Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MIR1297-201ENST00000637311 77 ntBASIC-1.84□□□□□ -2.7
PKNOX1P55347 RNY4P27-201ENST00000363341 96 ntBASIC-1.85□□□□□ -2.71
PKNOX1P55347 RNU6-598P-201ENST00000364017 105 ntBASIC-1.85□□□□□ -2.71
PKNOX1P55347 RNU6-630P-201ENST00000391258 106 ntBASIC-1.85□□□□□ -2.71
PKNOX1P55347 MIR3910-1-201ENST00000580936 111 ntBASIC-1.85□□□□□ -2.71
PKNOX1P55347 AC006160.2-201ENST00000637708 154 ntBASIC-1.85□□□□□ -2.71
PKNOX1P55347 RNU6-608P-201ENST00000383927 104 ntBASIC-1.86□□□□□ -2.71
PKNOX1P55347 MIR548H1-201ENST00000408610 102 ntBASIC-1.86□□□□□ -2.71
PKNOX1P55347 RNU6-844P-201ENST00000517175 102 ntBASIC-1.86□□□□□ -2.71
PKNOX1P55347 RNU6-32P-201ENST00000383948 107 ntBASIC-1.87□□□□□ -2.71
PKNOX1P55347 RNU6-13P-201ENST00000384248 107 ntBASIC-1.87□□□□□ -2.71
PKNOX1P55347 RNU6-12P-201ENST00000384604 107 ntBASIC-1.87□□□□□ -2.71
PKNOX1P55347 RNU6-41P-201ENST00000384741 107 ntBASIC-1.87□□□□□ -2.71
PKNOX1P55347 RNU6-400P-201ENST00000391173 106 ntBASIC-1.87□□□□□ -2.71
PKNOX1P55347 MIR548V-201ENST00000584165 80 ntBASIC-1.87□□□□□ -2.71
PKNOX1P55347 RNU6-79P-201ENST00000362511 107 ntBASIC-1.88□□□□□ -2.71
PKNOX1P55347 MIR520D-201ENST00000385002 87 ntBASIC-1.88□□□□□ -2.71
PKNOX1P55347 MTND4LP1-201ENST00000446263 157 ntBASIC-1.88□□□□□ -2.71
PKNOX1P55347 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.89□□□□□ -2.71
PKNOX1P55347 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.89□□□□□ -2.71
PKNOX1P55347 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.89□□□□□ -2.71
PKNOX1P55347 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.89□□□□□ -2.71
PKNOX1P55347 SNORD113-1-201ENST00000365321 69 ntBASIC-1.9□□□□□ -2.71
PKNOX1P55347 MIR487B-201ENST00000385021 84 ntBASIC-1.9□□□□□ -2.71
PKNOX1P55347 SNORA63.4-201ENST00000362763 126 ntBASIC-1.91□□□□□ -2.72
PKNOX1P55347 MIR630-201ENST00000384957 97 ntBASIC-1.91□□□□□ -2.72
PKNOX1P55347 MIR1207-201ENST00000408249 87 ntBASIC-1.91□□□□□ -2.72
PKNOX1P55347 U2.18-201ENST00000622185 84 ntBASIC-1.91□□□□□ -2.72
PKNOX1P55347 SNORD113.1-201ENST00000363280 73 ntBASIC-1.92□□□□□ -2.72
PKNOX1P55347 RNU6-147P-201ENST00000383983 107 ntBASIC-1.92□□□□□ -2.72
PKNOX1P55347 MIR8053-201ENST00000613344 75 ntBASIC-1.92□□□□□ -2.72
PKNOX1P55347 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.93□□□□□ -2.72
PKNOX1P55347 RNA5SP215-201ENST00000363440 122 ntBASIC-1.93□□□□□ -2.72
PKNOX1P55347 RNU6-380P-201ENST00000410207 107 ntBASIC-1.93□□□□□ -2.72
PKNOX1P55347 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.93□□□□□ -2.72
PKNOX1P55347 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.93□□□□□ -2.72
PKNOX1P55347 RNU6-668P-201ENST00000364180 107 ntBASIC-1.94□□□□□ -2.72
PKNOX1P55347 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.94□□□□□ -2.72
PKNOX1P55347 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.94□□□□□ -2.72
PKNOX1P55347 SNORD45A-201ENST00000384512 84 ntBASIC-1.95□□□□□ -2.72
PKNOX1P55347 RNU6-540P-201ENST00000384622 101 ntBASIC-1.95□□□□□ -2.72
PKNOX1P55347 SNORD113-2-201ENST00000391082 72 ntBASIC-1.95□□□□□ -2.72
PKNOX1P55347 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.95□□□□□ -2.72
PKNOX1P55347 MIR664A-201ENST00000626086 82 ntBASIC-1.95□□□□□ -2.72
PKNOX1P55347 RNU6-315P-201ENST00000362666 107 ntBASIC-1.96□□□□□ -2.72
PKNOX1P55347 SNORD116-16-201ENST00000384533 92 ntBASIC-1.96□□□□□ -2.72
PKNOX1P55347 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.96□□□□□ -2.72
PKNOX1P55347 MIR23C-201ENST00000579846 100 ntBASIC-1.96□□□□□ -2.72
PKNOX1P55347 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.97□□□□□ -2.72
PKNOX1P55347 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.97□□□□□ -2.72
PKNOX1P55347 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.97□□□□□ -2.72
PKNOX1P55347 MIR3170-201ENST00000582699 77 ntBASIC-1.97□□□□□ -2.72
PKNOX1P55347 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.98□□□□□ -2.73
PKNOX1P55347 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.98□□□□□ -2.73
PKNOX1P55347 RNU6-983P-201ENST00000516004 103 ntBASIC-1.98□□□□□ -2.73
PKNOX1P55347 SNORD18.1-201ENST00000363807 70 ntBASIC-1.99□□□□□ -2.73
PKNOX1P55347 RNU6-563P-201ENST00000364872 108 ntBASIC-1.99□□□□□ -2.73
PKNOX1P55347 RNU6-215P-201ENST00000365169 102 ntBASIC-1.99□□□□□ -2.73
PKNOX1P55347 MIR548AA1-201ENST00000384971 97 ntBASIC-1.99□□□□□ -2.73
PKNOX1P55347 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.99□□□□□ -2.73
PKNOX1P55347 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.99□□□□□ -2.73
PKNOX1P55347 RNU6-695P-201ENST00000391157 104 ntBASIC-2□□□□□ -2.73
PKNOX1P55347 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.01□□□□□ -2.73
PKNOX1P55347 SNORA41B-201ENST00000384785 128 ntBASIC-2.01□□□□□ -2.73
PKNOX1P55347 AC120024.2-201ENST00000576526 175 ntBASIC-2.01□□□□□ -2.73
PKNOX1P55347 MIR5588-201ENST00000581890 63 ntBASIC-2.01□□□□□ -2.73
PKNOX1P55347 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.02□□□□□ -2.73
PKNOX1P55347 RNA5SP173-201ENST00000364857 136 ntBASIC-2.02□□□□□ -2.73
PKNOX1P55347 SNORD20-201ENST00000384550 80 ntBASIC-2.02□□□□□ -2.73
PKNOX1P55347 RNU6-919P-201ENST00000516731 104 ntBASIC-2.02□□□□□ -2.73
PKNOX1P55347 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.03□□□□□ -2.73
PKNOX1P55347 SNORD1B-201ENST00000363091 84 ntBASIC-2.03□□□□□ -2.73
PKNOX1P55347 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.03□□□□□ -2.73
PKNOX1P55347 RNU6-49P-201ENST00000384256 107 ntBASIC-2.03□□□□□ -2.73
PKNOX1P55347 IGLL4P-201ENST00000614590 133 ntBASIC-2.03□□□□□ -2.73
PKNOX1P55347 RNU6-228P-201ENST00000362700 106 ntBASIC-2.04□□□□□ -2.74
PKNOX1P55347 RNY1P1-201ENST00000364372 112 ntBASIC-2.04□□□□□ -2.74
PKNOX1P55347 RNU6-979P-201ENST00000383896 107 ntBASIC-2.04□□□□□ -2.74
PKNOX1P55347 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.05□□□□□ -2.74
PKNOX1P55347 AL606753.1-201ENST00000427435 87 ntBASIC-2.05□□□□□ -2.74
PKNOX1P55347 RNU6-258P-201ENST00000390884 101 ntBASIC-2.06□□□□□ -2.74
PKNOX1P55347 MIR3123-201ENST00000583417 75 ntBASIC-2.06□□□□□ -2.74
PKNOX1P55347 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.06□□□□□ -2.74
PKNOX1P55347 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.07□□□□□ -2.74
PKNOX1P55347 AC108019.1-201ENST00000512540 175 ntBASIC-2.07□□□□□ -2.74
PKNOX1P55347 RNU6-247P-201ENST00000362636 107 ntBASIC-2.08□□□□□ -2.74
PKNOX1P55347 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.08□□□□□ -2.74
PKNOX1P55347 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.08□□□□□ -2.74
PKNOX1P55347 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.09□□□□□ -2.74
PKNOX1P55347 MIR4712-201ENST00000583750 82 ntBASIC-2.09□□□□□ -2.74
PKNOX1P55347 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.1□□□□□ -2.75
PKNOX1P55347 SNORD116-24-201ENST00000384549 92 ntBASIC-2.1□□□□□ -2.75
PKNOX1P55347 RNU7-171P-201ENST00000459581 62 ntBASIC-2.1□□□□□ -2.75
PKNOX1P55347 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.1□□□□□ -2.75
PKNOX1P55347 MIR4756-201ENST00000577874 78 ntBASIC-2.11□□□□□ -2.75
PKNOX1P55347 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.11□□□□□ -2.75
PKNOX1P55347 RNU6-841P-201ENST00000383872 107 ntBASIC-2.12□□□□□ -2.75
PKNOX1P55347 RNU6-995P-201ENST00000391244 107 ntBASIC-2.12□□□□□ -2.75
PKNOX1P55347 RNA5SP89-201ENST00000410300 108 ntBASIC-2.12□□□□□ -2.75
PKNOX1P55347 RNU6-70P-201ENST00000516438 60 ntBASIC-2.12□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 324.9 ms