Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MIR1468-201ENST00000410600 86 ntBASIC0.69□□□□□ -2.3
PRPF38BQ5VTL8 SNORD63.1-201ENST00000516178 80 ntBASIC0.69□□□□□ -2.3
PRPF38BQ5VTL8 MTRNR2L9-201ENST00000622562 75 ntBASIC0.69□□□□□ -2.3
PRPF38BQ5VTL8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
PRPF38BQ5VTL8 AC096531.1-201ENST00000419107 107 ntBASIC0.68□□□□□ -2.3
PRPF38BQ5VTL8 RNU6-900P-201ENST00000384498 102 ntBASIC0.67□□□□□ -2.3
PRPF38BQ5VTL8 IGLVI-20-201ENST00000519296 130 ntBASIC0.67□□□□□ -2.3
PRPF38BQ5VTL8 MIR6514-201ENST00000622549 70 ntBASIC0.67□□□□□ -2.3
PRPF38BQ5VTL8 Y_RNA.185-201ENST00000363894 100 ntBASIC0.65□□□□□ -2.31
PRPF38BQ5VTL8 Y_RNA.613-201ENST00000410726 97 ntBASIC0.65□□□□□ -2.31
PRPF38BQ5VTL8 MIR5704-201ENST00000584029 77 ntBASIC0.65□□□□□ -2.31
PRPF38BQ5VTL8 MIR548H2-201ENST00000408874 88 ntBASIC0.64□□□□□ -2.31
PRPF38BQ5VTL8 RNU6-455P-201ENST00000384681 107 ntBASIC0.63□□□□□ -2.31
PRPF38BQ5VTL8 MIR3170-201ENST00000582699 77 ntBASIC0.63□□□□□ -2.31
PRPF38BQ5VTL8 MIR6507-201ENST00000613630 70 ntBASIC0.63□□□□□ -2.31
PRPF38BQ5VTL8 MIR8068-201ENST00000618032 68 ntBASIC0.63□□□□□ -2.31
PRPF38BQ5VTL8 RNU6-1250P-201ENST00000391218 107 ntBASIC0.62□□□□□ -2.31
PRPF38BQ5VTL8 SNORD63.2-201ENST00000516303 64 ntBASIC0.62□□□□□ -2.31
PRPF38BQ5VTL8 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.62□□□□□ -2.31
PRPF38BQ5VTL8 AC069113.3-201ENST00000521019 150 ntBASIC0.62□□□□□ -2.31
PRPF38BQ5VTL8 CR383656.4-201ENST00000546909 122 ntBASIC0.62□□□□□ -2.31
PRPF38BQ5VTL8 MIR29B1-201ENST00000385015 81 ntBASIC0.61□□□□□ -2.31
PRPF38BQ5VTL8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.6□□□□□ -2.31
PRPF38BQ5VTL8 SNORD45.2-201ENST00000363552 72 ntBASIC0.59□□□□□ -2.31
PRPF38BQ5VTL8 RNA5SP163-201ENST00000410304 99 ntBASIC0.59□□□□□ -2.31
PRPF38BQ5VTL8 AC114737.2-201ENST00000421583 173 ntBASIC0.59□□□□□ -2.31
PRPF38BQ5VTL8 RNU6-180P-201ENST00000516697 61 ntBASIC0.59□□□□□ -2.31
PRPF38BQ5VTL8 RNU6-732P-201ENST00000516033 103 ntBASIC0.58□□□□□ -2.32
PRPF38BQ5VTL8 RNU6-1238P-201ENST00000517215 102 ntBASIC0.58□□□□□ -2.32
PRPF38BQ5VTL8 AC090625.1-201ENST00000357130 210 ntBASIC0.57□□□□□ -2.32
PRPF38BQ5VTL8 MIR148A-201ENST00000362215 68 ntBASIC0.57□□□□□ -2.32
PRPF38BQ5VTL8 SNORA50A-201ENST00000384225 134 ntBASIC0.57□□□□□ -2.32
PRPF38BQ5VTL8 AC104408.1-201ENST00000605241 170 ntBASIC0.57□□□□□ -2.32
PRPF38BQ5VTL8 MIR6854-201ENST00000614935 69 ntBASIC0.57□□□□□ -2.32
PRPF38BQ5VTL8 RNU6-1204P-201ENST00000363948 107 ntBASIC0.56□□□□□ -2.32
PRPF38BQ5VTL8 AC104692.1-201ENST00000472406 90 ntBASIC0.56□□□□□ -2.32
PRPF38BQ5VTL8 SNORD56B-201ENST00000384713 71 ntBASIC0.55□□□□□ -2.32
PRPF38BQ5VTL8 SNX3P1X-201ENST00000414887 175 ntBASIC0.55□□□□□ -2.32
PRPF38BQ5VTL8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
PRPF38BQ5VTL8 SNORA42.1-201ENST00000363515 137 ntBASIC0.54□□□□□ -2.32
PRPF38BQ5VTL8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.54□□□□□ -2.32
PRPF38BQ5VTL8 MIR124-2-201ENST00000385081 109 ntBASIC0.54□□□□□ -2.32
PRPF38BQ5VTL8 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
PRPF38BQ5VTL8 MIR892B-201ENST00000401279 77 ntBASIC0.54□□□□□ -2.32
PRPF38BQ5VTL8 RNU6-1111P-201ENST00000391118 107 ntBASIC0.53□□□□□ -2.32
PRPF38BQ5VTL8 AC114755.3-201ENST00000481111 251 ntBASIC0.53□□□□□ -2.32
PRPF38BQ5VTL8 MIR6718-201ENST00000616153 80 ntBASIC0.53□□□□□ -2.32
PRPF38BQ5VTL8 Y_RNA.321-201ENST00000365149 102 ntBASIC0.52□□□□□ -2.33
PRPF38BQ5VTL8 RNU6-742P-201ENST00000365289 107 ntBASIC0.52□□□□□ -2.33
PRPF38BQ5VTL8 MIR604-201ENST00000384880 94 ntBASIC0.52□□□□□ -2.33
PRPF38BQ5VTL8 MIR610-201ENST00000385139 96 ntBASIC0.52□□□□□ -2.33
PRPF38BQ5VTL8 RNU6-258P-201ENST00000390884 101 ntBASIC0.52□□□□□ -2.33
PRPF38BQ5VTL8 SNORD19-201ENST00000391191 68 ntBASIC0.52□□□□□ -2.33
PRPF38BQ5VTL8 Y_RNA.610-201ENST00000410681 103 ntBASIC0.52□□□□□ -2.33
PRPF38BQ5VTL8 MIR5190-201ENST00000581537 80 ntBASIC0.52□□□□□ -2.33
PRPF38BQ5VTL8 RNU6-530P-201ENST00000391180 107 ntBASIC0.51□□□□□ -2.33
PRPF38BQ5VTL8 AC244250.2-201ENST00000418731 148 ntBASIC0.51□□□□□ -2.33
PRPF38BQ5VTL8 MIR4493-201ENST00000584016 73 ntBASIC0.51□□□□□ -2.33
PRPF38BQ5VTL8 MIR593-201ENST00000384856 100 ntBASIC0.5□□□□□ -2.33
PRPF38BQ5VTL8 MIR520D-201ENST00000385002 87 ntBASIC0.5□□□□□ -2.33
PRPF38BQ5VTL8 MIR4315-1-201ENST00000636800 73 ntBASIC0.5□□□□□ -2.33
PRPF38BQ5VTL8 MIR4315-2-201ENST00000640925 73 ntBASIC0.5□□□□□ -2.33
PRPF38BQ5VTL8 RNU6-901P-201ENST00000384593 106 ntBASIC0.49□□□□□ -2.33
PRPF38BQ5VTL8 RNU6-724P-201ENST00000390958 105 ntBASIC0.49□□□□□ -2.33
PRPF38BQ5VTL8 RNU6-721P-201ENST00000410155 105 ntBASIC0.49□□□□□ -2.33
PRPF38BQ5VTL8 RNU6-822P-201ENST00000362707 106 ntBASIC0.48□□□□□ -2.33
PRPF38BQ5VTL8 MIR548Q-201ENST00000408404 100 ntBASIC0.48□□□□□ -2.33
PRPF38BQ5VTL8 MIR548H4-201ENST00000408689 111 ntBASIC0.48□□□□□ -2.33
PRPF38BQ5VTL8 SNORD95.1-201ENST00000364099 68 ntBASIC0.47□□□□□ -2.33
PRPF38BQ5VTL8 RNU6-1008P-201ENST00000384160 104 ntBASIC0.47□□□□□ -2.33
PRPF38BQ5VTL8 MIR655-201ENST00000362159 97 ntBASIC0.46□□□□□ -2.34
PRPF38BQ5VTL8 RNU6-1233P-201ENST00000362922 102 ntBASIC0.46□□□□□ -2.34
PRPF38BQ5VTL8 AP001180.6-201ENST00000584918 159 ntBASIC0.45□□□□□ -2.34
PRPF38BQ5VTL8 RNU7-165P-201ENST00000458864 60 ntBASIC0.44□□□□□ -2.34
PRPF38BQ5VTL8 MIR4280-201ENST00000582178 76 ntBASIC0.44□□□□□ -2.34
PRPF38BQ5VTL8 SNORD114-31-201ENST00000363219 75 ntBASIC0.43□□□□□ -2.34
PRPF38BQ5VTL8 RNA5SP134-201ENST00000516492 96 ntBASIC0.43□□□□□ -2.34
PRPF38BQ5VTL8 MIR145-201ENST00000384967 88 ntBASIC0.42□□□□□ -2.34
PRPF38BQ5VTL8 MIR4743-201ENST00000584576 69 ntBASIC0.42□□□□□ -2.34
PRPF38BQ5VTL8 SNORA27.2-201ENST00000363365 126 ntBASIC0.41□□□□□ -2.34
PRPF38BQ5VTL8 AL445193.1-201ENST00000441183 141 ntBASIC0.41□□□□□ -2.34
PRPF38BQ5VTL8 RNU7-159P-201ENST00000459284 62 ntBASIC0.41□□□□□ -2.34
PRPF38BQ5VTL8 Y_RNA.699-201ENST00000516803 93 ntBASIC0.41□□□□□ -2.34
PRPF38BQ5VTL8 AP002795.1-201ENST00000534879 84 ntBASIC0.41□□□□□ -2.34
PRPF38BQ5VTL8 RNA5SP214-201ENST00000363378 118 ntBASIC0.39□□□□□ -2.35
PRPF38BQ5VTL8 RNU6-59P-201ENST00000384787 107 ntBASIC0.39□□□□□ -2.35
PRPF38BQ5VTL8 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.39□□□□□ -2.35
PRPF38BQ5VTL8 RNY1P9-201ENST00000532431 109 ntBASIC0.36□□□□□ -2.35
PRPF38BQ5VTL8 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.36□□□□□ -2.35
PRPF38BQ5VTL8 U6.103-201ENST00000637085 61 ntBASIC0.36□□□□□ -2.35
PRPF38BQ5VTL8 SNORD38.3-201ENST00000516599 73 ntBASIC0.35□□□□□ -2.35
PRPF38BQ5VTL8 MIR6851-201ENST00000617060 67 ntBASIC0.35□□□□□ -2.35
PRPF38BQ5VTL8 MIR4426-201ENST00000640330 63 ntBASIC0.34□□□□□ -2.36
PRPF38BQ5VTL8 SNORD114-5-201ENST00000362928 70 ntBASIC0.33□□□□□ -2.36
PRPF38BQ5VTL8 MIR4768-201ENST00000585270 74 ntBASIC0.33□□□□□ -2.36
PRPF38BQ5VTL8 SNORD114-9-201ENST00000364370 72 ntBASIC0.32□□□□□ -2.36
PRPF38BQ5VTL8 RNU6-608P-201ENST00000383927 104 ntBASIC0.32□□□□□ -2.36
PRPF38BQ5VTL8 SNORA26.4-201ENST00000391188 123 ntBASIC0.32□□□□□ -2.36
PRPF38BQ5VTL8 RPS29P8-201ENST00000445109 171 ntBASIC0.32□□□□□ -2.36
PRPF38BQ5VTL8 MIR5683-201ENST00000636514 76 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms