Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 MIR3170-201ENST00000582699 77 ntBASIC-1.21□□□□□ -2.6
RPUSD4Q96CM3 MIR548V-201ENST00000584165 80 ntBASIC-1.21□□□□□ -2.6
RPUSD4Q96CM3 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.21□□□□□ -2.6
RPUSD4Q96CM3 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.22□□□□□ -2.6
RPUSD4Q96CM3 SNORD45.1-201ENST00000363181 77 ntBASIC-1.22□□□□□ -2.6
RPUSD4Q96CM3 SNORD113-2-201ENST00000391082 72 ntBASIC-1.22□□□□□ -2.6
RPUSD4Q96CM3 MIR548H1-201ENST00000408610 102 ntBASIC-1.22□□□□□ -2.6
RPUSD4Q96CM3 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.22□□□□□ -2.6
RPUSD4Q96CM3 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.23□□□□□ -2.61
RPUSD4Q96CM3 RNU6-228P-201ENST00000362700 106 ntBASIC-1.23□□□□□ -2.61
RPUSD4Q96CM3 AC120024.2-201ENST00000576526 175 ntBASIC-1.23□□□□□ -2.61
RPUSD4Q96CM3 SNORD1B-201ENST00000363091 84 ntBASIC-1.24□□□□□ -2.61
RPUSD4Q96CM3 RNU6-698P-201ENST00000363523 107 ntBASIC-1.24□□□□□ -2.61
RPUSD4Q96CM3 RNU6-34P-201ENST00000364874 107 ntBASIC-1.24□□□□□ -2.61
RPUSD4Q96CM3 AC005520.4-201ENST00000604337 90 ntBASIC-1.24□□□□□ -2.61
RPUSD4Q96CM3 AC013734.1-201ENST00000619329 111 ntBASIC-1.24□□□□□ -2.61
RPUSD4Q96CM3 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.25□□□□□ -2.61
RPUSD4Q96CM3 RNU6-974P-201ENST00000384099 108 ntBASIC-1.25□□□□□ -2.61
RPUSD4Q96CM3 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.25□□□□□ -2.61
RPUSD4Q96CM3 MIR4756-201ENST00000577874 78 ntBASIC-1.25□□□□□ -2.61
RPUSD4Q96CM3 MIR8053-201ENST00000613344 75 ntBASIC-1.25□□□□□ -2.61
RPUSD4Q96CM3 SNORD45A-201ENST00000384512 84 ntBASIC-1.26□□□□□ -2.61
RPUSD4Q96CM3 RNU6-400P-201ENST00000391173 106 ntBASIC-1.26□□□□□ -2.61
RPUSD4Q96CM3 RNA5SP215-201ENST00000363440 122 ntBASIC-1.27□□□□□ -2.61
RPUSD4Q96CM3 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.27□□□□□ -2.61
RPUSD4Q96CM3 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.27□□□□□ -2.61
RPUSD4Q96CM3 MIR429-201ENST00000362106 83 ntBASIC-1.28□□□□□ -2.61
RPUSD4Q96CM3 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.28□□□□□ -2.61
RPUSD4Q96CM3 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.28□□□□□ -2.61
RPUSD4Q96CM3 MIR579-201ENST00000385221 98 ntBASIC-1.28□□□□□ -2.61
RPUSD4Q96CM3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
RPUSD4Q96CM3 MTND4LP1-201ENST00000446263 157 ntBASIC-1.28□□□□□ -2.61
RPUSD4Q96CM3 AC108019.1-201ENST00000512540 175 ntBASIC-1.28□□□□□ -2.61
RPUSD4Q96CM3 MIR548AI-201ENST00000579940 88 ntBASIC-1.28□□□□□ -2.61
RPUSD4Q96CM3 MIR5588-201ENST00000581890 63 ntBASIC-1.28□□□□□ -2.61
RPUSD4Q96CM3 SNORD113.1-201ENST00000363280 73 ntBASIC-1.29□□□□□ -2.62
RPUSD4Q96CM3 SNORD18.1-201ENST00000363807 70 ntBASIC-1.29□□□□□ -2.62
RPUSD4Q96CM3 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.29□□□□□ -2.62
RPUSD4Q96CM3 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.29□□□□□ -2.62
RPUSD4Q96CM3 RNU6-979P-201ENST00000383896 107 ntBASIC-1.29□□□□□ -2.62
RPUSD4Q96CM3 SNORD116-16-201ENST00000384533 92 ntBASIC-1.29□□□□□ -2.62
RPUSD4Q96CM3 RNA5SP67-201ENST00000516422 131 ntBASIC-1.29□□□□□ -2.62
RPUSD4Q96CM3 MIR3123-201ENST00000583417 75 ntBASIC-1.29□□□□□ -2.62
RPUSD4Q96CM3 MIR1246-201ENST00000636535 73 ntBASIC-1.29□□□□□ -2.62
RPUSD4Q96CM3 SNORD115-31-201ENST00000365318 82 ntBASIC-1.3□□□□□ -2.62
RPUSD4Q96CM3 RNU6-695P-201ENST00000391157 104 ntBASIC-1.3□□□□□ -2.62
RPUSD4Q96CM3 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.3□□□□□ -2.62
RPUSD4Q96CM3 MIR7978-201ENST00000636158 59 ntBASIC-1.3□□□□□ -2.62
RPUSD4Q96CM3 MIR4320-201ENST00000636981 65 ntBASIC-1.3□□□□□ -2.62
RPUSD4Q96CM3 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.31□□□□□ -2.62
RPUSD4Q96CM3 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.31□□□□□ -2.62
RPUSD4Q96CM3 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.31□□□□□ -2.62
RPUSD4Q96CM3 RNU6-44P-201ENST00000384045 107 ntBASIC-1.31□□□□□ -2.62
RPUSD4Q96CM3 RNU6-49P-201ENST00000384256 107 ntBASIC-1.31□□□□□ -2.62
RPUSD4Q96CM3 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.31□□□□□ -2.62
RPUSD4Q96CM3 RNY3P8-201ENST00000411366 126 ntBASIC-1.31□□□□□ -2.62
RPUSD4Q96CM3 RNU7-171P-201ENST00000459581 62 ntBASIC-1.31□□□□□ -2.62
RPUSD4Q96CM3 RNU7-151P-201ENST00000516930 53 ntBASIC-1.31□□□□□ -2.62
RPUSD4Q96CM3 IGLL4P-201ENST00000614590 133 ntBASIC-1.31□□□□□ -2.62
RPUSD4Q96CM3 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.32□□□□□ -2.62
RPUSD4Q96CM3 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.32□□□□□ -2.62
RPUSD4Q96CM3 RNY1P1-201ENST00000364372 112 ntBASIC-1.32□□□□□ -2.62
RPUSD4Q96CM3 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.32□□□□□ -2.62
RPUSD4Q96CM3 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.32□□□□□ -2.62
RPUSD4Q96CM3 SNORD116-24-201ENST00000384549 92 ntBASIC-1.32□□□□□ -2.62
RPUSD4Q96CM3 RNA5SP89-201ENST00000410300 108 ntBASIC-1.32□□□□□ -2.62
RPUSD4Q96CM3 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.32□□□□□ -2.62
RPUSD4Q96CM3 RNU6-669P-201ENST00000365575 107 ntBASIC-1.33□□□□□ -2.62
RPUSD4Q96CM3 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.33□□□□□ -2.62
RPUSD4Q96CM3 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.33□□□□□ -2.62
RPUSD4Q96CM3 MIR581-201ENST00000384895 96 ntBASIC-1.34□□□□□ -2.62
RPUSD4Q96CM3 MIR548AA1-201ENST00000384971 97 ntBASIC-1.34□□□□□ -2.62
RPUSD4Q96CM3 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.34□□□□□ -2.62
RPUSD4Q96CM3 U6.97-201ENST00000636904 101 ntBASIC-1.34□□□□□ -2.62
RPUSD4Q96CM3 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.35□□□□□ -2.63
RPUSD4Q96CM3 RNU6-668P-201ENST00000364180 107 ntBASIC-1.35□□□□□ -2.63
RPUSD4Q96CM3 RNU6-153P-201ENST00000364422 104 ntBASIC-1.35□□□□□ -2.63
RPUSD4Q96CM3 RNU6-983P-201ENST00000516004 103 ntBASIC-1.35□□□□□ -2.63
RPUSD4Q96CM3 RNA5SP180-201ENST00000516181 101 ntBASIC-1.35□□□□□ -2.63
RPUSD4Q96CM3 SNORD63.2-201ENST00000516303 64 ntBASIC-1.35□□□□□ -2.63
RPUSD4Q96CM3 MIR548AM-201ENST00000584298 74 ntBASIC-1.35□□□□□ -2.63
RPUSD4Q96CM3 RNA5SP173-201ENST00000364857 136 ntBASIC-1.36□□□□□ -2.63
RPUSD4Q96CM3 MIR125B1-201ENST00000385236 88 ntBASIC-1.36□□□□□ -2.63
RPUSD4Q96CM3 RNU4-88P-201ENST00000411220 86 ntBASIC-1.36□□□□□ -2.63
RPUSD4Q96CM3 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.36□□□□□ -2.63
RPUSD4Q96CM3 MIR548W-201ENST00000581970 74 ntBASIC-1.36□□□□□ -2.63
RPUSD4Q96CM3 RNU6-172P-201ENST00000411000 93 ntBASIC-1.37□□□□□ -2.63
RPUSD4Q96CM3 RNA5SP476-201ENST00000516613 103 ntBASIC-1.37□□□□□ -2.63
RPUSD4Q96CM3 MIR4712-201ENST00000583750 82 ntBASIC-1.37□□□□□ -2.63
RPUSD4Q96CM3 MIR1245B-201ENST00000636115 69 ntBASIC-1.37□□□□□ -2.63
RPUSD4Q96CM3 RNU6-247P-201ENST00000362636 107 ntBASIC-1.38□□□□□ -2.63
RPUSD4Q96CM3 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.38□□□□□ -2.63
RPUSD4Q96CM3 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.38□□□□□ -2.63
RPUSD4Q96CM3 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.38□□□□□ -2.63
RPUSD4Q96CM3 RNU6-523P-201ENST00000516304 54 ntBASIC-1.38□□□□□ -2.63
RPUSD4Q96CM3 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.38□□□□□ -2.63
RPUSD4Q96CM3 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.39□□□□□ -2.63
RPUSD4Q96CM3 RNU6-841P-201ENST00000383872 107 ntBASIC-1.39□□□□□ -2.63
RPUSD4Q96CM3 snoU13.10-201ENST00000459301 103 ntBASIC-1.39□□□□□ -2.63
RPUSD4Q96CM3 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms