Protein–RNA interactions for Protein: Q9H2Z4

NKX2-4, Homeobox protein Nkx-2.4, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4Q9H2Z4 RPS29P8-201ENST00000445109 171 ntBASIC-0.15□□□□□ -2.43
NKX2-4Q9H2Z4 RNU6-320P-201ENST00000516511 106 ntBASIC-0.15□□□□□ -2.43
NKX2-4Q9H2Z4 MIR6854-201ENST00000614935 69 ntBASIC-0.15□□□□□ -2.43
NKX2-4Q9H2Z4 SNORA25.5-201ENST00000363782 126 ntBASIC-0.16□□□□□ -2.44
NKX2-4Q9H2Z4 MIR6888-201ENST00000621977 67 ntBASIC-0.16□□□□□ -2.44
NKX2-4Q9H2Z4 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.17□□□□□ -2.44
NKX2-4Q9H2Z4 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
NKX2-4Q9H2Z4 AL500527.2-201ENST00000454105 95 ntBASIC-0.17□□□□□ -2.44
NKX2-4Q9H2Z4 MIR6851-201ENST00000617060 67 ntBASIC-0.17□□□□□ -2.44
NKX2-4Q9H2Z4 MIR4788-201ENST00000639104 80 ntBASIC-0.17□□□□□ -2.44
NKX2-4Q9H2Z4 MIR429-201ENST00000362106 83 ntBASIC-0.18□□□□□ -2.44
NKX2-4Q9H2Z4 SNORA32.3-201ENST00000384772 121 ntBASIC-0.18□□□□□ -2.44
NKX2-4Q9H2Z4 RNU6-788P-201ENST00000390967 104 ntBASIC-0.18□□□□□ -2.44
NKX2-4Q9H2Z4 RNA5SP66-201ENST00000517178 101 ntBASIC-0.18□□□□□ -2.44
NKX2-4Q9H2Z4 AL445584.3-201ENST00000617173 78 ntBASIC-0.18□□□□□ -2.44
NKX2-4Q9H2Z4 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.19□□□□□ -2.44
NKX2-4Q9H2Z4 SNORD126-201ENST00000459475 77 ntBASIC-0.19□□□□□ -2.44
NKX2-4Q9H2Z4 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.19□□□□□ -2.44
NKX2-4Q9H2Z4 RNA5SP192-201ENST00000364404 120 ntBASIC-0.2□□□□□ -2.44
NKX2-4Q9H2Z4 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.2□□□□□ -2.44
NKX2-4Q9H2Z4 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.2□□□□□ -2.44
NKX2-4Q9H2Z4 RNU6-721P-201ENST00000410155 105 ntBASIC-0.2□□□□□ -2.44
NKX2-4Q9H2Z4 RNA5SP451-201ENST00000410588 110 ntBASIC-0.2□□□□□ -2.44
NKX2-4Q9H2Z4 MIR548AZ-201ENST00000616567 95 ntBASIC-0.2□□□□□ -2.44
NKX2-4Q9H2Z4 MIR224-201ENST00000384889 81 ntBASIC-0.21□□□□□ -2.44
NKX2-4Q9H2Z4 RNU4-63P-201ENST00000411313 118 ntBASIC-0.21□□□□□ -2.44
NKX2-4Q9H2Z4 AC093726.3-201ENST00000637588 150 ntBASIC-0.21□□□□□ -2.44
NKX2-4Q9H2Z4 SNORD14C-201ENST00000365382 88 ntBASIC-0.22□□□□□ -2.44
NKX2-4Q9H2Z4 RNU6-246P-201ENST00000384702 107 ntBASIC-0.22□□□□□ -2.44
NKX2-4Q9H2Z4 RNU6-284P-201ENST00000411105 106 ntBASIC-0.22□□□□□ -2.44
NKX2-4Q9H2Z4 RNU6-940P-201ENST00000363433 104 ntBASIC-0.23□□□□□ -2.45
NKX2-4Q9H2Z4 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.23□□□□□ -2.45
NKX2-4Q9H2Z4 MIR124-2-201ENST00000385081 109 ntBASIC-0.23□□□□□ -2.45
NKX2-4Q9H2Z4 AC110620.1-201ENST00000416042 228 ntBASIC-0.23□□□□□ -2.45
NKX2-4Q9H2Z4 RNU7-134P-201ENST00000458997 64 ntBASIC-0.23□□□□□ -2.45
NKX2-4Q9H2Z4 SCARNA17-201ENST00000516183 144 ntBASIC-0.23□□□□□ -2.45
NKX2-4Q9H2Z4 SNORD22.1-201ENST00000516331 125 ntBASIC-0.23□□□□□ -2.45
NKX2-4Q9H2Z4 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.24□□□□□ -2.45
NKX2-4Q9H2Z4 RNU6-431P-201ENST00000383874 107 ntBASIC-0.24□□□□□ -2.45
NKX2-4Q9H2Z4 RNU6-458P-201ENST00000384179 107 ntBASIC-0.24□□□□□ -2.45
NKX2-4Q9H2Z4 SNORD116-16-201ENST00000384533 92 ntBASIC-0.24□□□□□ -2.45
NKX2-4Q9H2Z4 SNORA41B-201ENST00000384785 128 ntBASIC-0.24□□□□□ -2.45
NKX2-4Q9H2Z4 MIR518B-201ENST00000385127 83 ntBASIC-0.24□□□□□ -2.45
NKX2-4Q9H2Z4 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.24□□□□□ -2.45
NKX2-4Q9H2Z4 U6.58-201ENST00000613107 107 ntBASIC-0.24□□□□□ -2.45
NKX2-4Q9H2Z4 SNORD60.1-201ENST00000362451 73 ntBASIC-0.25□□□□□ -2.45
NKX2-4Q9H2Z4 SNORD74.6-201ENST00000364796 70 ntBASIC-0.25□□□□□ -2.45
NKX2-4Q9H2Z4 RNU6-122P-201ENST00000516818 107 ntBASIC-0.26□□□□□ -2.45
NKX2-4Q9H2Z4 MIR3179-1-201ENST00000578940 84 ntBASIC-0.26□□□□□ -2.45
NKX2-4Q9H2Z4 MIR3179-2-201ENST00000579107 84 ntBASIC-0.26□□□□□ -2.45
NKX2-4Q9H2Z4 MIR3179-3-201ENST00000579566 84 ntBASIC-0.26□□□□□ -2.45
NKX2-4Q9H2Z4 MIR3179-4-201ENST00000617599 84 ntBASIC-0.26□□□□□ -2.45
NKX2-4Q9H2Z4 SNORD114-14-201ENST00000362723 75 ntBASIC-0.27□□□□□ -2.45
NKX2-4Q9H2Z4 RNU6-924P-201ENST00000362926 108 ntBASIC-0.27□□□□□ -2.45
NKX2-4Q9H2Z4 MIR196A1-201ENST00000388006 70 ntBASIC-0.27□□□□□ -2.45
NKX2-4Q9H2Z4 SNORD57-201ENST00000448188 72 ntBASIC-0.27□□□□□ -2.45
NKX2-4Q9H2Z4 AP002795.1-201ENST00000534879 84 ntBASIC-0.27□□□□□ -2.45
NKX2-4Q9H2Z4 MIR548AX-201ENST00000580117 73 ntBASIC-0.27□□□□□ -2.45
NKX2-4Q9H2Z4 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.28□□□□□ -2.45
NKX2-4Q9H2Z4 MIR204-201ENST00000385200 110 ntBASIC-0.28□□□□□ -2.45
NKX2-4Q9H2Z4 SNORD19-201ENST00000391191 68 ntBASIC-0.28□□□□□ -2.45
NKX2-4Q9H2Z4 AP000533.3-201ENST00000447704 118 ntBASIC-0.28□□□□□ -2.45
NKX2-4Q9H2Z4 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.28□□□□□ -2.45
NKX2-4Q9H2Z4 SNORD114-25-201ENST00000363742 72 ntBASIC-0.29□□□□□ -2.46
NKX2-4Q9H2Z4 RNU6-669P-201ENST00000365575 107 ntBASIC-0.29□□□□□ -2.46
NKX2-4Q9H2Z4 SNORD64-201ENST00000386683 67 ntBASIC-0.29□□□□□ -2.46
NKX2-4Q9H2Z4 SNORA3B-201ENST00000391305 131 ntBASIC-0.29□□□□□ -2.46
NKX2-4Q9H2Z4 MIR8485-201ENST00000401372 91 ntBASIC-0.29□□□□□ -2.46
NKX2-4Q9H2Z4 MIR1468-201ENST00000410600 86 ntBASIC-0.29□□□□□ -2.46
NKX2-4Q9H2Z4 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.29□□□□□ -2.46
NKX2-4Q9H2Z4 SNORA13-201ENST00000458790 133 ntBASIC-0.29□□□□□ -2.46
NKX2-4Q9H2Z4 RNA5SP461-201ENST00000516451 104 ntBASIC-0.29□□□□□ -2.46
NKX2-4Q9H2Z4 U7.5-201ENST00000517224 61 ntBASIC-0.29□□□□□ -2.46
NKX2-4Q9H2Z4 MIR4324-201ENST00000584846 72 ntBASIC-0.29□□□□□ -2.46
NKX2-4Q9H2Z4 RNU6-598P-201ENST00000364017 105 ntBASIC-0.3□□□□□ -2.46
NKX2-4Q9H2Z4 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.3□□□□□ -2.46
NKX2-4Q9H2Z4 RNU7-88P-201ENST00000458752 63 ntBASIC-0.3□□□□□ -2.46
NKX2-4Q9H2Z4 SNORD18.2-201ENST00000459604 70 ntBASIC-0.3□□□□□ -2.46
NKX2-4Q9H2Z4 SNORD63.1-201ENST00000516178 80 ntBASIC-0.3□□□□□ -2.46
NKX2-4Q9H2Z4 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.3□□□□□ -2.46
NKX2-4Q9H2Z4 MIR4499-201ENST00000584834 69 ntBASIC-0.3□□□□□ -2.46
NKX2-4Q9H2Z4 SNORD114-17-201ENST00000364699 75 ntBASIC-0.31□□□□□ -2.46
NKX2-4Q9H2Z4 MIR147A-201ENST00000385079 72 ntBASIC-0.31□□□□□ -2.46
NKX2-4Q9H2Z4 MIR3115-201ENST00000577915 68 ntBASIC-0.31□□□□□ -2.46
NKX2-4Q9H2Z4 MIR466-201ENST00000580653 84 ntBASIC-0.31□□□□□ -2.46
NKX2-4Q9H2Z4 MIR382-201ENST00000637119 76 ntBASIC-0.31□□□□□ -2.46
NKX2-4Q9H2Z4 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.32□□□□□ -2.46
NKX2-4Q9H2Z4 MIR378F-201ENST00000578143 78 ntBASIC-0.32□□□□□ -2.46
NKX2-4Q9H2Z4 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.33□□□□□ -2.46
NKX2-4Q9H2Z4 SNORA26.4-201ENST00000391188 123 ntBASIC-0.33□□□□□ -2.46
NKX2-4Q9H2Z4 RNU6-732P-201ENST00000516033 103 ntBASIC-0.33□□□□□ -2.46
NKX2-4Q9H2Z4 RNY1P9-201ENST00000532431 109 ntBASIC-0.33□□□□□ -2.46
NKX2-4Q9H2Z4 SNORD115-33-201ENST00000363723 82 ntBASIC-0.34□□□□□ -2.46
NKX2-4Q9H2Z4 RNU6-226P-201ENST00000363778 107 ntBASIC-0.34□□□□□ -2.46
NKX2-4Q9H2Z4 SNX3P1X-201ENST00000414887 175 ntBASIC-0.34□□□□□ -2.46
NKX2-4Q9H2Z4 AC021146.6-201ENST00000514659 117 ntBASIC-0.34□□□□□ -2.46
NKX2-4Q9H2Z4 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.34□□□□□ -2.46
NKX2-4Q9H2Z4 MIR4723-201ENST00000585070 81 ntBASIC-0.34□□□□□ -2.46
NKX2-4Q9H2Z4 U2.18-201ENST00000622185 84 ntBASIC-0.34□□□□□ -2.46
NKX2-4Q9H2Z4 RNA5SP26-201ENST00000362406 119 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms