Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 SNORD116-10-201ENST00000363791 102 ntBASIC-2.98□□□□□ -2.89
TRIM4Q9C037 RNU6-590P-201ENST00000365039 107 ntBASIC-2.98□□□□□ -2.89
TRIM4Q9C037 RNU6-1061P-201ENST00000516530 99 ntBASIC-2.98□□□□□ -2.89
TRIM4Q9C037 MIR3171-201ENST00000584270 74 ntBASIC-2.98□□□□□ -2.89
TRIM4Q9C037 U7.2-201ENST00000607576 63 ntBASIC-2.98□□□□□ -2.89
TRIM4Q9C037 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.99□□□□□ -2.89
TRIM4Q9C037 RNA5SP173-201ENST00000364857 136 ntBASIC-2.99□□□□□ -2.89
TRIM4Q9C037 MT-TD-201ENST00000387419 68 ntBASIC-2.99□□□□□ -2.89
TRIM4Q9C037 SNORD115-45-201ENST00000391078 81 ntBASIC-2.99□□□□□ -2.89
TRIM4Q9C037 RNU6-1135P-201ENST00000411083 103 ntBASIC-2.99□□□□□ -2.89
TRIM4Q9C037 MTND4LP1-201ENST00000446263 157 ntBASIC-2.99□□□□□ -2.89
TRIM4Q9C037 RNU4-71P-201ENST00000516258 113 ntBASIC-2.99□□□□□ -2.89
TRIM4Q9C037 RNU6-755P-201ENST00000364400 103 ntBASIC-3□□□□□ -2.89
TRIM4Q9C037 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-3□□□□□ -2.89
TRIM4Q9C037 AC022559.1-201ENST00000520905 205 ntBASIC-3□□□□□ -2.89
TRIM4Q9C037 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-3□□□□□ -2.89
TRIM4Q9C037 Y_RNA.20-201ENST00000362479 113 ntBASIC-3.01□□□□□ -2.89
TRIM4Q9C037 RNA5SP215-201ENST00000363440 122 ntBASIC-3.01□□□□□ -2.89
TRIM4Q9C037 Y_RNA.138-201ENST00000363462 102 ntBASIC-3.01□□□□□ -2.89
TRIM4Q9C037 RNU6-537P-201ENST00000517277 103 ntBASIC-3.01□□□□□ -2.89
TRIM4Q9C037 SNORA81.3-201ENST00000517283 198 ntBASIC-3.01□□□□□ -2.89
TRIM4Q9C037 RNU6-810P-201ENST00000364001 107 ntBASIC-3.02□□□□□ -2.89
TRIM4Q9C037 MTND5P20-201ENST00000448677 143 ntBASIC-3.02□□□□□ -2.89
TRIM4Q9C037 MTATP8P1-201ENST00000467115 207 ntBASIC-3.02□□□□□ -2.89
TRIM4Q9C037 RNU7-160P-201ENST00000516660 62 ntBASIC-3.03□□□□□ -2.89
TRIM4Q9C037 Y_RNA.574-201ENST00000384766 95 ntBASIC-3.04□□□□□ -2.9
TRIM4Q9C037 Y_RNA.649-201ENST00000459077 103 ntBASIC-3.04□□□□□ -2.9
TRIM4Q9C037 Y_RNA.702-201ENST00000516843 96 ntBASIC-3.04□□□□□ -2.9
TRIM4Q9C037 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.05□□□□□ -2.9
TRIM4Q9C037 Y_RNA.202-201ENST00000364083 110 ntBASIC-3.06□□□□□ -2.9
TRIM4Q9C037 Y_RNA.272-201ENST00000364696 102 ntBASIC-3.07□□□□□ -2.9
TRIM4Q9C037 RNU6-129P-201ENST00000391022 107 ntBASIC-3.07□□□□□ -2.9
TRIM4Q9C037 Y_RNA.619-201ENST00000410951 90 ntBASIC-3.07□□□□□ -2.9
TRIM4Q9C037 AC020661.2-201ENST00000560114 134 ntBASIC-3.07□□□□□ -2.9
TRIM4Q9C037 AC141273.2-201ENST00000618989 130 ntBASIC-3.07□□□□□ -2.9
TRIM4Q9C037 SCARNA23-201ENST00000516060 130 ntBASIC-3.08□□□□□ -2.9
TRIM4Q9C037 AC072026.1-201ENST00000605023 201 ntBASIC-3.08□□□□□ -2.9
TRIM4Q9C037 Y_RNA.200-201ENST00000364018 102 ntBASIC-3.09□□□□□ -2.9
TRIM4Q9C037 SNORD116.2-201ENST00000391251 93 ntBASIC-3.09□□□□□ -2.9
TRIM4Q9C037 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.09□□□□□ -2.9
TRIM4Q9C037 MIR7110-201ENST00000612638 86 ntBASIC-3.09□□□□□ -2.9
TRIM4Q9C037 RNU4-40P-201ENST00000364351 143 ntBASIC-3.1□□□□□ -2.91
TRIM4Q9C037 RNU6-789P-201ENST00000517105 102 ntBASIC-3.1□□□□□ -2.91
TRIM4Q9C037 Y_RNA.240-201ENST00000364469 95 ntBASIC-3.11□□□□□ -2.91
TRIM4Q9C037 RNU6-182P-201ENST00000516970 105 ntBASIC-3.11□□□□□ -2.91
TRIM4Q9C037 RNU6-176P-201ENST00000517196 105 ntBASIC-3.11□□□□□ -2.91
TRIM4Q9C037 SNORD113.1-201ENST00000363280 73 ntBASIC-3.12□□□□□ -2.91
TRIM4Q9C037 Y_RNA.478-201ENST00000384358 107 ntBASIC-3.12□□□□□ -2.91
TRIM4Q9C037 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.13□□□□□ -2.91
TRIM4Q9C037 SNORD45A-201ENST00000384512 84 ntBASIC-3.13□□□□□ -2.91
TRIM4Q9C037 MIR519C-201ENST00000385053 87 ntBASIC-3.13□□□□□ -2.91
TRIM4Q9C037 RNU6-772P-201ENST00000516042 105 ntBASIC-3.13□□□□□ -2.91
TRIM4Q9C037 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.13□□□□□ -2.91
TRIM4Q9C037 MIR4484-201ENST00000582855 83 ntBASIC-3.13□□□□□ -2.91
TRIM4Q9C037 AL157777.2-201ENST00000258070 137 ntBASIC-3.14□□□□□ -2.91
TRIM4Q9C037 RNU6-822P-201ENST00000362707 106 ntBASIC-3.14□□□□□ -2.91
TRIM4Q9C037 RNU6-303P-201ENST00000517091 106 ntBASIC-3.14□□□□□ -2.91
TRIM4Q9C037 MIR548X2-201ENST00000579776 100 ntBASIC-3.14□□□□□ -2.91
TRIM4Q9C037 AP001318.4-201ENST00000616637 121 ntBASIC-3.14□□□□□ -2.91
TRIM4Q9C037 Y_RNA.460-201ENST00000384255 102 ntBASIC-3.15□□□□□ -2.91
TRIM4Q9C037 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.16□□□□□ -2.92
TRIM4Q9C037 SNORA63-201ENST00000363450 132 ntBASIC-3.16□□□□□ -2.92
TRIM4Q9C037 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.16□□□□□ -2.92
TRIM4Q9C037 RNU6-854P-201ENST00000364036 107 ntBASIC-3.16□□□□□ -2.92
TRIM4Q9C037 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.16□□□□□ -2.92
TRIM4Q9C037 RNU6-162P-201ENST00000516228 103 ntBASIC-3.16□□□□□ -2.92
TRIM4Q9C037 RNU6-231P-201ENST00000517122 103 ntBASIC-3.16□□□□□ -2.92
TRIM4Q9C037 RNU6-742P-201ENST00000365289 107 ntBASIC-3.17□□□□□ -2.92
TRIM4Q9C037 MIR124-1-201ENST00000385275 85 ntBASIC-3.17□□□□□ -2.92
TRIM4Q9C037 Y_RNA.680-201ENST00000516441 93 ntBASIC-3.17□□□□□ -2.92
TRIM4Q9C037 RNU6-111P-201ENST00000517179 105 ntBASIC-3.17□□□□□ -2.92
TRIM4Q9C037 SNORD45.2-201ENST00000363552 72 ntBASIC-3.18□□□□□ -2.92
TRIM4Q9C037 RNU6-574P-201ENST00000384265 107 ntBASIC-3.18□□□□□ -2.92
TRIM4Q9C037 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.18□□□□□ -2.92
TRIM4Q9C037 RNU6-904P-201ENST00000516206 101 ntBASIC-3.18□□□□□ -2.92
TRIM4Q9C037 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.19□□□□□ -2.92
TRIM4Q9C037 Y_RNA.532-201ENST00000384590 113 ntBASIC-3.19□□□□□ -2.92
TRIM4Q9C037 RNU6-665P-201ENST00000384639 107 ntBASIC-3.19□□□□□ -2.92
TRIM4Q9C037 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-3.19□□□□□ -2.92
TRIM4Q9C037 AL451105.1-201ENST00000450005 189 ntBASIC-3.19□□□□□ -2.92
TRIM4Q9C037 MIR548AH-201ENST00000637109 76 ntBASIC-3.19□□□□□ -2.92
TRIM4Q9C037 AC139453.2-201ENST00000487255 133 ntBASIC-3.2□□□□□ -2.92
TRIM4Q9C037 RNU7-61P-201ENST00000515897 61 ntBASIC-3.2□□□□□ -2.92
TRIM4Q9C037 MIR3128-201ENST00000581957 66 ntBASIC-3.2□□□□□ -2.92
TRIM4Q9C037 SNORA40B-201ENST00000385573 128 ntBASIC-3.21□□□□□ -2.92
TRIM4Q9C037 MIR548F4-201ENST00000408515 105 ntBASIC-3.21□□□□□ -2.92
TRIM4Q9C037 AC074348.1-201ENST00000426503 132 ntBASIC-3.21□□□□□ -2.92
TRIM4Q9C037 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.21□□□□□ -2.92
TRIM4Q9C037 AC062037.1-201ENST00000605302 128 ntBASIC-3.21□□□□□ -2.92
TRIM4Q9C037 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.22□□□□□ -2.92
TRIM4Q9C037 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.22□□□□□ -2.92
TRIM4Q9C037 SNORD116-18-201ENST00000383961 92 ntBASIC-3.23□□□□□ -2.93
TRIM4Q9C037 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.23□□□□□ -2.93
TRIM4Q9C037 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.23□□□□□ -2.93
TRIM4Q9C037 MIR8053-201ENST00000613344 75 ntBASIC-3.23□□□□□ -2.93
TRIM4Q9C037 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.24□□□□□ -2.93
TRIM4Q9C037 RNU6-624P-201ENST00000363411 107 ntBASIC-3.24□□□□□ -2.93
TRIM4Q9C037 Y_RNA.219-201ENST00000364232 113 ntBASIC-3.24□□□□□ -2.93
TRIM4Q9C037 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.24□□□□□ -2.93
TRIM4Q9C037 MIR664A-201ENST00000626086 82 ntBASIC-3.24□□□□□ -2.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms