Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 Y_RNA.694-201ENST00000516677 117 ntBASIC-1□□□□□ -2.57
CCDC71Q8IV32 SNORD18.1-201ENST00000363807 70 ntBASIC-1.01□□□□□ -2.57
CCDC71Q8IV32 RNA5SP86-201ENST00000390869 98 ntBASIC-1.01□□□□□ -2.57
CCDC71Q8IV32 RNU6-604P-201ENST00000390917 100 ntBASIC-1.01□□□□□ -2.57
CCDC71Q8IV32 RNY4P30-201ENST00000410216 95 ntBASIC-1.01□□□□□ -2.57
CCDC71Q8IV32 RNU7-134P-201ENST00000458997 64 ntBASIC-1.01□□□□□ -2.57
CCDC71Q8IV32 RNU6-980P-201ENST00000516925 103 ntBASIC-1.01□□□□□ -2.57
CCDC71Q8IV32 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.01□□□□□ -2.57
CCDC71Q8IV32 MIR6502-201ENST00000617296 76 ntBASIC-1.01□□□□□ -2.57
CCDC71Q8IV32 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.02□□□□□ -2.57
CCDC71Q8IV32 MIR4484-201ENST00000582855 83 ntBASIC-1.02□□□□□ -2.57
CCDC71Q8IV32 SNORD115-33-201ENST00000363723 82 ntBASIC-1.03□□□□□ -2.57
CCDC71Q8IV32 MIR548C-201ENST00000384815 97 ntBASIC-1.03□□□□□ -2.57
CCDC71Q8IV32 SNORA26.4-201ENST00000391188 123 ntBASIC-1.03□□□□□ -2.57
CCDC71Q8IV32 SNORD54-201ENST00000459159 67 ntBASIC-1.03□□□□□ -2.57
CCDC71Q8IV32 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.04□□□□□ -2.58
CCDC71Q8IV32 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.04□□□□□ -2.58
CCDC71Q8IV32 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
CCDC71Q8IV32 RNU7-171P-201ENST00000459581 62 ntBASIC-1.04□□□□□ -2.58
CCDC71Q8IV32 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.05□□□□□ -2.58
CCDC71Q8IV32 MIR889-201ENST00000401280 79 ntBASIC-1.05□□□□□ -2.58
CCDC71Q8IV32 RNU6-982P-201ENST00000516216 102 ntBASIC-1.05□□□□□ -2.58
CCDC71Q8IV32 RNU7-174P-201ENST00000516248 59 ntBASIC-1.05□□□□□ -2.58
CCDC71Q8IV32 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.05□□□□□ -2.58
CCDC71Q8IV32 MIR4520-1-201ENST00000582609 70 ntBASIC-1.05□□□□□ -2.58
CCDC71Q8IV32 MIR8053-201ENST00000613344 75 ntBASIC-1.05□□□□□ -2.58
CCDC71Q8IV32 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.06□□□□□ -2.58
CCDC71Q8IV32 RNY4-201ENST00000516507 96 ntBASIC-1.07□□□□□ -2.58
CCDC71Q8IV32 MIR548AG1-201ENST00000579932 66 ntBASIC-1.07□□□□□ -2.58
CCDC71Q8IV32 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.08□□□□□ -2.58
CCDC71Q8IV32 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.08□□□□□ -2.58
CCDC71Q8IV32 SNORD115-22-201ENST00000364456 82 ntBASIC-1.08□□□□□ -2.58
CCDC71Q8IV32 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.08□□□□□ -2.58
CCDC71Q8IV32 MTND4LP1-201ENST00000446263 157 ntBASIC-1.08□□□□□ -2.58
CCDC71Q8IV32 SNORD63.1-201ENST00000516178 80 ntBASIC-1.08□□□□□ -2.58
CCDC71Q8IV32 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.09□□□□□ -2.58
CCDC71Q8IV32 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.09□□□□□ -2.58
CCDC71Q8IV32 MIR450A2-201ENST00000385022 100 ntBASIC-1.09□□□□□ -2.58
CCDC71Q8IV32 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.09□□□□□ -2.58
CCDC71Q8IV32 RNU6-228P-201ENST00000362700 106 ntBASIC-1.1□□□□□ -2.59
CCDC71Q8IV32 RNU6-294P-201ENST00000364999 102 ntBASIC-1.1□□□□□ -2.59
CCDC71Q8IV32 RNU6-246P-201ENST00000384702 107 ntBASIC-1.1□□□□□ -2.59
CCDC71Q8IV32 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.1□□□□□ -2.59
CCDC71Q8IV32 snoU83B.1-201ENST00000517136 88 ntBASIC-1.1□□□□□ -2.59
CCDC71Q8IV32 MIR1245B-201ENST00000636115 69 ntBASIC-1.1□□□□□ -2.59
CCDC71Q8IV32 RNU6-698P-201ENST00000363523 107 ntBASIC-1.11□□□□□ -2.59
CCDC71Q8IV32 RNU6-34P-201ENST00000364874 107 ntBASIC-1.11□□□□□ -2.59
CCDC71Q8IV32 RNU6-242P-201ENST00000384359 107 ntBASIC-1.11□□□□□ -2.59
CCDC71Q8IV32 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.11□□□□□ -2.59
CCDC71Q8IV32 SNORD113.1-201ENST00000363280 73 ntBASIC-1.12□□□□□ -2.59
CCDC71Q8IV32 RNU6-587P-201ENST00000391282 106 ntBASIC-1.12□□□□□ -2.59
CCDC71Q8IV32 U7.5-201ENST00000517224 61 ntBASIC-1.12□□□□□ -2.59
CCDC71Q8IV32 MIR3139-201ENST00000579145 76 ntBASIC-1.12□□□□□ -2.59
CCDC71Q8IV32 MIR4712-201ENST00000583750 82 ntBASIC-1.12□□□□□ -2.59
CCDC71Q8IV32 MIR664B-201ENST00000626756 61 ntBASIC-1.12□□□□□ -2.59
CCDC71Q8IV32 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.12□□□□□ -2.59
CCDC71Q8IV32 RNA5SP215-201ENST00000363440 122 ntBASIC-1.13□□□□□ -2.59
CCDC71Q8IV32 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.13□□□□□ -2.59
CCDC71Q8IV32 AL353691.2-201ENST00000443795 59 ntBASIC-1.13□□□□□ -2.59
CCDC71Q8IV32 RNU6-668P-201ENST00000364180 107 ntBASIC-1.14□□□□□ -2.59
CCDC71Q8IV32 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.14□□□□□ -2.59
CCDC71Q8IV32 MIR527-201ENST00000385244 85 ntBASIC-1.14□□□□□ -2.59
CCDC71Q8IV32 AC108019.1-201ENST00000512540 175 ntBASIC-1.14□□□□□ -2.59
CCDC71Q8IV32 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.14□□□□□ -2.59
CCDC71Q8IV32 MIR4666B-201ENST00000578142 81 ntBASIC-1.14□□□□□ -2.59
CCDC71Q8IV32 MIR494-201ENST00000349529 81 ntBASIC-1.15□□□□□ -2.59
CCDC71Q8IV32 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.15□□□□□ -2.59
CCDC71Q8IV32 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.15□□□□□ -2.59
CCDC71Q8IV32 RNU6-820P-201ENST00000384273 107 ntBASIC-1.15□□□□□ -2.59
CCDC71Q8IV32 MIR29B1-201ENST00000385015 81 ntBASIC-1.15□□□□□ -2.59
CCDC71Q8IV32 RNU7-88P-201ENST00000458752 63 ntBASIC-1.15□□□□□ -2.59
CCDC71Q8IV32 MIR4756-201ENST00000577874 78 ntBASIC-1.15□□□□□ -2.59
CCDC71Q8IV32 MIR664A-201ENST00000626086 82 ntBASIC-1.15□□□□□ -2.59
CCDC71Q8IV32 MIR429-201ENST00000362106 83 ntBASIC-1.16□□□□□ -2.6
CCDC71Q8IV32 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.16□□□□□ -2.6
CCDC71Q8IV32 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.16□□□□□ -2.6
CCDC71Q8IV32 RNU6-458P-201ENST00000384179 107 ntBASIC-1.16□□□□□ -2.6
CCDC71Q8IV32 MIR548H1-201ENST00000408610 102 ntBASIC-1.16□□□□□ -2.6
CCDC71Q8IV32 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.16□□□□□ -2.6
CCDC71Q8IV32 MIR5582-201ENST00000579697 68 ntBASIC-1.16□□□□□ -2.6
CCDC71Q8IV32 MIR548V-201ENST00000584165 80 ntBASIC-1.16□□□□□ -2.6
CCDC71Q8IV32 U6.58-201ENST00000613107 107 ntBASIC-1.16□□□□□ -2.6
CCDC71Q8IV32 SNORD45A-201ENST00000384512 84 ntBASIC-1.17□□□□□ -2.6
CCDC71Q8IV32 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.17□□□□□ -2.6
CCDC71Q8IV32 MIR487B-201ENST00000385021 84 ntBASIC-1.17□□□□□ -2.6
CCDC71Q8IV32 U4.4-201ENST00000620626 117 ntBASIC-1.17□□□□□ -2.6
CCDC71Q8IV32 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.18□□□□□ -2.6
CCDC71Q8IV32 MT-TM-201ENST00000387377 68 ntBASIC-1.18□□□□□ -2.6
CCDC71Q8IV32 SNORD19-201ENST00000391191 68 ntBASIC-1.19□□□□□ -2.6
CCDC71Q8IV32 RNU6-70P-201ENST00000516438 60 ntBASIC-1.19□□□□□ -2.6
CCDC71Q8IV32 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.2□□□□□ -2.6
CCDC71Q8IV32 MIR6818-201ENST00000621576 65 ntBASIC-1.2□□□□□ -2.6
CCDC71Q8IV32 RNA5SP173-201ENST00000364857 136 ntBASIC-1.21□□□□□ -2.6
CCDC71Q8IV32 RNU6-696P-201ENST00000390834 107 ntBASIC-1.21□□□□□ -2.6
CCDC71Q8IV32 SNORD113-2-201ENST00000391082 72 ntBASIC-1.21□□□□□ -2.6
CCDC71Q8IV32 RNA5SP405-201ENST00000363059 114 ntBASIC-1.22□□□□□ -2.6
CCDC71Q8IV32 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.22□□□□□ -2.6
CCDC71Q8IV32 MIR630-201ENST00000384957 97 ntBASIC-1.22□□□□□ -2.6
CCDC71Q8IV32 MIR154-201ENST00000385243 84 ntBASIC-1.22□□□□□ -2.6
CCDC71Q8IV32 MIR5683-201ENST00000636514 76 ntBASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms