Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 MIR4636-201ENST00000582271 80 ntBASIC-0.14□□□□□ -2.43
TTC3P53804 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.14□□□□□ -2.43
TTC3P53804 RNU6-829P-201ENST00000363700 112 ntBASIC-0.14□□□□□ -2.43
TTC3P53804 SNORD49B-201ENST00000365172 72 ntBASIC-0.14□□□□□ -2.43
TTC3P53804 SNORD74.6-201ENST00000364796 70 ntBASIC-0.16□□□□□ -2.43
TTC3P53804 SNORD116.2-201ENST00000391251 93 ntBASIC-0.16□□□□□ -2.43
TTC3P53804 RNA5SP66-201ENST00000517178 101 ntBASIC-0.16□□□□□ -2.43
TTC3P53804 SNORA32.3-201ENST00000384772 121 ntBASIC-0.16□□□□□ -2.44
TTC3P53804 SNORA40B-201ENST00000385573 128 ntBASIC-0.17□□□□□ -2.44
TTC3P53804 SNORA13-201ENST00000458790 133 ntBASIC-0.17□□□□□ -2.44
TTC3P53804 HAR1A.1-201ENST00000459583 118 ntBASIC-0.17□□□□□ -2.44
TTC3P53804 SNORD38.3-201ENST00000516599 73 ntBASIC-0.17□□□□□ -2.44
TTC3P53804 U2.18-201ENST00000622185 84 ntBASIC-0.17□□□□□ -2.44
TTC3P53804 MIR518B-201ENST00000385127 83 ntBASIC-0.18□□□□□ -2.44
TTC3P53804 MIR6086-201ENST00000638065 55 ntBASIC-0.18□□□□□ -2.44
TTC3P53804 MIR214-201ENST00000385214 110 ntBASIC-0.18□□□□□ -2.44
TTC3P53804 MIR4802-201ENST00000581881 80 ntBASIC-0.19□□□□□ -2.44
TTC3P53804 SNORD14C-201ENST00000365382 88 ntBASIC-0.2□□□□□ -2.44
TTC3P53804 SNORA26.4-201ENST00000391188 123 ntBASIC-0.2□□□□□ -2.44
TTC3P53804 RNU6-122P-201ENST00000516818 107 ntBASIC-0.2□□□□□ -2.44
TTC3P53804 SNORA40.16-201ENST00000517238 121 ntBASIC-0.2□□□□□ -2.44
TTC3P53804 MIR4788-201ENST00000639104 80 ntBASIC-0.2□□□□□ -2.44
TTC3P53804 MIR3179-1-201ENST00000578940 84 ntBASIC-0.2□□□□□ -2.44
TTC3P53804 MIR3179-2-201ENST00000579107 84 ntBASIC-0.2□□□□□ -2.44
TTC3P53804 MIR3179-3-201ENST00000579566 84 ntBASIC-0.2□□□□□ -2.44
TTC3P53804 MIR3179-4-201ENST00000617599 84 ntBASIC-0.2□□□□□ -2.44
TTC3P53804 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.21□□□□□ -2.44
TTC3P53804 MIR4645-201ENST00000583158 77 ntBASIC-0.21□□□□□ -2.44
TTC3P53804 MIR7110-201ENST00000612638 86 ntBASIC-0.21□□□□□ -2.44
TTC3P53804 RNU6-446P-201ENST00000362827 106 ntBASIC-0.22□□□□□ -2.44
TTC3P53804 RNU6-987P-201ENST00000384759 104 ntBASIC-0.22□□□□□ -2.44
TTC3P53804 MIR548X-201ENST00000580069 75 ntBASIC-0.22□□□□□ -2.44
TTC3P53804 MIR7978-201ENST00000636158 59 ntBASIC-0.22□□□□□ -2.44
TTC3P53804 AP000533.3-201ENST00000447704 118 ntBASIC-0.23□□□□□ -2.45
TTC3P53804 AP001180.6-201ENST00000584918 159 ntBASIC-0.23□□□□□ -2.45
TTC3P53804 MIR371B-201ENST00000638082 66 ntBASIC-0.23□□□□□ -2.45
TTC3P53804 RNU6-810P-201ENST00000364001 107 ntBASIC-0.23□□□□□ -2.45
TTC3P53804 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.23□□□□□ -2.45
TTC3P53804 AL445193.1-201ENST00000441183 141 ntBASIC-0.23□□□□□ -2.45
TTC3P53804 MIR4490-201ENST00000582647 84 ntBASIC-0.23□□□□□ -2.45
TTC3P53804 RNU6-231P-201ENST00000517122 103 ntBASIC-0.24□□□□□ -2.45
TTC3P53804 RNU6-172P-201ENST00000411000 93 ntBASIC-0.25□□□□□ -2.45
TTC3P53804 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.25□□□□□ -2.45
TTC3P53804 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.25□□□□□ -2.45
TTC3P53804 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
TTC3P53804 SNORD75.1-201ENST00000408373 60 ntBASIC-0.26□□□□□ -2.45
TTC3P53804 AP002795.1-201ENST00000534879 84 ntBASIC-0.26□□□□□ -2.45
TTC3P53804 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.26□□□□□ -2.45
TTC3P53804 MIR204-201ENST00000385200 110 ntBASIC-0.26□□□□□ -2.45
TTC3P53804 RNA5SP25-201ENST00000410815 110 ntBASIC-0.26□□□□□ -2.45
TTC3P53804 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.27□□□□□ -2.45
TTC3P53804 Z95118.1-201ENST00000421372 247 ntBASIC-0.27□□□□□ -2.45
TTC3P53804 SNORD113-4-201ENST00000364802 75 ntBASIC-0.28□□□□□ -2.45
TTC3P53804 RNU4-37P-201ENST00000410214 84 ntBASIC-0.28□□□□□ -2.45
TTC3P53804 MIR579-201ENST00000385221 98 ntBASIC-0.29□□□□□ -2.46
TTC3P53804 SNORD19-201ENST00000391191 68 ntBASIC-0.29□□□□□ -2.46
TTC3P53804 MIR548Q-201ENST00000408404 100 ntBASIC-0.29□□□□□ -2.46
TTC3P53804 RNU6-721P-201ENST00000410155 105 ntBASIC-0.29□□□□□ -2.46
TTC3P53804 IGLVI-20-201ENST00000519296 130 ntBASIC-0.29□□□□□ -2.46
TTC3P53804 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.3□□□□□ -2.46
TTC3P53804 AL353691.2-201ENST00000443795 59 ntBASIC-0.3□□□□□ -2.46
TTC3P53804 RNU7-160P-201ENST00000516660 62 ntBASIC-0.3□□□□□ -2.46
TTC3P53804 MIR3170-201ENST00000582699 77 ntBASIC-0.3□□□□□ -2.46
TTC3P53804 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.3□□□□□ -2.46
TTC3P53804 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.31□□□□□ -2.46
TTC3P53804 SNORD114-14-201ENST00000362723 75 ntBASIC-0.31□□□□□ -2.46
TTC3P53804 RNU4-33P-201ENST00000364316 85 ntBASIC-0.31□□□□□ -2.46
TTC3P53804 MIR4493-201ENST00000584016 73 ntBASIC-0.31□□□□□ -2.46
TTC3P53804 RNU6-247P-201ENST00000362636 107 ntBASIC-0.31□□□□□ -2.46
TTC3P53804 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.31□□□□□ -2.46
TTC3P53804 RNU6-598P-201ENST00000364017 105 ntBASIC-0.33□□□□□ -2.46
TTC3P53804 RNU6-995P-201ENST00000391244 107 ntBASIC-0.33□□□□□ -2.46
TTC3P53804 RNU6-758P-201ENST00000516292 89 ntBASIC-0.33□□□□□ -2.46
TTC3P53804 MIR4436A-201ENST00000585278 85 ntBASIC-0.33□□□□□ -2.46
TTC3P53804 SNORD114-17-201ENST00000364699 75 ntBASIC-0.34□□□□□ -2.46
TTC3P53804 AC021146.6-201ENST00000514659 117 ntBASIC-0.34□□□□□ -2.46
TTC3P53804 SNORD115-33-201ENST00000363723 82 ntBASIC-0.35□□□□□ -2.46
TTC3P53804 RNA5SP368-201ENST00000364298 116 ntBASIC-0.35□□□□□ -2.46
TTC3P53804 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.35□□□□□ -2.46
TTC3P53804 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.35□□□□□ -2.46
TTC3P53804 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.35□□□□□ -2.46
TTC3P53804 RNU6-419P-201ENST00000517030 63 ntBASIC-0.35□□□□□ -2.46
TTC3P53804 SNORA32.1-201ENST00000364514 115 ntBASIC-0.35□□□□□ -2.47
TTC3P53804 MIR125B1-201ENST00000385236 88 ntBASIC-0.35□□□□□ -2.47
TTC3P53804 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.36□□□□□ -2.47
TTC3P53804 SNORD114-31-201ENST00000363219 75 ntBASIC-0.36□□□□□ -2.47
TTC3P53804 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.36□□□□□ -2.47
TTC3P53804 AC079150.2-201ENST00000443733 78 ntBASIC-0.36□□□□□ -2.47
TTC3P53804 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.36□□□□□ -2.47
TTC3P53804 SNORD95.1-201ENST00000364099 68 ntBASIC-0.37□□□□□ -2.47
TTC3P53804 RNU6-320P-201ENST00000516511 106 ntBASIC-0.37□□□□□ -2.47
TTC3P53804 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.37□□□□□ -2.47
TTC3P53804 RNU6-974P-201ENST00000384099 108 ntBASIC-0.38□□□□□ -2.47
TTC3P53804 SNORD126-201ENST00000459475 77 ntBASIC-0.38□□□□□ -2.47
TTC3P53804 RNU6-980P-201ENST00000516925 103 ntBASIC-0.38□□□□□ -2.47
TTC3P53804 SNORD45.2-201ENST00000363552 72 ntBASIC-0.38□□□□□ -2.47
TTC3P53804 MIR196A2-201ENST00000385189 110 ntBASIC-0.38□□□□□ -2.47
TTC3P53804 SNORA3B-201ENST00000391305 131 ntBASIC-0.38□□□□□ -2.47
TTC3P53804 RNU6-732P-201ENST00000516033 103 ntBASIC-0.4□□□□□ -2.47
TTC3P53804 RNA5SP169-201ENST00000517268 117 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms