Protein–RNA interactions for Protein: P63132

HERVK_113, Endogenous retrovirus group K member 113 Pol protein, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P63132 RNU6-696P-201ENST00000390834 107 ntBASIC-1.76□□□□□ -2.69
HERVK_113P63132 MIR4441-201ENST00000582623 100 ntBASIC-1.76□□□□□ -2.69
HERVK_113P63132 MIR1297-201ENST00000637311 77 ntBASIC-1.76□□□□□ -2.69
HERVK_113P63132 MIR365A-201ENST00000362260 87 ntBASIC-1.77□□□□□ -2.69
HERVK_113P63132 SNORD18.1-201ENST00000363807 70 ntBASIC-1.77□□□□□ -2.69
HERVK_113P63132 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.77□□□□□ -2.69
HERVK_113P63132 MIR487B-201ENST00000385021 84 ntBASIC-1.77□□□□□ -2.69
HERVK_113P63132 RNU6-587P-201ENST00000391282 106 ntBASIC-1.77□□□□□ -2.69
HERVK_113P63132 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.78□□□□□ -2.69
HERVK_113P63132 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.78□□□□□ -2.69
HERVK_113P63132 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.78□□□□□ -2.69
HERVK_113P63132 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.78□□□□□ -2.69
HERVK_113P63132 RNU6-630P-201ENST00000391258 106 ntBASIC-1.78□□□□□ -2.69
HERVK_113P63132 RNU6-380P-201ENST00000410207 107 ntBASIC-1.78□□□□□ -2.69
HERVK_113P63132 RNU6-983P-201ENST00000516004 103 ntBASIC-1.78□□□□□ -2.69
HERVK_113P63132 MIR548V-201ENST00000584165 80 ntBASIC-1.78□□□□□ -2.69
HERVK_113P63132 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.79□□□□□ -2.7
HERVK_113P63132 RNU6-698P-201ENST00000363523 107 ntBASIC-1.79□□□□□ -2.7
HERVK_113P63132 RNU6-34P-201ENST00000364874 107 ntBASIC-1.79□□□□□ -2.7
HERVK_113P63132 SNORD20-201ENST00000384550 80 ntBASIC-1.79□□□□□ -2.7
HERVK_113P63132 MIR520D-201ENST00000385002 87 ntBASIC-1.79□□□□□ -2.7
HERVK_113P63132 MTND4LP1-201ENST00000446263 157 ntBASIC-1.79□□□□□ -2.7
HERVK_113P63132 MIR429-201ENST00000362106 83 ntBASIC-1.8□□□□□ -2.7
HERVK_113P63132 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.8□□□□□ -2.7
HERVK_113P63132 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.8□□□□□ -2.7
HERVK_113P63132 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.8□□□□□ -2.7
HERVK_113P63132 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.8□□□□□ -2.7
HERVK_113P63132 U4.4-201ENST00000620626 117 ntBASIC-1.8□□□□□ -2.7
HERVK_113P63132 RNU6-215P-201ENST00000365169 102 ntBASIC-1.81□□□□□ -2.7
HERVK_113P63132 RNU6-695P-201ENST00000391157 104 ntBASIC-1.81□□□□□ -2.7
HERVK_113P63132 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.82□□□□□ -2.7
HERVK_113P63132 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.82□□□□□ -2.7
HERVK_113P63132 RNU6-919P-201ENST00000516731 104 ntBASIC-1.82□□□□□ -2.7
HERVK_113P63132 MIR23C-201ENST00000579846 100 ntBASIC-1.82□□□□□ -2.7
HERVK_113P63132 IGLL4P-201ENST00000614590 133 ntBASIC-1.83□□□□□ -2.7
HERVK_113P63132 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.84□□□□□ -2.7
HERVK_113P63132 RNU6-668P-201ENST00000364180 107 ntBASIC-1.84□□□□□ -2.7
HERVK_113P63132 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.84□□□□□ -2.7
HERVK_113P63132 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.84□□□□□ -2.7
HERVK_113P63132 MIR630-201ENST00000384957 97 ntBASIC-1.84□□□□□ -2.7
HERVK_113P63132 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.84□□□□□ -2.7
HERVK_113P63132 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.84□□□□□ -2.7
HERVK_113P63132 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.84□□□□□ -2.7
HERVK_113P63132 MIR8053-201ENST00000613344 75 ntBASIC-1.84□□□□□ -2.7
HERVK_113P63132 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.84□□□□□ -2.7
HERVK_113P63132 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.84□□□□□ -2.7
HERVK_113P63132 SNORD113.1-201ENST00000363280 73 ntBASIC-1.85□□□□□ -2.71
HERVK_113P63132 RNU6-598P-201ENST00000364017 105 ntBASIC-1.85□□□□□ -2.71
HERVK_113P63132 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.85□□□□□ -2.71
HERVK_113P63132 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.85□□□□□ -2.71
HERVK_113P63132 AC108019.1-201ENST00000512540 175 ntBASIC-1.85□□□□□ -2.71
HERVK_113P63132 U4.2-201ENST00000618561 85 ntBASIC-1.85□□□□□ -2.71
HERVK_113P63132 MIR664A-201ENST00000626086 82 ntBASIC-1.85□□□□□ -2.71
HERVK_113P63132 RNY1P1-201ENST00000364372 112 ntBASIC-1.86□□□□□ -2.71
HERVK_113P63132 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.86□□□□□ -2.71
HERVK_113P63132 RNU6-228P-201ENST00000362700 106 ntBASIC-1.87□□□□□ -2.71
HERVK_113P63132 SNORD45A-201ENST00000384512 84 ntBASIC-1.87□□□□□ -2.71
HERVK_113P63132 AC120024.2-201ENST00000576526 175 ntBASIC-1.87□□□□□ -2.71
HERVK_113P63132 MIR3123-201ENST00000583417 75 ntBASIC-1.87□□□□□ -2.71
HERVK_113P63132 RNU6-315P-201ENST00000362666 107 ntBASIC-1.88□□□□□ -2.71
HERVK_113P63132 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.88□□□□□ -2.71
HERVK_113P63132 RNA5SP215-201ENST00000363440 122 ntBASIC-1.88□□□□□ -2.71
HERVK_113P63132 RNU6-841P-201ENST00000383872 107 ntBASIC-1.88□□□□□ -2.71
HERVK_113P63132 RNU6-49P-201ENST00000384256 107 ntBASIC-1.88□□□□□ -2.71
HERVK_113P63132 RNU6-563P-201ENST00000364872 108 ntBASIC-1.89□□□□□ -2.71
HERVK_113P63132 RNU6-44P-201ENST00000384045 107 ntBASIC-1.9□□□□□ -2.71
HERVK_113P63132 MIR5588-201ENST00000581890 63 ntBASIC-1.9□□□□□ -2.71
HERVK_113P63132 U2.18-201ENST00000622185 84 ntBASIC-1.9□□□□□ -2.71
HERVK_113P63132 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.91□□□□□ -2.72
HERVK_113P63132 SNORD113-2-201ENST00000391082 72 ntBASIC-1.91□□□□□ -2.72
HERVK_113P63132 MIR3170-201ENST00000582699 77 ntBASIC-1.91□□□□□ -2.72
HERVK_113P63132 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.92□□□□□ -2.72
HERVK_113P63132 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.92□□□□□ -2.72
HERVK_113P63132 AL603908.1-201ENST00000406098 201 ntBASIC-1.92□□□□□ -2.72
HERVK_113P63132 MIR4756-201ENST00000577874 78 ntBASIC-1.92□□□□□ -2.72
HERVK_113P63132 MIR664B-201ENST00000626756 61 ntBASIC-1.92□□□□□ -2.72
HERVK_113P63132 MIR548AM-201ENST00000584298 74 ntBASIC-1.93□□□□□ -2.72
HERVK_113P63132 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.93□□□□□ -2.72
HERVK_113P63132 SNORD114-3-201ENST00000364969 75 ntBASIC-1.94□□□□□ -2.72
HERVK_113P63132 RNU6-979P-201ENST00000383896 107 ntBASIC-1.94□□□□□ -2.72
HERVK_113P63132 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.94□□□□□ -2.72
HERVK_113P63132 RNA5SP89-201ENST00000410300 108 ntBASIC-1.94□□□□□ -2.72
HERVK_113P63132 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.94□□□□□ -2.72
HERVK_113P63132 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.94□□□□□ -2.72
HERVK_113P63132 RNY4P27-201ENST00000363341 96 ntBASIC-1.96□□□□□ -2.72
HERVK_113P63132 RNU6-258P-201ENST00000390884 101 ntBASIC-1.96□□□□□ -2.72
HERVK_113P63132 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.97□□□□□ -2.72
HERVK_113P63132 SNORD116-16-201ENST00000384533 92 ntBASIC-1.97□□□□□ -2.72
HERVK_113P63132 MIR548AA1-201ENST00000384971 97 ntBASIC-1.97□□□□□ -2.72
HERVK_113P63132 RNU6-789P-201ENST00000517105 102 ntBASIC-1.97□□□□□ -2.72
HERVK_113P63132 MIR4723-201ENST00000585070 81 ntBASIC-1.97□□□□□ -2.72
HERVK_113P63132 RNA5SP173-201ENST00000364857 136 ntBASIC-1.98□□□□□ -2.73
HERVK_113P63132 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.99□□□□□ -2.73
HERVK_113P63132 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.99□□□□□ -2.73
HERVK_113P63132 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.99□□□□□ -2.73
HERVK_113P63132 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.99□□□□□ -2.73
HERVK_113P63132 RNU6-247P-201ENST00000362636 107 ntBASIC-2□□□□□ -2.73
HERVK_113P63132 SNORA41B-201ENST00000384785 128 ntBASIC-2□□□□□ -2.73
HERVK_113P63132 RNY4P30-201ENST00000410216 95 ntBASIC-2□□□□□ -2.73
HERVK_113P63132 RNU6-70P-201ENST00000516438 60 ntBASIC-2□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms