Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 RNU6-982P-201ENST00000516216 102 ntBASIC-2.18□□□□□ -2.76
SKA1Q96BD8 RNU6-458P-201ENST00000384179 107 ntBASIC-2.19□□□□□ -2.76
SKA1Q96BD8 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.19□□□□□ -2.76
SKA1Q96BD8 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.19□□□□□ -2.76
SKA1Q96BD8 U6.58-201ENST00000613107 107 ntBASIC-2.19□□□□□ -2.76
SKA1Q96BD8 AC091912.2-201ENST00000624798 167 ntBASIC-2.19□□□□□ -2.76
SKA1Q96BD8 RNU6-164P-201ENST00000364604 103 ntBASIC-2.2□□□□□ -2.76
SKA1Q96BD8 SNORD20-201ENST00000384550 80 ntBASIC-2.2□□□□□ -2.76
SKA1Q96BD8 MIR4484-201ENST00000582855 83 ntBASIC-2.2□□□□□ -2.76
SKA1Q96BD8 MIR8053-201ENST00000613344 75 ntBASIC-2.2□□□□□ -2.76
SKA1Q96BD8 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.21□□□□□ -2.76
SKA1Q96BD8 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.21□□□□□ -2.76
SKA1Q96BD8 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.21□□□□□ -2.76
SKA1Q96BD8 RNU6-698P-201ENST00000363523 107 ntBASIC-2.22□□□□□ -2.76
SKA1Q96BD8 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.22□□□□□ -2.76
SKA1Q96BD8 RNU6-34P-201ENST00000364874 107 ntBASIC-2.22□□□□□ -2.76
SKA1Q96BD8 RNA5SP86-201ENST00000390869 98 ntBASIC-2.22□□□□□ -2.76
SKA1Q96BD8 MIR548Q-201ENST00000408404 100 ntBASIC-2.22□□□□□ -2.76
SKA1Q96BD8 IGLL4P-201ENST00000614590 133 ntBASIC-2.22□□□□□ -2.76
SKA1Q96BD8 SNORD19-201ENST00000391191 68 ntBASIC-2.23□□□□□ -2.77
SKA1Q96BD8 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.23□□□□□ -2.77
SKA1Q96BD8 SNORD18.1-201ENST00000363807 70 ntBASIC-2.24□□□□□ -2.77
SKA1Q96BD8 RNU6-315P-201ENST00000362666 107 ntBASIC-2.25□□□□□ -2.77
SKA1Q96BD8 RNU6-696P-201ENST00000390834 107 ntBASIC-2.26□□□□□ -2.77
SKA1Q96BD8 RNU6-587P-201ENST00000391282 106 ntBASIC-2.26□□□□□ -2.77
SKA1Q96BD8 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.26□□□□□ -2.77
SKA1Q96BD8 RNY1P1-201ENST00000364372 112 ntBASIC-2.27□□□□□ -2.77
SKA1Q96BD8 MIR6874-201ENST00000635894 71 ntBASIC-2.27□□□□□ -2.77
SKA1Q96BD8 RNA5SP215-201ENST00000363440 122 ntBASIC-2.28□□□□□ -2.77
SKA1Q96BD8 RNU6-668P-201ENST00000364180 107 ntBASIC-2.28□□□□□ -2.77
SKA1Q96BD8 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.28□□□□□ -2.77
SKA1Q96BD8 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.28□□□□□ -2.77
SKA1Q96BD8 MIR548H1-201ENST00000408610 102 ntBASIC-2.28□□□□□ -2.77
SKA1Q96BD8 MIR548AI-201ENST00000579940 88 ntBASIC-2.29□□□□□ -2.78
SKA1Q96BD8 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.3□□□□□ -2.78
SKA1Q96BD8 AP002795.1-201ENST00000534879 84 ntBASIC-2.3□□□□□ -2.78
SKA1Q96BD8 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.31□□□□□ -2.78
SKA1Q96BD8 RNU6-168P-201ENST00000516189 101 ntBASIC-2.31□□□□□ -2.78
SKA1Q96BD8 MIR548V-201ENST00000584165 80 ntBASIC-2.31□□□□□ -2.78
SKA1Q96BD8 RNA5SP173-201ENST00000364857 136 ntBASIC-2.33□□□□□ -2.78
SKA1Q96BD8 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.33□□□□□ -2.78
SKA1Q96BD8 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.34□□□□□ -2.78
SKA1Q96BD8 SNORD113.1-201ENST00000363280 73 ntBASIC-2.34□□□□□ -2.78
SKA1Q96BD8 SNORD113-2-201ENST00000391082 72 ntBASIC-2.34□□□□□ -2.78
SKA1Q96BD8 MIR5588-201ENST00000581890 63 ntBASIC-2.34□□□□□ -2.78
SKA1Q96BD8 U4.4-201ENST00000620626 117 ntBASIC-2.34□□□□□ -2.78
SKA1Q96BD8 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.35□□□□□ -2.79
SKA1Q96BD8 RNU6-228P-201ENST00000362700 106 ntBASIC-2.36□□□□□ -2.79
SKA1Q96BD8 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.36□□□□□ -2.79
SKA1Q96BD8 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.37□□□□□ -2.79
SKA1Q96BD8 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.37□□□□□ -2.79
SKA1Q96BD8 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.37□□□□□ -2.79
SKA1Q96BD8 RNU6-44P-201ENST00000384045 107 ntBASIC-2.37□□□□□ -2.79
SKA1Q96BD8 MIR487B-201ENST00000385021 84 ntBASIC-2.37□□□□□ -2.79
SKA1Q96BD8 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.38□□□□□ -2.79
SKA1Q96BD8 MIR630-201ENST00000384957 97 ntBASIC-2.39□□□□□ -2.79
SKA1Q96BD8 RNA5SP89-201ENST00000410300 108 ntBASIC-2.39□□□□□ -2.79
SKA1Q96BD8 RPL35AP4-201ENST00000412007 102 ntBASIC-2.39□□□□□ -2.79
SKA1Q96BD8 RNU6-406P-201ENST00000516470 107 ntBASIC-2.39□□□□□ -2.79
SKA1Q96BD8 RNU6-49P-201ENST00000384256 107 ntBASIC-2.4□□□□□ -2.79
SKA1Q96BD8 RNU6-979P-201ENST00000383896 107 ntBASIC-2.41□□□□□ -2.8
SKA1Q96BD8 SNORD45A-201ENST00000384512 84 ntBASIC-2.41□□□□□ -2.8
SKA1Q96BD8 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.41□□□□□ -2.8
SKA1Q96BD8 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.42□□□□□ -2.8
SKA1Q96BD8 AC090616.4-201ENST00000448026 115 ntBASIC-2.42□□□□□ -2.8
SKA1Q96BD8 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.43□□□□□ -2.8
SKA1Q96BD8 RNU6-598P-201ENST00000364017 105 ntBASIC-2.44□□□□□ -2.8
SKA1Q96BD8 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.44□□□□□ -2.8
SKA1Q96BD8 RNU6-400P-201ENST00000391173 106 ntBASIC-2.45□□□□□ -2.8
SKA1Q96BD8 RNU7-171P-201ENST00000459581 62 ntBASIC-2.46□□□□□ -2.8
SKA1Q96BD8 AC108019.1-201ENST00000512540 175 ntBASIC-2.46□□□□□ -2.8
SKA1Q96BD8 MIR664A-201ENST00000626086 82 ntBASIC-2.46□□□□□ -2.8
SKA1Q96BD8 RNU6-79P-201ENST00000362511 107 ntBASIC-2.47□□□□□ -2.8
SKA1Q96BD8 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.47□□□□□ -2.8
SKA1Q96BD8 RNU6-630P-201ENST00000391258 106 ntBASIC-2.47□□□□□ -2.8
SKA1Q96BD8 RNY4P30-201ENST00000410216 95 ntBASIC-2.47□□□□□ -2.8
SKA1Q96BD8 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.47□□□□□ -2.8
SKA1Q96BD8 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.48□□□□□ -2.81
SKA1Q96BD8 SNORD116-16-201ENST00000384533 92 ntBASIC-2.48□□□□□ -2.81
SKA1Q96BD8 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.48□□□□□ -2.81
SKA1Q96BD8 MIR1245B-201ENST00000636115 69 ntBASIC-2.48□□□□□ -2.81
SKA1Q96BD8 AC018880.2-201ENST00000414265 201 ntBASIC-2.49□□□□□ -2.81
SKA1Q96BD8 RNU6-118P-201ENST00000516552 102 ntBASIC-2.49□□□□□ -2.81
SKA1Q96BD8 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.49□□□□□ -2.81
SKA1Q96BD8 MIR4756-201ENST00000577874 78 ntBASIC-2.49□□□□□ -2.81
SKA1Q96BD8 RNU6-895P-201ENST00000384125 103 ntBASIC-2.5□□□□□ -2.81
SKA1Q96BD8 RNU6-242P-201ENST00000384359 107 ntBASIC-2.5□□□□□ -2.81
SKA1Q96BD8 MIR154-201ENST00000385243 84 ntBASIC-2.5□□□□□ -2.81
SKA1Q96BD8 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.51□□□□□ -2.81
SKA1Q96BD8 RNU6-70P-201ENST00000516438 60 ntBASIC-2.51□□□□□ -2.81
SKA1Q96BD8 MIR4712-201ENST00000583750 82 ntBASIC-2.51□□□□□ -2.81
SKA1Q96BD8 RNU6-119P-201ENST00000364882 107 ntBASIC-2.52□□□□□ -2.81
SKA1Q96BD8 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.52□□□□□ -2.81
SKA1Q96BD8 MIR548AA1-201ENST00000384971 97 ntBASIC-2.53□□□□□ -2.81
SKA1Q96BD8 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.53□□□□□ -2.81
SKA1Q96BD8 U2.18-201ENST00000622185 84 ntBASIC-2.53□□□□□ -2.81
SKA1Q96BD8 MIR23C-201ENST00000579846 100 ntBASIC-2.54□□□□□ -2.82
SKA1Q96BD8 MIR664B-201ENST00000626756 61 ntBASIC-2.54□□□□□ -2.82
SKA1Q96BD8 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.56□□□□□ -2.82
SKA1Q96BD8 MIR496-201ENST00000385226 102 ntBASIC-2.56□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 244.4 ms