Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 SNORD116-6-201ENST00000384711 96 ntBASIC-6.03□□□□□ -3.37
VCANP13611 Y_RNA.607-201ENST00000410597 98 ntBASIC-6.03□□□□□ -3.37
VCANP13611 RNU6-130P-201ENST00000411112 103 ntBASIC-6.03□□□□□ -3.37
VCANP13611 RNU6-264P-201ENST00000517134 104 ntBASIC-6.03□□□□□ -3.37
VCANP13611 RNU6-497P-201ENST00000365316 104 ntBASIC-6.04□□□□□ -3.38
VCANP13611 Y_RNA.472-201ENST00000384322 102 ntBASIC-6.04□□□□□ -3.38
VCANP13611 AC078883.4-201ENST00000623218 367 ntBASIC-6.05□□□□□ -3.38
VCANP13611 Y_RNA.337-201ENST00000365312 102 ntBASIC-6.06□□□□□ -3.38
VCANP13611 Y_RNA.314-201ENST00000365114 102 ntBASIC-6.06□□□□□ -3.38
VCANP13611 RNU6-413P-201ENST00000384115 107 ntBASIC-6.06□□□□□ -3.38
VCANP13611 Y_RNA.485-201ENST00000384395 102 ntBASIC-6.06□□□□□ -3.38
VCANP13611 RNU6-1289P-201ENST00000384431 106 ntBASIC-6.06□□□□□ -3.38
VCANP13611 SNORA40.4-201ENST00000390971 128 ntBASIC-6.06□□□□□ -3.38
VCANP13611 MIR548F3-201ENST00000408509 87 ntBASIC-6.06□□□□□ -3.38
VCANP13611 MIR3134-201ENST00000579433 74 ntBASIC-6.06□□□□□ -3.38
VCANP13611 SNORD37.2-201ENST00000391075 66 ntBASIC-6.07□□□□□ -3.38
VCANP13611 Y_RNA.611-201ENST00000410682 108 ntBASIC-6.07□□□□□ -3.38
VCANP13611 RNU6-753P-201ENST00000363926 107 ntBASIC-6.07□□□□□ -3.38
VCANP13611 RNU6-593P-201ENST00000364716 112 ntBASIC-6.08□□□□□ -3.38
VCANP13611 Y_RNA.530-201ENST00000384587 101 ntBASIC-6.08□□□□□ -3.38
VCANP13611 SNORD81.2-201ENST00000365153 76 ntBASIC-6.09□□□□□ -3.38
VCANP13611 Y_RNA.599-201ENST00000410489 109 ntBASIC-6.09□□□□□ -3.38
VCANP13611 Y_RNA.615-201ENST00000410769 117 ntBASIC-6.09□□□□□ -3.38
VCANP13611 RNU6-373P-201ENST00000411247 98 ntBASIC-6.1□□□□□ -3.39
VCANP13611 RNU6-1257P-201ENST00000384625 110 ntBASIC-6.1□□□□□ -3.39
VCANP13611 RNU6-566P-201ENST00000516790 107 ntBASIC-6.1□□□□□ -3.39
VCANP13611 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-6.11□□□□□ -3.39
VCANP13611 Y_RNA.84-201ENST00000363011 104 ntBASIC-6.12□□□□□ -3.39
VCANP13611 MIR514A2-201ENST00000385131 88 ntBASIC-6.12□□□□□ -3.39
VCANP13611 MIR514A3-201ENST00000385132 88 ntBASIC-6.12□□□□□ -3.39
VCANP13611 RNU6-930P-201ENST00000390938 100 ntBASIC-6.12□□□□□ -3.39
VCANP13611 MIR1302-5-201ENST00000408164 150 ntBASIC-6.12□□□□□ -3.39
VCANP13611 Y_RNA.44-201ENST00000362676 108 ntBASIC-6.13□□□□□ -3.39
VCANP13611 Y_RNA.788-201ENST00000622394 112 ntBASIC-6.13□□□□□ -3.39
VCANP13611 Y_RNA.262-201ENST00000364641 102 ntBASIC-6.14□□□□□ -3.39
VCANP13611 Y_RNA.445-201ENST00000384168 102 ntBASIC-6.14□□□□□ -3.39
VCANP13611 RNU6-829P-201ENST00000363700 112 ntBASIC-6.15□□□□□ -3.39
VCANP13611 SNORD30.1-201ENST00000391309 70 ntBASIC-6.16□□□□□ -3.4
VCANP13611 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-6.16□□□□□ -3.4
VCANP13611 MIR3913-1-201ENST00000577744 102 ntBASIC-6.16□□□□□ -3.4
VCANP13611 Y_RNA.414-201ENST00000384011 101 ntBASIC-6.17□□□□□ -3.4
VCANP13611 MIR548BB-201ENST00000626714 66 ntBASIC-6.17□□□□□ -3.4
VCANP13611 RNU6-1227P-201ENST00000383981 107 ntBASIC-6.17□□□□□ -3.4
VCANP13611 AC006927.3-201ENST00000638789 384 ntBASIC-6.17□□□□□ -3.4
VCANP13611 Y_RNA.93-201ENST00000363066 109 ntBASIC-6.18□□□□□ -3.4
VCANP13611 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-6.18□□□□□ -3.4
VCANP13611 MTND3P10-201ENST00000450967 341 ntBASIC-6.18□□□□□ -3.4
VCANP13611 RNU6-219P-201ENST00000364728 107 ntBASIC-6.18□□□□□ -3.4
VCANP13611 AC099799.1-201ENST00000439809 192 ntBASIC-6.18□□□□□ -3.4
VCANP13611 RPS29P30-201ENST00000600975 111 ntBASIC-6.19□□□□□ -3.4
VCANP13611 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-6.19□□□□□ -3.4
VCANP13611 RNU6-1061P-201ENST00000516530 99 ntBASIC-6.2□□□□□ -3.4
VCANP13611 MIR4272-201ENST00000635924 64 ntBASIC-6.2□□□□□ -3.4
VCANP13611 SNORD116.1-201ENST00000365628 92 ntBASIC-6.2□□□□□ -3.4
VCANP13611 SNORD116-12-201ENST00000384468 92 ntBASIC-6.2□□□□□ -3.4
VCANP13611 AC044792.1-201ENST00000593294 196 ntBASIC-6.21□□□□□ -3.4
VCANP13611 RNU6-460P-201ENST00000391158 108 ntBASIC-6.22□□□□□ -3.4
VCANP13611 SNORD42A-201ENST00000459584 64 ntBASIC-6.22□□□□□ -3.4
VCANP13611 SNORA19-201ENST00000384737 128 ntBASIC-6.22□□□□□ -3.41
VCANP13611 RNU6-673P-201ENST00000365084 104 ntBASIC-6.23□□□□□ -3.41
VCANP13611 SNORA40.3-201ENST00000390964 122 ntBASIC-6.23□□□□□ -3.41
VCANP13611 Y_RNA.818-201ENST00000618813 71 ntBASIC-6.23□□□□□ -3.41
VCANP13611 Y_RNA.201-201ENST00000364052 96 ntBASIC-6.24□□□□□ -3.41
VCANP13611 RNU7-121P-201ENST00000516604 62 ntBASIC-6.24□□□□□ -3.41
VCANP13611 RNU6-463P-201ENST00000384340 107 ntBASIC-6.24□□□□□ -3.41
VCANP13611 RNU6-931P-201ENST00000363850 107 ntBASIC-6.25□□□□□ -3.41
VCANP13611 SNORD58C-201ENST00000365223 64 ntBASIC-6.25□□□□□ -3.41
VCANP13611 DNAJC19P2-201ENST00000593340 302 ntBASIC-6.26□□□□□ -3.41
VCANP13611 AL158147.1-201ENST00000443970 75 ntBASIC-6.26□□□□□ -3.41
VCANP13611 Y_RNA.290-201ENST00000364879 114 ntBASIC-6.28□□□□□ -3.42
VCANP13611 MIR2052-201ENST00000636055 55 ntBASIC-6.28□□□□□ -3.42
VCANP13611 Y_RNA.107-201ENST00000363190 121 ntBASIC-6.29□□□□□ -3.42
VCANP13611 U7.4-201ENST00000614961 63 ntBASIC-6.29□□□□□ -3.42
VCANP13611 Y_RNA.535-201ENST00000384612 99 ntBASIC-6.29□□□□□ -3.42
VCANP13611 MIR590-201ENST00000385008 97 ntBASIC-6.29□□□□□ -3.42
VCANP13611 SNORD127-201ENST00000458892 86 ntBASIC-6.3□□□□□ -3.42
VCANP13611 AL121895.2-201ENST00000619558 447 ntBASIC-6.3□□□□□ -3.42
VCANP13611 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-6.32□□□□□ -3.42
VCANP13611 Y_RNA.154-201ENST00000363624 102 ntBASIC-6.33□□□□□ -3.42
VCANP13611 Y_RNA.16-201ENST00000362421 102 ntBASIC-6.35□□□□□ -3.43
VCANP13611 RNU6-915P-201ENST00000364943 103 ntBASIC-6.35□□□□□ -3.43
VCANP13611 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-6.35□□□□□ -3.43
VCANP13611 MIR548F5-201ENST00000408421 86 ntBASIC-6.35□□□□□ -3.43
VCANP13611 Y_RNA.94-201ENST00000363068 106 ntBASIC-6.37□□□□□ -3.43
VCANP13611 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-6.37□□□□□ -3.43
VCANP13611 SNORA40.15-201ENST00000516884 107 ntBASIC-6.37□□□□□ -3.43
VCANP13611 RNU6-109P-201ENST00000516364 107 ntBASIC-6.38□□□□□ -3.43
VCANP13611 RNU6-184P-201ENST00000516514 107 ntBASIC-6.38□□□□□ -3.43
VCANP13611 Y_RNA.273-201ENST00000364703 102 ntBASIC-6.38□□□□□ -3.43
VCANP13611 RNU6-239P-201ENST00000390990 99 ntBASIC-6.38□□□□□ -3.43
VCANP13611 AP001340.1-201ENST00000624405 217 ntBASIC-6.38□□□□□ -3.43
VCANP13611 SNORA40.14-201ENST00000516543 86 ntBASIC-6.38□□□□□ -3.43
VCANP13611 AC104985.2-201ENST00000620598 500 ntBASIC-6.39□□□□□ -3.43
VCANP13611 Y_RNA.545-201ENST00000384652 105 ntBASIC-6.4□□□□□ -3.43
VCANP13611 RNU6-871P-201ENST00000516122 100 ntBASIC-6.4□□□□□ -3.43
VCANP13611 SNORA81.3-201ENST00000517283 198 ntBASIC-6.4□□□□□ -3.43
VCANP13611 U6.111-201ENST00000636093 83 ntBASIC-6.41□□□□□ -3.44
VCANP13611 RNU6-471P-201ENST00000383944 106 ntBASIC-6.41□□□□□ -3.44
VCANP13611 U7.2-201ENST00000607576 63 ntBASIC-6.41□□□□□ -3.44
VCANP13611 Y_RNA.292-201ENST00000364904 97 ntBASIC-6.42□□□□□ -3.44
Retrieved 100 of 98,524 protein–RNA pairs in 261.4 ms