Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC114801.3-201ENST00000510231 177 ntBASIC-2.99□□□□□ -2.89
COL12A1Q99715 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.99□□□□□ -2.89
COL12A1Q99715 SNORD115-46-201ENST00000390982 71 ntBASIC-2.99□□□□□ -2.89
COL12A1Q99715 Y_RNA.187-201ENST00000363918 113 ntBASIC-3□□□□□ -2.89
COL12A1Q99715 RNU6-566P-201ENST00000516790 107 ntBASIC-3□□□□□ -2.89
COL12A1Q99715 AL160413.1-201ENST00000622780 310 ntBASIC-3□□□□□ -2.89
COL12A1Q99715 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-3□□□□□ -2.89
COL12A1Q99715 Y_RNA.337-201ENST00000365312 102 ntBASIC-3.01□□□□□ -2.89
COL12A1Q99715 U6.103-201ENST00000637085 61 ntBASIC-3.01□□□□□ -2.89
COL12A1Q99715 SNORA40.4-201ENST00000390971 128 ntBASIC-3.01□□□□□ -2.89
COL12A1Q99715 Y_RNA.41-201ENST00000362646 102 ntBASIC-3.01□□□□□ -2.89
COL12A1Q99715 SNORA25.4-201ENST00000363666 124 ntBASIC-3.01□□□□□ -2.89
COL12A1Q99715 RNU6-1088P-201ENST00000516850 104 ntBASIC-3.01□□□□□ -2.89
COL12A1Q99715 RNU6-829P-201ENST00000363700 112 ntBASIC-3.02□□□□□ -2.89
COL12A1Q99715 RNU6-1289P-201ENST00000384431 106 ntBASIC-3.02□□□□□ -2.89
COL12A1Q99715 SNORD116-6-201ENST00000384711 96 ntBASIC-3.02□□□□□ -2.89
COL12A1Q99715 MTND2P23-201ENST00000422990 651 ntBASIC-3.02□□□□□ -2.89
COL12A1Q99715 MTND2P30-201ENST00000456663 382 ntBASIC-3.02□□□□□ -2.89
COL12A1Q99715 Y_RNA.615-201ENST00000410769 117 ntBASIC-3.02□□□□□ -2.89
COL12A1Q99715 RNU6-130P-201ENST00000411112 103 ntBASIC-3.02□□□□□ -2.89
COL12A1Q99715 RNY3P15-201ENST00000516297 97 ntBASIC-3.02□□□□□ -2.89
COL12A1Q99715 RNU6-687P-201ENST00000516443 89 ntBASIC-3.02□□□□□ -2.89
COL12A1Q99715 SNORD37.2-201ENST00000391075 66 ntBASIC-3.03□□□□□ -2.89
COL12A1Q99715 MIR4999-201ENST00000585029 91 ntBASIC-3.03□□□□□ -2.89
COL12A1Q99715 RNU6-497P-201ENST00000365316 104 ntBASIC-3.03□□□□□ -2.89
COL12A1Q99715 MIR548T-201ENST00000408369 74 ntBASIC-3.03□□□□□ -2.89
COL12A1Q99715 SNORD113-4-201ENST00000364802 75 ntBASIC-3.04□□□□□ -2.9
COL12A1Q99715 AC096644.2-201ENST00000429278 159 ntBASIC-3.04□□□□□ -2.9
COL12A1Q99715 Y_RNA.44-201ENST00000362676 108 ntBASIC-3.04□□□□□ -2.9
COL12A1Q99715 RPS29P30-201ENST00000600975 111 ntBASIC-3.04□□□□□ -2.9
COL12A1Q99715 SNORD81.2-201ENST00000365153 76 ntBASIC-3.04□□□□□ -2.9
COL12A1Q99715 MTND3P10-201ENST00000450967 341 ntBASIC-3.05□□□□□ -2.9
COL12A1Q99715 RNU6-1046P-201ENST00000516538 107 ntBASIC-3.05□□□□□ -2.9
COL12A1Q99715 RNU6-753P-201ENST00000363926 107 ntBASIC-3.06□□□□□ -2.9
COL12A1Q99715 AC078883.4-201ENST00000623218 367 ntBASIC-3.06□□□□□ -2.9
COL12A1Q99715 MIR548F3-201ENST00000408509 87 ntBASIC-3.06□□□□□ -2.9
COL12A1Q99715 SNORD33.1-201ENST00000516213 88 ntBASIC-3.06□□□□□ -2.9
COL12A1Q99715 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-3.06□□□□□ -2.9
COL12A1Q99715 AC044792.1-201ENST00000593294 196 ntBASIC-3.06□□□□□ -2.9
COL12A1Q99715 U7.3-201ENST00000616123 62 ntBASIC-3.06□□□□□ -2.9
COL12A1Q99715 RNU6-446P-201ENST00000362827 106 ntBASIC-3.07□□□□□ -2.9
COL12A1Q99715 Y_RNA.84-201ENST00000363011 104 ntBASIC-3.07□□□□□ -2.9
COL12A1Q99715 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.07□□□□□ -2.9
COL12A1Q99715 U2.14-201ENST00000615943 113 ntBASIC-3.07□□□□□ -2.9
COL12A1Q99715 MIR2052-201ENST00000636055 55 ntBASIC-3.07□□□□□ -2.9
COL12A1Q99715 SNORD116-22-201ENST00000384430 92 ntBASIC-3.08□□□□□ -2.9
COL12A1Q99715 Y_RNA.607-201ENST00000410597 98 ntBASIC-3.08□□□□□ -2.9
COL12A1Q99715 AC099799.1-201ENST00000439809 192 ntBASIC-3.08□□□□□ -2.9
COL12A1Q99715 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.08□□□□□ -2.9
COL12A1Q99715 Y_RNA.485-201ENST00000384395 102 ntBASIC-3.09□□□□□ -2.9
COL12A1Q99715 Y_RNA.599-201ENST00000410489 109 ntBASIC-3.09□□□□□ -2.9
COL12A1Q99715 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.09□□□□□ -2.9
COL12A1Q99715 RNU6-460P-201ENST00000391158 108 ntBASIC-3.09□□□□□ -2.9
COL12A1Q99715 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-3.09□□□□□ -2.9
COL12A1Q99715 RNU6-500P-201ENST00000362349 107 ntBASIC-3.1□□□□□ -2.91
COL12A1Q99715 RNU7-121P-201ENST00000516604 62 ntBASIC-3.1□□□□□ -2.91
COL12A1Q99715 DNAJC19P2-201ENST00000593340 302 ntBASIC-3.1□□□□□ -2.91
COL12A1Q99715 RNU6-930P-201ENST00000390938 100 ntBASIC-3.11□□□□□ -2.91
COL12A1Q99715 Y_RNA.818-201ENST00000618813 71 ntBASIC-3.11□□□□□ -2.91
COL12A1Q99715 Y_RNA.201-201ENST00000364052 96 ntBASIC-3.11□□□□□ -2.91
COL12A1Q99715 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.11□□□□□ -2.91
COL12A1Q99715 SNORA19-201ENST00000384737 128 ntBASIC-3.12□□□□□ -2.91
COL12A1Q99715 Y_RNA.93-201ENST00000363066 109 ntBASIC-3.12□□□□□ -2.91
COL12A1Q99715 RNU6-1257P-201ENST00000384625 110 ntBASIC-3.12□□□□□ -2.91
COL12A1Q99715 MIR3134-201ENST00000579433 74 ntBASIC-3.12□□□□□ -2.91
COL12A1Q99715 Y_RNA.611-201ENST00000410682 108 ntBASIC-3.13□□□□□ -2.91
COL12A1Q99715 Y_RNA.339-201ENST00000365325 102 ntBASIC-3.13□□□□□ -2.91
COL12A1Q99715 MIR1302-5-201ENST00000408164 150 ntBASIC-3.13□□□□□ -2.91
COL12A1Q99715 SNORA40.14-201ENST00000516543 86 ntBASIC-3.14□□□□□ -2.91
COL12A1Q99715 NBR2-204ENST00000587322 63 ntBASIC-3.14□□□□□ -2.91
COL12A1Q99715 Y_RNA.154-201ENST00000363624 102 ntBASIC-3.15□□□□□ -2.91
COL12A1Q99715 RNU6-463P-201ENST00000384340 107 ntBASIC-3.15□□□□□ -2.91
COL12A1Q99715 MIR4272-201ENST00000635924 64 ntBASIC-3.15□□□□□ -2.91
COL12A1Q99715 MIR548F5-201ENST00000408421 86 ntBASIC-3.16□□□□□ -2.91
COL12A1Q99715 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.16□□□□□ -2.92
COL12A1Q99715 U7.2-201ENST00000607576 63 ntBASIC-3.16□□□□□ -2.92
COL12A1Q99715 Y_RNA.292-201ENST00000364904 97 ntBASIC-3.17□□□□□ -2.92
COL12A1Q99715 AL158147.1-201ENST00000443970 75 ntBASIC-3.17□□□□□ -2.92
COL12A1Q99715 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-3.17□□□□□ -2.92
COL12A1Q99715 RNU6-835P-201ENST00000516974 104 ntBASIC-3.17□□□□□ -2.92
COL12A1Q99715 RNU6-219P-201ENST00000364728 107 ntBASIC-3.18□□□□□ -2.92
COL12A1Q99715 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.19□□□□□ -2.92
COL12A1Q99715 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-3.19□□□□□ -2.92
COL12A1Q99715 Y_RNA.290-201ENST00000364879 114 ntBASIC-3.2□□□□□ -2.92
COL12A1Q99715 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-3.2□□□□□ -2.92
COL12A1Q99715 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.2□□□□□ -2.92
COL12A1Q99715 SNORA63.7-201ENST00000365579 123 ntBASIC-3.21□□□□□ -2.92
COL12A1Q99715 RNU6-871P-201ENST00000516122 100 ntBASIC-3.21□□□□□ -2.92
COL12A1Q99715 SNORA81.3-201ENST00000517283 198 ntBASIC-3.21□□□□□ -2.92
COL12A1Q99715 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.21□□□□□ -2.92
COL12A1Q99715 RNU6-239P-201ENST00000390990 99 ntBASIC-3.21□□□□□ -2.92
COL12A1Q99715 SNORD30.1-201ENST00000391309 70 ntBASIC-3.21□□□□□ -2.92
COL12A1Q99715 SNORA40.15-201ENST00000516884 107 ntBASIC-3.21□□□□□ -2.92
COL12A1Q99715 MIR4282-201ENST00000583613 67 ntBASIC-3.21□□□□□ -2.92
COL12A1Q99715 RNU6-121P-201ENST00000410525 99 ntBASIC-3.22□□□□□ -2.93
COL12A1Q99715 AC104985.2-201ENST00000620598 500 ntBASIC-3.22□□□□□ -2.93
COL12A1Q99715 AP001340.1-201ENST00000624405 217 ntBASIC-3.22□□□□□ -2.93
COL12A1Q99715 SNORD127-201ENST00000458892 86 ntBASIC-3.23□□□□□ -2.93
COL12A1Q99715 RNY3P16-201ENST00000516338 101 ntBASIC-3.23□□□□□ -2.93
COL12A1Q99715 U7.4-201ENST00000614961 63 ntBASIC-3.23□□□□□ -2.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms