Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.39□□□□□ -2.63
NEK3P51956 RNU6-246P-201ENST00000384702 107 ntBASIC-1.39□□□□□ -2.63
NEK3P51956 MTND4LP1-201ENST00000446263 157 ntBASIC-1.39□□□□□ -2.63
NEK3P51956 RNU6-732P-201ENST00000516033 103 ntBASIC-1.39□□□□□ -2.63
NEK3P51956 MIR4484-201ENST00000582855 83 ntBASIC-1.39□□□□□ -2.63
NEK3P51956 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.4□□□□□ -2.63
NEK3P51956 RNU7-88P-201ENST00000458752 63 ntBASIC-1.4□□□□□ -2.63
NEK3P51956 U7.5-201ENST00000517224 61 ntBASIC-1.4□□□□□ -2.63
NEK3P51956 MIR1245B-201ENST00000636115 69 ntBASIC-1.4□□□□□ -2.63
NEK3P51956 MIR4320-201ENST00000636981 65 ntBASIC-1.4□□□□□ -2.63
NEK3P51956 MIR548C-201ENST00000384815 97 ntBASIC-1.41□□□□□ -2.64
NEK3P51956 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.41□□□□□ -2.64
NEK3P51956 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.41□□□□□ -2.64
NEK3P51956 MIR5683-201ENST00000636514 76 ntBASIC-1.41□□□□□ -2.64
NEK3P51956 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.44□□□□□ -2.64
NEK3P51956 RNA5SP86-201ENST00000390869 98 ntBASIC-1.44□□□□□ -2.64
NEK3P51956 RNU7-174P-201ENST00000516248 59 ntBASIC-1.44□□□□□ -2.64
NEK3P51956 RNU6-820P-201ENST00000384273 107 ntBASIC-1.45□□□□□ -2.64
NEK3P51956 MIR4712-201ENST00000583750 82 ntBASIC-1.45□□□□□ -2.64
NEK3P51956 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.45□□□□□ -2.64
NEK3P51956 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.46□□□□□ -2.64
NEK3P51956 MIR4490-201ENST00000582647 84 ntBASIC-1.46□□□□□ -2.64
NEK3P51956 MIR494-201ENST00000349529 81 ntBASIC-1.47□□□□□ -2.64
NEK3P51956 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.47□□□□□ -2.64
NEK3P51956 RNU6-982P-201ENST00000516216 102 ntBASIC-1.47□□□□□ -2.64
NEK3P51956 MIR5582-201ENST00000579697 68 ntBASIC-1.47□□□□□ -2.64
NEK3P51956 RNA5SP215-201ENST00000363440 122 ntBASIC-1.48□□□□□ -2.65
NEK3P51956 MIR429-201ENST00000362106 83 ntBASIC-1.49□□□□□ -2.65
NEK3P51956 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.49□□□□□ -2.65
NEK3P51956 MIR4666B-201ENST00000578142 81 ntBASIC-1.49□□□□□ -2.65
NEK3P51956 RNU6-79P-201ENST00000362511 107 ntBASIC-1.5□□□□□ -2.65
NEK3P51956 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.5□□□□□ -2.65
NEK3P51956 RNU6-698P-201ENST00000363523 107 ntBASIC-1.5□□□□□ -2.65
NEK3P51956 RNU6-34P-201ENST00000364874 107 ntBASIC-1.5□□□□□ -2.65
NEK3P51956 MIR487B-201ENST00000385021 84 ntBASIC-1.5□□□□□ -2.65
NEK3P51956 MIR548H1-201ENST00000408610 102 ntBASIC-1.5□□□□□ -2.65
NEK3P51956 RNU6-668P-201ENST00000364180 107 ntBASIC-1.51□□□□□ -2.65
NEK3P51956 RNU6-540P-201ENST00000384622 101 ntBASIC-1.51□□□□□ -2.65
NEK3P51956 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.51□□□□□ -2.65
NEK3P51956 SNORD113.1-201ENST00000363280 73 ntBASIC-1.52□□□□□ -2.65
NEK3P51956 MIR1468-201ENST00000410600 86 ntBASIC-1.52□□□□□ -2.65
NEK3P51956 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.53□□□□□ -2.65
NEK3P51956 MIR548Q-201ENST00000408404 100 ntBASIC-1.53□□□□□ -2.65
NEK3P51956 AC018880.2-201ENST00000414265 201 ntBASIC-1.53□□□□□ -2.65
NEK3P51956 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.54□□□□□ -2.66
NEK3P51956 RNU6-608P-201ENST00000383927 104 ntBASIC-1.54□□□□□ -2.66
NEK3P51956 MIR520D-201ENST00000385002 87 ntBASIC-1.55□□□□□ -2.66
NEK3P51956 MIR601-201ENST00000385256 79 ntBASIC-1.55□□□□□ -2.66
NEK3P51956 RNA5SP173-201ENST00000364857 136 ntBASIC-1.56□□□□□ -2.66
NEK3P51956 RNU6-400P-201ENST00000391173 106 ntBASIC-1.56□□□□□ -2.66
NEK3P51956 RNU6-587P-201ENST00000391282 106 ntBASIC-1.56□□□□□ -2.66
NEK3P51956 RNA5SP180-201ENST00000516181 101 ntBASIC-1.56□□□□□ -2.66
NEK3P51956 MIR1246-201ENST00000636535 73 ntBASIC-1.56□□□□□ -2.66
NEK3P51956 MIR198-201ENST00000637333 62 ntBASIC-1.56□□□□□ -2.66
NEK3P51956 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.57□□□□□ -2.66
NEK3P51956 SNORD18.1-201ENST00000363807 70 ntBASIC-1.58□□□□□ -2.66
NEK3P51956 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.58□□□□□ -2.66
NEK3P51956 RNU6-630P-201ENST00000391258 106 ntBASIC-1.58□□□□□ -2.66
NEK3P51956 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.58□□□□□ -2.66
NEK3P51956 RNU6-228P-201ENST00000362700 106 ntBASIC-1.59□□□□□ -2.66
NEK3P51956 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.59□□□□□ -2.66
NEK3P51956 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.59□□□□□ -2.66
NEK3P51956 RNU6-458P-201ENST00000384179 107 ntBASIC-1.59□□□□□ -2.66
NEK3P51956 RNU6-70P-201ENST00000516438 60 ntBASIC-1.59□□□□□ -2.66
NEK3P51956 U6.58-201ENST00000613107 107 ntBASIC-1.59□□□□□ -2.66
NEK3P51956 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.6□□□□□ -2.67
NEK3P51956 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.6□□□□□ -2.67
NEK3P51956 SNORD45A-201ENST00000384512 84 ntBASIC-1.6□□□□□ -2.67
NEK3P51956 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.6□□□□□ -2.67
NEK3P51956 MIR548V-201ENST00000584165 80 ntBASIC-1.6□□□□□ -2.67
NEK3P51956 MIR154-201ENST00000385243 84 ntBASIC-1.61□□□□□ -2.67
NEK3P51956 RNA5SP170-201ENST00000517150 101 ntBASIC-1.61□□□□□ -2.67
NEK3P51956 RNU6-696P-201ENST00000390834 107 ntBASIC-1.62□□□□□ -2.67
NEK3P51956 SNORD113-2-201ENST00000391082 72 ntBASIC-1.62□□□□□ -2.67
NEK3P51956 AC108019.1-201ENST00000512540 175 ntBASIC-1.62□□□□□ -2.67
NEK3P51956 RNU6-983P-201ENST00000516004 103 ntBASIC-1.62□□□□□ -2.67
NEK3P51956 MIR664A-201ENST00000626086 82 ntBASIC-1.62□□□□□ -2.67
NEK3P51956 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.63□□□□□ -2.67
NEK3P51956 RNU6-598P-201ENST00000364017 105 ntBASIC-1.63□□□□□ -2.67
NEK3P51956 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.63□□□□□ -2.67
NEK3P51956 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.63□□□□□ -2.67
NEK3P51956 RNU6-563P-201ENST00000364872 108 ntBASIC-1.63□□□□□ -2.67
NEK3P51956 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.63□□□□□ -2.67
NEK3P51956 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.63□□□□□ -2.67
NEK3P51956 RNU6-695P-201ENST00000391157 104 ntBASIC-1.63□□□□□ -2.67
NEK3P51956 MIR1285-2-201ENST00000408311 88 ntBASIC-1.63□□□□□ -2.67
NEK3P51956 U4.4-201ENST00000620626 117 ntBASIC-1.64□□□□□ -2.67
NEK3P51956 RNU6-895P-201ENST00000384125 103 ntBASIC-1.65□□□□□ -2.67
NEK3P51956 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.65□□□□□ -2.67
NEK3P51956 MIR4756-201ENST00000577874 78 ntBASIC-1.65□□□□□ -2.67
NEK3P51956 AC120024.2-201ENST00000576526 175 ntBASIC-1.66□□□□□ -2.68
NEK3P51956 U2.18-201ENST00000622185 84 ntBASIC-1.66□□□□□ -2.68
NEK3P51956 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.67□□□□□ -2.68
NEK3P51956 MIR4723-201ENST00000585070 81 ntBASIC-1.67□□□□□ -2.68
NEK3P51956 AC062037.1-201ENST00000605302 128 ntBASIC-1.67□□□□□ -2.68
NEK3P51956 MIR3123-201ENST00000583417 75 ntBASIC-1.68□□□□□ -2.68
NEK3P51956 RNU6-258P-201ENST00000390884 101 ntBASIC-1.69□□□□□ -2.68
NEK3P51956 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.7□□□□□ -2.68
NEK3P51956 MIR3202-2-201ENST00000635980 79 ntBASIC-1.7□□□□□ -2.68
NEK3P51956 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.71□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms