Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 RNU6-820P-201ENST00000384273 107 ntBASIC-1.17□□□□□ -2.6
CD47Q08722 MIR548Q-201ENST00000408404 100 ntBASIC-1.17□□□□□ -2.6
CD47Q08722 U2.18-201ENST00000622185 84 ntBASIC-1.17□□□□□ -2.6
CD47Q08722 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.18□□□□□ -2.6
CD47Q08722 SNORA41B-201ENST00000384785 128 ntBASIC-1.18□□□□□ -2.6
CD47Q08722 MIR29B1-201ENST00000385015 81 ntBASIC-1.18□□□□□ -2.6
CD47Q08722 RNA5SP25-201ENST00000410815 110 ntBASIC-1.18□□□□□ -2.6
CD47Q08722 RPL35AP4-201ENST00000412007 102 ntBASIC-1.18□□□□□ -2.6
CD47Q08722 SCARNA17-201ENST00000516183 144 ntBASIC-1.18□□□□□ -2.6
CD47Q08722 RNY1P9-201ENST00000532431 109 ntBASIC-1.18□□□□□ -2.6
CD47Q08722 SNORD57-201ENST00000448188 72 ntBASIC-1.19□□□□□ -2.6
CD47Q08722 RNU6-687P-201ENST00000516443 89 ntBASIC-1.19□□□□□ -2.6
CD47Q08722 RNA5SP170-201ENST00000517150 101 ntBASIC-1.2□□□□□ -2.6
CD47Q08722 MIR429-201ENST00000362106 83 ntBASIC-1.21□□□□□ -2.6
CD47Q08722 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.21□□□□□ -2.6
CD47Q08722 RNU6-895P-201ENST00000384125 103 ntBASIC-1.21□□□□□ -2.6
CD47Q08722 SNORD116-16-201ENST00000384533 92 ntBASIC-1.21□□□□□ -2.6
CD47Q08722 MIR4490-201ENST00000582647 84 ntBASIC-1.21□□□□□ -2.6
CD47Q08722 SNORD73B-201ENST00000364394 72 ntBASIC-1.22□□□□□ -2.6
CD47Q08722 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.22□□□□□ -2.6
CD47Q08722 RNU6-630P-201ENST00000391258 106 ntBASIC-1.23□□□□□ -2.61
CD47Q08722 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.24□□□□□ -2.61
CD47Q08722 MIR378F-201ENST00000578143 78 ntBASIC-1.24□□□□□ -2.61
CD47Q08722 RNU6-573P-201ENST00000383938 106 ntBASIC-1.25□□□□□ -2.61
CD47Q08722 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.25□□□□□ -2.61
CD47Q08722 MIR520D-201ENST00000385002 87 ntBASIC-1.25□□□□□ -2.61
CD47Q08722 AC090616.4-201ENST00000448026 115 ntBASIC-1.25□□□□□ -2.61
CD47Q08722 SNORD1B-201ENST00000363091 84 ntBASIC-1.26□□□□□ -2.61
CD47Q08722 RNA5SP173-201ENST00000364857 136 ntBASIC-1.27□□□□□ -2.61
CD47Q08722 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.27□□□□□ -2.61
CD47Q08722 RNU6-411P-201ENST00000384451 107 ntBASIC-1.27□□□□□ -2.61
CD47Q08722 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.27□□□□□ -2.61
CD47Q08722 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.28□□□□□ -2.61
CD47Q08722 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.28□□□□□ -2.61
CD47Q08722 U7.4-201ENST00000614961 63 ntBASIC-1.28□□□□□ -2.61
CD47Q08722 RNU6-608P-201ENST00000383927 104 ntBASIC-1.29□□□□□ -2.62
CD47Q08722 RNU6-576P-201ENST00000390854 102 ntBASIC-1.29□□□□□ -2.62
CD47Q08722 RNY4P29-201ENST00000410801 97 ntBASIC-1.29□□□□□ -2.62
CD47Q08722 RNA5SP395-201ENST00000516567 118 ntBASIC-1.29□□□□□ -2.62
CD47Q08722 MIR8485-201ENST00000401372 91 ntBASIC-1.3□□□□□ -2.62
CD47Q08722 RNU6-228P-201ENST00000362700 106 ntBASIC-1.31□□□□□ -2.62
CD47Q08722 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.31□□□□□ -2.62
CD47Q08722 RNU6-164P-201ENST00000364604 103 ntBASIC-1.31□□□□□ -2.62
CD47Q08722 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.31□□□□□ -2.62
CD47Q08722 AC091912.2-201ENST00000624798 167 ntBASIC-1.31□□□□□ -2.62
CD47Q08722 RNU6-540P-201ENST00000384622 101 ntBASIC-1.32□□□□□ -2.62
CD47Q08722 MIR548AA1-201ENST00000384971 97 ntBASIC-1.32□□□□□ -2.62
CD47Q08722 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
CD47Q08722 SNORA26.2-201ENST00000390922 122 ntBASIC-1.32□□□□□ -2.62
CD47Q08722 MIR1255A-201ENST00000408338 113 ntBASIC-1.32□□□□□ -2.62
CD47Q08722 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.32□□□□□ -2.62
CD47Q08722 RNU6-523P-201ENST00000516304 54 ntBASIC-1.32□□□□□ -2.62
CD47Q08722 MIR548AX-201ENST00000580117 73 ntBASIC-1.32□□□□□ -2.62
CD47Q08722 MIR3170-201ENST00000582699 77 ntBASIC-1.32□□□□□ -2.62
CD47Q08722 MIR6874-201ENST00000635894 71 ntBASIC-1.32□□□□□ -2.62
CD47Q08722 SNORD114-15-201ENST00000364687 72 ntBASIC-1.33□□□□□ -2.62
CD47Q08722 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.33□□□□□ -2.62
CD47Q08722 RNU6-634P-201ENST00000459134 106 ntBASIC-1.33□□□□□ -2.62
CD47Q08722 RNU6-542P-201ENST00000516405 103 ntBASIC-1.33□□□□□ -2.62
CD47Q08722 MIR3202-2-201ENST00000635980 79 ntBASIC-1.33□□□□□ -2.62
CD47Q08722 MIR6086-201ENST00000638065 55 ntBASIC-1.33□□□□□ -2.62
CD47Q08722 MIR4324-201ENST00000584846 72 ntBASIC-1.34□□□□□ -2.62
CD47Q08722 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.34□□□□□ -2.62
CD47Q08722 MIR889-201ENST00000401280 79 ntBASIC-1.35□□□□□ -2.63
CD47Q08722 MIR4306-201ENST00000583390 91 ntBASIC-1.35□□□□□ -2.63
CD47Q08722 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.36□□□□□ -2.63
CD47Q08722 MIR579-201ENST00000385221 98 ntBASIC-1.36□□□□□ -2.63
CD47Q08722 RNU6-258P-201ENST00000390884 101 ntBASIC-1.36□□□□□ -2.63
CD47Q08722 RNU6-172P-201ENST00000411000 93 ntBASIC-1.36□□□□□ -2.63
CD47Q08722 RNU6-857P-201ENST00000515893 110 ntBASIC-1.36□□□□□ -2.63
CD47Q08722 RNU7-151P-201ENST00000516930 53 ntBASIC-1.36□□□□□ -2.63
CD47Q08722 RNU6-663P-201ENST00000391105 106 ntBASIC-1.37□□□□□ -2.63
CD47Q08722 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.37□□□□□ -2.63
CD47Q08722 RNU6-92P-201ENST00000605893 104 ntBASIC-1.37□□□□□ -2.63
CD47Q08722 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.38□□□□□ -2.63
CD47Q08722 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.38□□□□□ -2.63
CD47Q08722 RNU6-24P-201ENST00000384440 107 ntBASIC-1.39□□□□□ -2.63
CD47Q08722 RNU6-279P-201ENST00000391297 101 ntBASIC-1.39□□□□□ -2.63
CD47Q08722 MIR6738-201ENST00000619620 64 ntBASIC-1.39□□□□□ -2.63
CD47Q08722 SNORD60.1-201ENST00000362451 73 ntBASIC-1.4□□□□□ -2.63
CD47Q08722 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.4□□□□□ -2.63
CD47Q08722 MIR7978-201ENST00000636158 59 ntBASIC-1.4□□□□□ -2.63
CD47Q08722 RNA5SP225-201ENST00000410874 135 ntBASIC-1.41□□□□□ -2.64
CD47Q08722 RNU6-247P-201ENST00000362636 107 ntBASIC-1.42□□□□□ -2.64
CD47Q08722 AC018880.2-201ENST00000414265 201 ntBASIC-1.42□□□□□ -2.64
CD47Q08722 SNORD78.1-201ENST00000390866 65 ntBASIC-1.43□□□□□ -2.64
CD47Q08722 RNU6-995P-201ENST00000391244 107 ntBASIC-1.43□□□□□ -2.64
CD47Q08722 SNORD30.1-201ENST00000391309 70 ntBASIC-1.44□□□□□ -2.64
CD47Q08722 RNU6-669P-201ENST00000365575 107 ntBASIC-1.45□□□□□ -2.64
CD47Q08722 MIR125B1-201ENST00000385236 88 ntBASIC-1.46□□□□□ -2.64
CD47Q08722 SNORD63.2-201ENST00000516303 64 ntBASIC-1.46□□□□□ -2.64
CD47Q08722 MIR6502-201ENST00000617296 76 ntBASIC-1.46□□□□□ -2.64
CD47Q08722 MIR4679-1-201ENST00000637619 75 ntBASIC-1.46□□□□□ -2.64
CD47Q08722 RNU6-79P-201ENST00000362511 107 ntBASIC-1.47□□□□□ -2.64
CD47Q08722 SNORA25.4-201ENST00000363666 124 ntBASIC-1.47□□□□□ -2.64
CD47Q08722 RNU6-974P-201ENST00000384099 108 ntBASIC-1.47□□□□□ -2.64
CD47Q08722 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.47□□□□□ -2.64
CD47Q08722 RNA5SP192-201ENST00000364404 120 ntBASIC-1.48□□□□□ -2.65
CD47Q08722 AC005520.4-201ENST00000604337 90 ntBASIC-1.48□□□□□ -2.65
CD47Q08722 SNORA25.5-201ENST00000363782 126 ntBASIC-1.49□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms