Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 MIR664A-201ENST00000626086 82 ntBASIC-1□□□□□ -2.57
ZCCHC3Q9NUD5 MIR548BB-201ENST00000626714 66 ntBASIC-1□□□□□ -2.57
ZCCHC3Q9NUD5 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.01□□□□□ -2.57
ZCCHC3Q9NUD5 RNU6-247P-201ENST00000362636 107 ntBASIC-1.01□□□□□ -2.57
ZCCHC3Q9NUD5 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.01□□□□□ -2.57
ZCCHC3Q9NUD5 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.01□□□□□ -2.57
ZCCHC3Q9NUD5 SNORD45A-201ENST00000384512 84 ntBASIC-1.01□□□□□ -2.57
ZCCHC3Q9NUD5 MIR125B1-201ENST00000385236 88 ntBASIC-1.01□□□□□ -2.57
ZCCHC3Q9NUD5 SNORD63.2-201ENST00000516303 64 ntBASIC-1.01□□□□□ -2.57
ZCCHC3Q9NUD5 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.01□□□□□ -2.57
ZCCHC3Q9NUD5 U6.97-201ENST00000636904 101 ntBASIC-1.01□□□□□ -2.57
ZCCHC3Q9NUD5 RNA5SP215-201ENST00000363440 122 ntBASIC-1.02□□□□□ -2.57
ZCCHC3Q9NUD5 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.02□□□□□ -2.57
ZCCHC3Q9NUD5 MIR581-201ENST00000384895 96 ntBASIC-1.02□□□□□ -2.57
ZCCHC3Q9NUD5 RNU6-129P-201ENST00000391022 107 ntBASIC-1.02□□□□□ -2.57
ZCCHC3Q9NUD5 MIR1285-2-201ENST00000408311 88 ntBASIC-1.02□□□□□ -2.57
ZCCHC3Q9NUD5 snoU13.10-201ENST00000459301 103 ntBASIC-1.02□□□□□ -2.57
ZCCHC3Q9NUD5 RNU6-523P-201ENST00000516304 54 ntBASIC-1.02□□□□□ -2.57
ZCCHC3Q9NUD5 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.02□□□□□ -2.57
ZCCHC3Q9NUD5 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.02□□□□□ -2.57
ZCCHC3Q9NUD5 SNORA27.2-201ENST00000363365 126 ntBASIC-1.03□□□□□ -2.57
ZCCHC3Q9NUD5 RNU6-668P-201ENST00000364180 107 ntBASIC-1.03□□□□□ -2.57
ZCCHC3Q9NUD5 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.03□□□□□ -2.57
ZCCHC3Q9NUD5 RNU6-172P-201ENST00000411000 93 ntBASIC-1.03□□□□□ -2.57
ZCCHC3Q9NUD5 MTND4LP1-201ENST00000446263 157 ntBASIC-1.03□□□□□ -2.57
ZCCHC3Q9NUD5 RNU6-589P-201ENST00000516485 107 ntBASIC-1.03□□□□□ -2.57
ZCCHC3Q9NUD5 RNA5SP405-201ENST00000363059 114 ntBASIC-1.04□□□□□ -2.58
ZCCHC3Q9NUD5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
ZCCHC3Q9NUD5 RNY4P18-201ENST00000391107 89 ntBASIC-1.04□□□□□ -2.58
ZCCHC3Q9NUD5 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.04□□□□□ -2.58
ZCCHC3Q9NUD5 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.04□□□□□ -2.58
ZCCHC3Q9NUD5 MALAT1.1-201ENST00000618249 95 ntBASIC-1.04□□□□□ -2.58
ZCCHC3Q9NUD5 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.04□□□□□ -2.58
ZCCHC3Q9NUD5 MIR450A1-201ENST00000362262 91 ntBASIC-1.05□□□□□ -2.58
ZCCHC3Q9NUD5 SNORD116-22-201ENST00000384430 92 ntBASIC-1.05□□□□□ -2.58
ZCCHC3Q9NUD5 SNORD116-24-201ENST00000384549 92 ntBASIC-1.05□□□□□ -2.58
ZCCHC3Q9NUD5 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.05□□□□□ -2.58
ZCCHC3Q9NUD5 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.05□□□□□ -2.58
ZCCHC3Q9NUD5 AP001318.4-201ENST00000616637 121 ntBASIC-1.05□□□□□ -2.58
ZCCHC3Q9NUD5 AC006160.2-201ENST00000637708 154 ntBASIC-1.05□□□□□ -2.58
ZCCHC3Q9NUD5 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.06□□□□□ -2.58
ZCCHC3Q9NUD5 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.06□□□□□ -2.58
ZCCHC3Q9NUD5 MIR488-201ENST00000365739 83 ntBASIC-1.06□□□□□ -2.58
ZCCHC3Q9NUD5 RNU6-675P-201ENST00000384236 104 ntBASIC-1.06□□□□□ -2.58
ZCCHC3Q9NUD5 RNU6-995P-201ENST00000391244 107 ntBASIC-1.06□□□□□ -2.58
ZCCHC3Q9NUD5 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.06□□□□□ -2.58
ZCCHC3Q9NUD5 MIR8053-201ENST00000613344 75 ntBASIC-1.06□□□□□ -2.58
ZCCHC3Q9NUD5 MIR1297-201ENST00000637311 77 ntBASIC-1.06□□□□□ -2.58
ZCCHC3Q9NUD5 MIR409-201ENST00000362237 79 ntBASIC-1.07□□□□□ -2.58
ZCCHC3Q9NUD5 SNORA63.4-201ENST00000362763 126 ntBASIC-1.07□□□□□ -2.58
ZCCHC3Q9NUD5 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.07□□□□□ -2.58
ZCCHC3Q9NUD5 MIR1468-201ENST00000410600 86 ntBASIC-1.07□□□□□ -2.58
ZCCHC3Q9NUD5 AL365222.1-201ENST00000614661 98 ntBASIC-1.07□□□□□ -2.58
ZCCHC3Q9NUD5 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.08□□□□□ -2.58
ZCCHC3Q9NUD5 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.08□□□□□ -2.58
ZCCHC3Q9NUD5 MIR4441-201ENST00000582623 100 ntBASIC-1.08□□□□□ -2.58
ZCCHC3Q9NUD5 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.08□□□□□ -2.58
ZCCHC3Q9NUD5 RNU6-194P-201ENST00000363862 105 ntBASIC-1.09□□□□□ -2.58
ZCCHC3Q9NUD5 RNA5SP173-201ENST00000364857 136 ntBASIC-1.09□□□□□ -2.58
ZCCHC3Q9NUD5 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.09□□□□□ -2.58
ZCCHC3Q9NUD5 RNU6-959P-201ENST00000384671 107 ntBASIC-1.09□□□□□ -2.58
ZCCHC3Q9NUD5 RNU6-118P-201ENST00000516552 102 ntBASIC-1.09□□□□□ -2.58
ZCCHC3Q9NUD5 MIR2052-201ENST00000636055 55 ntBASIC-1.09□□□□□ -2.58
ZCCHC3Q9NUD5 MIR202-201ENST00000362219 110 ntBASIC-1.1□□□□□ -2.59
ZCCHC3Q9NUD5 SNORD18C-201ENST00000362704 69 ntBASIC-1.1□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-640P-201ENST00000363693 105 ntBASIC-1.1□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.1□□□□□ -2.59
ZCCHC3Q9NUD5 MIR3139-201ENST00000579145 76 ntBASIC-1.1□□□□□ -2.59
ZCCHC3Q9NUD5 MIR3133-201ENST00000583157 78 ntBASIC-1.1□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.1□□□□□ -2.59
ZCCHC3Q9NUD5 MIR365A-201ENST00000362260 87 ntBASIC-1.11□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-315P-201ENST00000362666 107 ntBASIC-1.11□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.11□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-755P-201ENST00000364400 103 ntBASIC-1.11□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-520P-201ENST00000384717 104 ntBASIC-1.11□□□□□ -2.59
ZCCHC3Q9NUD5 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
ZCCHC3Q9NUD5 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
ZCCHC3Q9NUD5 MIR548N-201ENST00000408742 75 ntBASIC-1.11□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.11□□□□□ -2.59
ZCCHC3Q9NUD5 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.11□□□□□ -2.59
ZCCHC3Q9NUD5 AL031737.1-201ENST00000450125 223 ntBASIC-1.11□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.11□□□□□ -2.59
ZCCHC3Q9NUD5 MIR4748-201ENST00000578076 82 ntBASIC-1.11□□□□□ -2.59
ZCCHC3Q9NUD5 MIR548AI-201ENST00000579940 88 ntBASIC-1.11□□□□□ -2.59
ZCCHC3Q9NUD5 SNORD60.1-201ENST00000362451 73 ntBASIC-1.12□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.12□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.12□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.12□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.12□□□□□ -2.59
ZCCHC3Q9NUD5 AC008267.6-201ENST00000441664 139 ntBASIC-1.12□□□□□ -2.59
ZCCHC3Q9NUD5 SNORA40.13-201ENST00000516379 120 ntBASIC-1.12□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-68P-201ENST00000516576 104 ntBASIC-1.12□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-844P-201ENST00000517175 102 ntBASIC-1.12□□□□□ -2.59
ZCCHC3Q9NUD5 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.12□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-810P-201ENST00000364001 107 ntBASIC-1.13□□□□□ -2.59
ZCCHC3Q9NUD5 RNY1P1-201ENST00000364372 112 ntBASIC-1.13□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.13□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.13□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.13□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-649P-201ENST00000384463 107 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms