Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 SNORA32.3-201ENST00000384772 121 ntBASIC-0.43□□□□□ -2.48
ZIM3Q96PE6 SNORD18.2-201ENST00000459604 70 ntBASIC-0.43□□□□□ -2.48
ZIM3Q96PE6 IGLVI-20-201ENST00000519296 130 ntBASIC-0.43□□□□□ -2.48
ZIM3Q96PE6 RNU6-92P-201ENST00000605893 104 ntBASIC-0.43□□□□□ -2.48
ZIM3Q96PE6 U2.18-201ENST00000622185 84 ntBASIC-0.43□□□□□ -2.48
ZIM3Q96PE6 SNORD114-17-201ENST00000364699 75 ntBASIC-0.44□□□□□ -2.48
ZIM3Q96PE6 SNORD63.1-201ENST00000516178 80 ntBASIC-0.44□□□□□ -2.48
ZIM3Q96PE6 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.44□□□□□ -2.48
ZIM3Q96PE6 MIR4645-201ENST00000583158 77 ntBASIC-0.44□□□□□ -2.48
ZIM3Q96PE6 RNU6-431P-201ENST00000383874 107 ntBASIC-0.45□□□□□ -2.48
ZIM3Q96PE6 SNORA26.4-201ENST00000391188 123 ntBASIC-0.45□□□□□ -2.48
ZIM3Q96PE6 SNORD57-201ENST00000448188 72 ntBASIC-0.45□□□□□ -2.48
ZIM3Q96PE6 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.45□□□□□ -2.48
ZIM3Q96PE6 RNA5SP192-201ENST00000364404 120 ntBASIC-0.46□□□□□ -2.48
ZIM3Q96PE6 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.46□□□□□ -2.48
ZIM3Q96PE6 MIR147A-201ENST00000385079 72 ntBASIC-0.46□□□□□ -2.48
ZIM3Q96PE6 RNU6-696P-201ENST00000390834 107 ntBASIC-0.46□□□□□ -2.48
ZIM3Q96PE6 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.47□□□□□ -2.48
ZIM3Q96PE6 SNORA25.5-201ENST00000363782 126 ntBASIC-0.47□□□□□ -2.48
ZIM3Q96PE6 AC021146.6-201ENST00000514659 117 ntBASIC-0.47□□□□□ -2.48
ZIM3Q96PE6 RNU6-122P-201ENST00000516818 107 ntBASIC-0.47□□□□□ -2.48
ZIM3Q96PE6 MIR548AZ-201ENST00000616567 95 ntBASIC-0.47□□□□□ -2.48
ZIM3Q96PE6 MIR6779-201ENST00000617283 64 ntBASIC-0.47□□□□□ -2.48
ZIM3Q96PE6 MIR520D-201ENST00000385002 87 ntBASIC-0.48□□□□□ -2.49
ZIM3Q96PE6 MIR1265-201ENST00000408444 86 ntBASIC-0.48□□□□□ -2.49
ZIM3Q96PE6 RPS29P8-201ENST00000445109 171 ntBASIC-0.48□□□□□ -2.49
ZIM3Q96PE6 AC103706.3-201ENST00000636297 85 ntBASIC-0.48□□□□□ -2.49
ZIM3Q96PE6 SNORD115-33-201ENST00000363723 82 ntBASIC-0.49□□□□□ -2.49
ZIM3Q96PE6 AC110620.1-201ENST00000416042 228 ntBASIC-0.49□□□□□ -2.49
ZIM3Q96PE6 MIR7111-201ENST00000619751 72 ntBASIC-0.49□□□□□ -2.49
ZIM3Q96PE6 RNA5SP257-201ENST00000363023 116 ntBASIC-0.5□□□□□ -2.49
ZIM3Q96PE6 RNU6-669P-201ENST00000365575 107 ntBASIC-0.5□□□□□ -2.49
ZIM3Q96PE6 RNU6-471P-201ENST00000383944 106 ntBASIC-0.5□□□□□ -2.49
ZIM3Q96PE6 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.5□□□□□ -2.49
ZIM3Q96PE6 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.5□□□□□ -2.49
ZIM3Q96PE6 SNORD64-201ENST00000386683 67 ntBASIC-0.51□□□□□ -2.49
ZIM3Q96PE6 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.51□□□□□ -2.49
ZIM3Q96PE6 AL500527.2-201ENST00000454105 95 ntBASIC-0.52□□□□□ -2.49
ZIM3Q96PE6 AP001180.6-201ENST00000584918 159 ntBASIC-0.52□□□□□ -2.49
ZIM3Q96PE6 MIR7978-201ENST00000636158 59 ntBASIC-0.52□□□□□ -2.49
ZIM3Q96PE6 RNU6-172P-201ENST00000411000 93 ntBASIC-0.53□□□□□ -2.49
ZIM3Q96PE6 RNA5SP285-201ENST00000516619 119 ntBASIC-0.53□□□□□ -2.49
ZIM3Q96PE6 MIR382-201ENST00000637119 76 ntBASIC-0.53□□□□□ -2.49
ZIM3Q96PE6 RNA5SP26-201ENST00000362406 119 ntBASIC-0.54□□□□□ -2.5
ZIM3Q96PE6 MIR125B1-201ENST00000385236 88 ntBASIC-0.54□□□□□ -2.5
ZIM3Q96PE6 RNU6-258P-201ENST00000390884 101 ntBASIC-0.54□□□□□ -2.5
ZIM3Q96PE6 AC139453.2-201ENST00000487255 133 ntBASIC-0.54□□□□□ -2.5
ZIM3Q96PE6 RNU6-231P-201ENST00000517122 103 ntBASIC-0.54□□□□□ -2.5
ZIM3Q96PE6 MIR6759-201ENST00000638110 65 ntBASIC-0.54□□□□□ -2.5
ZIM3Q96PE6 MIR429-201ENST00000362106 83 ntBASIC-0.55□□□□□ -2.5
ZIM3Q96PE6 SNORD114-25-201ENST00000363742 72 ntBASIC-0.55□□□□□ -2.5
ZIM3Q96PE6 RNU6-608P-201ENST00000383927 104 ntBASIC-0.55□□□□□ -2.5
ZIM3Q96PE6 AL353691.2-201ENST00000443795 59 ntBASIC-0.55□□□□□ -2.5
ZIM3Q96PE6 RNU7-151P-201ENST00000516930 53 ntBASIC-0.55□□□□□ -2.5
ZIM3Q96PE6 SNORA40.16-201ENST00000517238 121 ntBASIC-0.56□□□□□ -2.5
ZIM3Q96PE6 MIR4802-201ENST00000581881 80 ntBASIC-0.56□□□□□ -2.5
ZIM3Q96PE6 MIR3170-201ENST00000582699 77 ntBASIC-0.56□□□□□ -2.5
ZIM3Q96PE6 MIR5683-201ENST00000636514 76 ntBASIC-0.56□□□□□ -2.5
ZIM3Q96PE6 MIR548AA1-201ENST00000384971 97 ntBASIC-0.57□□□□□ -2.5
ZIM3Q96PE6 MIR579-201ENST00000385221 98 ntBASIC-0.57□□□□□ -2.5
ZIM3Q96PE6 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
ZIM3Q96PE6 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.57□□□□□ -2.5
ZIM3Q96PE6 MIR101-1-201ENST00000362265 75 ntBASIC-0.58□□□□□ -2.5
ZIM3Q96PE6 RNU6-446P-201ENST00000362827 106 ntBASIC-0.58□□□□□ -2.5
ZIM3Q96PE6 RNU6-940P-201ENST00000363433 104 ntBASIC-0.58□□□□□ -2.5
ZIM3Q96PE6 RNU7-134P-201ENST00000458997 64 ntBASIC-0.58□□□□□ -2.5
ZIM3Q96PE6 MIR466-201ENST00000580653 84 ntBASIC-0.58□□□□□ -2.5
ZIM3Q96PE6 RNU6-590P-201ENST00000365039 107 ntBASIC-0.59□□□□□ -2.5
ZIM3Q96PE6 RNA5SP451-201ENST00000410588 110 ntBASIC-0.59□□□□□ -2.5
ZIM3Q96PE6 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.59□□□□□ -2.5
ZIM3Q96PE6 MIR5589-201ENST00000579442 60 ntBASIC-0.59□□□□□ -2.5
ZIM3Q96PE6 MIR4490-201ENST00000582647 84 ntBASIC-0.59□□□□□ -2.5
ZIM3Q96PE6 RNU6-974P-201ENST00000384099 108 ntBASIC-0.6□□□□□ -2.51
ZIM3Q96PE6 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.6□□□□□ -2.51
ZIM3Q96PE6 MIR29B1-201ENST00000385015 81 ntBASIC-0.6□□□□□ -2.51
ZIM3Q96PE6 MIR3938-201ENST00000582157 103 ntBASIC-0.6□□□□□ -2.51
ZIM3Q96PE6 MIR7110-201ENST00000612638 86 ntBASIC-0.6□□□□□ -2.51
ZIM3Q96PE6 RNU6-810P-201ENST00000364001 107 ntBASIC-0.61□□□□□ -2.51
ZIM3Q96PE6 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.61□□□□□ -2.51
ZIM3Q96PE6 MIR4493-201ENST00000584016 73 ntBASIC-0.61□□□□□ -2.51
ZIM3Q96PE6 MIR6818-201ENST00000621576 65 ntBASIC-0.61□□□□□ -2.51
ZIM3Q96PE6 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.62□□□□□ -2.51
ZIM3Q96PE6 MIR548Q-201ENST00000408404 100 ntBASIC-0.62□□□□□ -2.51
ZIM3Q96PE6 RPL35AP4-201ENST00000412007 102 ntBASIC-0.62□□□□□ -2.51
ZIM3Q96PE6 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.63□□□□□ -2.51
ZIM3Q96PE6 SNORA40B-201ENST00000385573 128 ntBASIC-0.63□□□□□ -2.51
ZIM3Q96PE6 RNU4-63P-201ENST00000411313 118 ntBASIC-0.63□□□□□ -2.51
ZIM3Q96PE6 MIR224-201ENST00000384889 81 ntBASIC-0.64□□□□□ -2.51
ZIM3Q96PE6 MIR507-201ENST00000385234 94 ntBASIC-0.64□□□□□ -2.51
ZIM3Q96PE6 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
ZIM3Q96PE6 SNORD116.2-201ENST00000391251 93 ntBASIC-0.64□□□□□ -2.51
ZIM3Q96PE6 AC090616.4-201ENST00000448026 115 ntBASIC-0.64□□□□□ -2.51
ZIM3Q96PE6 MIR3681-201ENST00000580089 72 ntBASIC-0.64□□□□□ -2.51
ZIM3Q96PE6 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.64□□□□□ -2.51
ZIM3Q96PE6 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.65□□□□□ -2.51
ZIM3Q96PE6 RNA5SP368-201ENST00000364298 116 ntBASIC-0.65□□□□□ -2.51
ZIM3Q96PE6 SNORD113-4-201ENST00000364802 75 ntBASIC-0.65□□□□□ -2.51
ZIM3Q96PE6 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.65□□□□□ -2.51
ZIM3Q96PE6 MIR604-201ENST00000384880 94 ntBASIC-0.65□□□□□ -2.51
ZIM3Q96PE6 RNU7-160P-201ENST00000516660 62 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms