□□□□□ -2.48
CLDND1Q9NY35 RNU4-63P-201ENST00000411313 118 ntBASIC-0.47□□□□□ -2.48
CLDND1Q9NY35 SNORA40.16-201ENST00000517238 121 ntBASIC-0.47□□□□□ -2.48
CLDND1Q9NY35 SNORA40B-201ENST00000385573 128 ntBASIC-0.48□□□□□ -2.49
CLDND1Q9NY35 SNORD19-201ENST00000391191 68 ntBASIC-0.48□□□□□ -2.49
CLDND1Q9NY35 SNX3P1X-201ENST00000414887 175 ntBASIC-0.48□□□□□ -2.49
CLDND1Q9NY35 RNA5SP275-201ENST00000363936 118 ntBASIC-0.49□□□□□ -2.49
CLDND1Q9NY35 RNU6-995P-201ENST00000391244 107 ntBASIC-0.49□□□□□ -2.49
CLDND1Q9NY35 MIR7978-201ENST00000636158 59 ntBASIC-0.49□□□□□ -2.49
CLDND1Q9NY35 SNORD114-17-201ENST00000364699 75 ntBASIC-0.5□□□□□ -2.49
CLDND1Q9NY35 MIR196A2-201ENST00000385189 110 ntBASIC-0.5□□□□□ -2.49
CLDND1Q9NY35 SNORA3B-201ENST00000391305 131 ntBASIC-0.5□□□□□ -2.49
CLDND1Q9NY35 RNU6-284P-201ENST00000411105 106 ntBASIC-0.5□□□□□ -2.49
CLDND1Q9NY35 MIR4723-201ENST00000585070 81 ntBASIC-0.5□□□□□ -2.49
CLDND1Q9NY35 SNORD115-33-201ENST00000363723 82 ntBASIC-0.51□□□□□ -2.49
CLDND1Q9NY35 RNU7-160P-201ENST00000516660 62 ntBASIC-0.51□□□□□ -2.49
CLDND1Q9NY35 SNORA32.3-201ENST00000384772 121 ntBASIC-0.52□□□□□ -2.49
CLDND1Q9NY35 SNORD114-14-201ENST00000362723 75 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms