Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.34□□□□□ -2.46
NKX2-1P43699 MIR1245B-201ENST00000636115 69 ntBASIC-0.34□□□□□ -2.46
NKX2-1P43699 MIR1255A-201ENST00000408338 113 ntBASIC-0.35□□□□□ -2.47
NKX2-1P43699 RNA5SP225-201ENST00000410874 135 ntBASIC-0.35□□□□□ -2.47
NKX2-1P43699 SNORD63.1-201ENST00000516178 80 ntBASIC-0.35□□□□□ -2.47
NKX2-1P43699 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.35□□□□□ -2.47
NKX2-1P43699 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.35□□□□□ -2.47
NKX2-1P43699 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.36□□□□□ -2.47
NKX2-1P43699 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.36□□□□□ -2.47
NKX2-1P43699 RNU7-134P-201ENST00000458997 64 ntBASIC-0.36□□□□□ -2.47
NKX2-1P43699 RNA5SP180-201ENST00000516181 101 ntBASIC-0.36□□□□□ -2.47
NKX2-1P43699 RNU6-70P-201ENST00000516438 60 ntBASIC-0.36□□□□□ -2.47
NKX2-1P43699 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.37□□□□□ -2.47
NKX2-1P43699 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.37□□□□□ -2.47
NKX2-1P43699 SNORD114-3-201ENST00000364969 75 ntBASIC-0.37□□□□□ -2.47
NKX2-1P43699 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.37□□□□□ -2.47
NKX2-1P43699 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.37□□□□□ -2.47
NKX2-1P43699 RNU6-587P-201ENST00000391282 106 ntBASIC-0.37□□□□□ -2.47
NKX2-1P43699 MIR1285-2-201ENST00000408311 88 ntBASIC-0.37□□□□□ -2.47
NKX2-1P43699 SNORA13-201ENST00000458790 133 ntBASIC-0.37□□□□□ -2.47
NKX2-1P43699 RNU6-523P-201ENST00000516304 54 ntBASIC-0.37□□□□□ -2.47
NKX2-1P43699 RNU6-687P-201ENST00000516443 89 ntBASIC-0.37□□□□□ -2.47
NKX2-1P43699 RNU6-807P-201ENST00000516805 107 ntBASIC-0.37□□□□□ -2.47
NKX2-1P43699 MIR365A-201ENST00000362260 87 ntBASIC-0.38□□□□□ -2.47
NKX2-1P43699 RNA5SP192-201ENST00000364404 120 ntBASIC-0.38□□□□□ -2.47
NKX2-1P43699 SNORA41B-201ENST00000384785 128 ntBASIC-0.38□□□□□ -2.47
NKX2-1P43699 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.38□□□□□ -2.47
NKX2-1P43699 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.39□□□□□ -2.47
NKX2-1P43699 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.39□□□□□ -2.47
NKX2-1P43699 SNORD114-14-201ENST00000362723 75 ntBASIC-0.39□□□□□ -2.47
NKX2-1P43699 RNU6-598P-201ENST00000364017 105 ntBASIC-0.39□□□□□ -2.47
NKX2-1P43699 SNORA62.4-201ENST00000365504 151 ntBASIC-0.39□□□□□ -2.47
NKX2-1P43699 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.39□□□□□ -2.47
NKX2-1P43699 SNORD113-2-201ENST00000391082 72 ntBASIC-0.39□□□□□ -2.47
NKX2-1P43699 U2.18-201ENST00000622185 84 ntBASIC-0.39□□□□□ -2.47
NKX2-1P43699 SNORD74.6-201ENST00000364796 70 ntBASIC-0.4□□□□□ -2.47
NKX2-1P43699 RNU6-242P-201ENST00000384359 107 ntBASIC-0.4□□□□□ -2.47
NKX2-1P43699 MIR496-201ENST00000385226 102 ntBASIC-0.4□□□□□ -2.47
NKX2-1P43699 RPL35AP4-201ENST00000412007 102 ntBASIC-0.4□□□□□ -2.47
NKX2-1P43699 AL021921.1-201ENST00000442774 93 ntBASIC-0.4□□□□□ -2.47
NKX2-1P43699 RNU7-154P-201ENST00000516194 62 ntBASIC-0.4□□□□□ -2.47
NKX2-1P43699 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.4□□□□□ -2.47
NKX2-1P43699 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.4□□□□□ -2.47
NKX2-1P43699 MIR4441-201ENST00000582623 100 ntBASIC-0.4□□□□□ -2.47
NKX2-1P43699 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.41□□□□□ -2.48
NKX2-1P43699 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.41□□□□□ -2.48
NKX2-1P43699 RNU6-458P-201ENST00000384179 107 ntBASIC-0.41□□□□□ -2.48
NKX2-1P43699 RNU6-540P-201ENST00000384622 101 ntBASIC-0.41□□□□□ -2.48
NKX2-1P43699 MIR147A-201ENST00000385079 72 ntBASIC-0.41□□□□□ -2.48
NKX2-1P43699 SNORA26.2-201ENST00000390922 122 ntBASIC-0.41□□□□□ -2.48
NKX2-1P43699 U6.58-201ENST00000613107 107 ntBASIC-0.41□□□□□ -2.48
NKX2-1P43699 RNA5SP26-201ENST00000362406 119 ntBASIC-0.42□□□□□ -2.48
NKX2-1P43699 RNU6-668P-201ENST00000364180 107 ntBASIC-0.42□□□□□ -2.48
NKX2-1P43699 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.42□□□□□ -2.48
NKX2-1P43699 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.42□□□□□ -2.48
NKX2-1P43699 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.42□□□□□ -2.48
NKX2-1P43699 MIR1246-201ENST00000636535 73 ntBASIC-0.42□□□□□ -2.48
NKX2-1P43699 MIR382-201ENST00000637119 76 ntBASIC-0.42□□□□□ -2.48
NKX2-1P43699 MIR520D-201ENST00000385002 87 ntBASIC-0.43□□□□□ -2.48
NKX2-1P43699 MIR527-201ENST00000385244 85 ntBASIC-0.43□□□□□ -2.48
NKX2-1P43699 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.43□□□□□ -2.48
NKX2-1P43699 AC021146.6-201ENST00000514659 117 ntBASIC-0.43□□□□□ -2.48
NKX2-1P43699 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.43□□□□□ -2.48
NKX2-1P43699 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.43□□□□□ -2.48
NKX2-1P43699 RNU6-924P-201ENST00000362926 108 ntBASIC-0.44□□□□□ -2.48
NKX2-1P43699 RNU6-698P-201ENST00000363523 107 ntBASIC-0.44□□□□□ -2.48
NKX2-1P43699 RNU6-34P-201ENST00000364874 107 ntBASIC-0.44□□□□□ -2.48
NKX2-1P43699 MIR154-201ENST00000385243 84 ntBASIC-0.44□□□□□ -2.48
NKX2-1P43699 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
NKX2-1P43699 RNU6-857P-201ENST00000515893 110 ntBASIC-0.44□□□□□ -2.48
NKX2-1P43699 RNU6-732P-201ENST00000516033 103 ntBASIC-0.44□□□□□ -2.48
NKX2-1P43699 SNORD78.1-201ENST00000390866 65 ntBASIC-0.45□□□□□ -2.48
NKX2-1P43699 RNU6-258P-201ENST00000390884 101 ntBASIC-0.45□□□□□ -2.48
NKX2-1P43699 SNORA26.4-201ENST00000391188 123 ntBASIC-0.45□□□□□ -2.48
NKX2-1P43699 MIR8485-201ENST00000401372 91 ntBASIC-0.45□□□□□ -2.48
NKX2-1P43699 MIR4499-201ENST00000584834 69 ntBASIC-0.45□□□□□ -2.48
NKX2-1P43699 RNA5SP93-201ENST00000362525 114 ntBASIC-0.46□□□□□ -2.48
NKX2-1P43699 RNU6-974P-201ENST00000384099 108 ntBASIC-0.46□□□□□ -2.48
NKX2-1P43699 RNU6-24P-201ENST00000384440 107 ntBASIC-0.46□□□□□ -2.48
NKX2-1P43699 MIR579-201ENST00000385221 98 ntBASIC-0.46□□□□□ -2.48
NKX2-1P43699 MIR8053-201ENST00000613344 75 ntBASIC-0.46□□□□□ -2.48
NKX2-1P43699 MIR198-201ENST00000637333 62 ntBASIC-0.46□□□□□ -2.48
NKX2-1P43699 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.47□□□□□ -2.48
NKX2-1P43699 MIR507-201ENST00000385234 94 ntBASIC-0.47□□□□□ -2.48
NKX2-1P43699 MIR548Q-201ENST00000408404 100 ntBASIC-0.47□□□□□ -2.48
NKX2-1P43699 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.47□□□□□ -2.48
NKX2-1P43699 MTND4LP1-201ENST00000446263 157 ntBASIC-0.47□□□□□ -2.48
NKX2-1P43699 U7.4-201ENST00000614961 63 ntBASIC-0.47□□□□□ -2.48
NKX2-1P43699 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.48□□□□□ -2.49
NKX2-1P43699 SNORD1B-201ENST00000363091 84 ntBASIC-0.48□□□□□ -2.49
NKX2-1P43699 SNORD115-33-201ENST00000363723 82 ntBASIC-0.48□□□□□ -2.49
NKX2-1P43699 RNU6-895P-201ENST00000384125 103 ntBASIC-0.48□□□□□ -2.49
NKX2-1P43699 SNORD83B-201ENST00000386745 93 ntBASIC-0.48□□□□□ -2.49
NKX2-1P43699 RNU6-630P-201ENST00000391258 106 ntBASIC-0.48□□□□□ -2.49
NKX2-1P43699 MIR1302-4-201ENST00000408701 150 ntBASIC-0.48□□□□□ -2.49
NKX2-1P43699 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.49□□□□□ -2.49
NKX2-1P43699 RNU6-608P-201ENST00000383927 104 ntBASIC-0.49□□□□□ -2.49
NKX2-1P43699 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.49□□□□□ -2.49
NKX2-1P43699 RNU6-279P-201ENST00000391297 101 ntBASIC-0.49□□□□□ -2.49
NKX2-1P43699 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms