Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SNORD63.2-201ENST00000516303 64 ntBASIC0.52□□□□□ -2.33
THBS1P07996 RNU6-1238P-201ENST00000517215 102 ntBASIC0.52□□□□□ -2.33
THBS1P07996 MIR4315-1-201ENST00000636800 73 ntBASIC0.51□□□□□ -2.33
THBS1P07996 MIR4315-2-201ENST00000640925 73 ntBASIC0.51□□□□□ -2.33
THBS1P07996 MIR6507-201ENST00000613630 70 ntBASIC0.5□□□□□ -2.33
THBS1P07996 MTRNR2L9-201ENST00000622562 75 ntBASIC0.5□□□□□ -2.33
THBS1P07996 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
THBS1P07996 RNU6-1233P-201ENST00000362922 102 ntBASIC0.48□□□□□ -2.33
THBS1P07996 MIR29B1-201ENST00000385015 81 ntBASIC0.47□□□□□ -2.33
THBS1P07996 MIR548Q-201ENST00000408404 100 ntBASIC0.46□□□□□ -2.34
THBS1P07996 MIR1468-201ENST00000410600 86 ntBASIC0.46□□□□□ -2.34
THBS1P07996 SNORA42.1-201ENST00000363515 137 ntBASIC0.45□□□□□ -2.34
THBS1P07996 RNU6-742P-201ENST00000365289 107 ntBASIC0.45□□□□□ -2.34
THBS1P07996 MIR548H2-201ENST00000408874 88 ntBASIC0.45□□□□□ -2.34
THBS1P07996 RNU7-159P-201ENST00000459284 62 ntBASIC0.45□□□□□ -2.34
THBS1P07996 RNA5SP285-201ENST00000516619 119 ntBASIC0.45□□□□□ -2.34
THBS1P07996 SNORA62.5-201ENST00000516634 120 ntBASIC0.45□□□□□ -2.34
THBS1P07996 MIR5704-201ENST00000584029 77 ntBASIC0.45□□□□□ -2.34
THBS1P07996 RNU6-986P-201ENST00000363133 102 ntBASIC0.44□□□□□ -2.34
THBS1P07996 MIR124-2-201ENST00000385081 109 ntBASIC0.44□□□□□ -2.34
THBS1P07996 Y_RNA.699-201ENST00000516803 93 ntBASIC0.44□□□□□ -2.34
THBS1P07996 MIR2909-201ENST00000617113 69 ntBASIC0.44□□□□□ -2.34
THBS1P07996 RNU6-822P-201ENST00000362707 106 ntBASIC0.43□□□□□ -2.34
THBS1P07996 RNU6-974P-201ENST00000384099 108 ntBASIC0.43□□□□□ -2.34
THBS1P07996 RNU6-1250P-201ENST00000391218 107 ntBASIC0.43□□□□□ -2.34
THBS1P07996 SNORA27.2-201ENST00000363365 126 ntBASIC0.42□□□□□ -2.34
THBS1P07996 RNU6-530P-201ENST00000391180 107 ntBASIC0.42□□□□□ -2.34
THBS1P07996 RNU6-721P-201ENST00000410155 105 ntBASIC0.42□□□□□ -2.34
THBS1P07996 RNU7-165P-201ENST00000458864 60 ntBASIC0.42□□□□□ -2.34
THBS1P07996 SNORD56B-201ENST00000384713 71 ntBASIC0.41□□□□□ -2.34
THBS1P07996 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
THBS1P07996 VTRNA1-3-201ENST00000365645 89 ntBASIC0.4□□□□□ -2.35
THBS1P07996 AC244250.2-201ENST00000418731 148 ntBASIC0.4□□□□□ -2.35
THBS1P07996 MIR4514-201ENST00000581410 57 ntBASIC0.4□□□□□ -2.35
THBS1P07996 MIR8068-201ENST00000618032 68 ntBASIC0.4□□□□□ -2.35
THBS1P07996 SNORD74.6-201ENST00000364796 70 ntBASIC0.39□□□□□ -2.35
THBS1P07996 RNU6-46P-201ENST00000383860 107 ntBASIC0.39□□□□□ -2.35
THBS1P07996 MIR593-201ENST00000384856 100 ntBASIC0.39□□□□□ -2.35
THBS1P07996 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.39□□□□□ -2.35
THBS1P07996 RNA5SP63-201ENST00000391225 112 ntBASIC0.38□□□□□ -2.35
THBS1P07996 AC114755.3-201ENST00000481111 251 ntBASIC0.38□□□□□ -2.35
THBS1P07996 MIR145-201ENST00000384967 88 ntBASIC0.37□□□□□ -2.35
THBS1P07996 AL627230.5-201ENST00000619807 58 ntBASIC0.37□□□□□ -2.35
THBS1P07996 RNU6-1008P-201ENST00000384160 104 ntBASIC0.36□□□□□ -2.35
THBS1P07996 RNU6-258P-201ENST00000390884 101 ntBASIC0.36□□□□□ -2.35
THBS1P07996 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
THBS1P07996 SNORD19-201ENST00000391191 68 ntBASIC0.34□□□□□ -2.36
THBS1P07996 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
THBS1P07996 MIR4636-201ENST00000582271 80 ntBASIC0.34□□□□□ -2.36
THBS1P07996 AC023932.2-201ENST00000603176 175 ntBASIC0.34□□□□□ -2.36
THBS1P07996 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.34□□□□□ -2.36
THBS1P07996 MIR520D-201ENST00000385002 87 ntBASIC0.33□□□□□ -2.36
THBS1P07996 AL445193.1-201ENST00000441183 141 ntBASIC0.33□□□□□ -2.36
THBS1P07996 AL353691.2-201ENST00000443795 59 ntBASIC0.33□□□□□ -2.36
THBS1P07996 AC104692.1-201ENST00000472406 90 ntBASIC0.33□□□□□ -2.36
THBS1P07996 RNA5SP169-201ENST00000517268 117 ntBASIC0.33□□□□□ -2.36
THBS1P07996 RNA5SP214-201ENST00000363378 118 ntBASIC0.32□□□□□ -2.36
THBS1P07996 AP002795.1-201ENST00000534879 84 ntBASIC0.32□□□□□ -2.36
THBS1P07996 MIR4280-201ENST00000582178 76 ntBASIC0.32□□□□□ -2.36
THBS1P07996 MIR6851-201ENST00000617060 67 ntBASIC0.32□□□□□ -2.36
THBS1P07996 MIR4317-201ENST00000637586 65 ntBASIC0.32□□□□□ -2.36
THBS1P07996 MIR6759-201ENST00000638110 65 ntBASIC0.32□□□□□ -2.36
THBS1P07996 SNORD115-33-201ENST00000363723 82 ntBASIC0.31□□□□□ -2.36
THBS1P07996 SNORD49B-201ENST00000365172 72 ntBASIC0.31□□□□□ -2.36
THBS1P07996 SNORA26.4-201ENST00000391188 123 ntBASIC0.31□□□□□ -2.36
THBS1P07996 MIR548H4-201ENST00000408689 111 ntBASIC0.31□□□□□ -2.36
THBS1P07996 SNORD18.2-201ENST00000459604 70 ntBASIC0.31□□□□□ -2.36
THBS1P07996 MIR655-201ENST00000362159 97 ntBASIC0.3□□□□□ -2.36
THBS1P07996 MIR5589-201ENST00000579442 60 ntBASIC0.3□□□□□ -2.36
THBS1P07996 U6.103-201ENST00000637085 61 ntBASIC0.3□□□□□ -2.36
THBS1P07996 RNU6-724P-201ENST00000390958 105 ntBASIC0.29□□□□□ -2.36
THBS1P07996 RNY1P9-201ENST00000532431 109 ntBASIC0.29□□□□□ -2.36
THBS1P07996 MIR5683-201ENST00000636514 76 ntBASIC0.29□□□□□ -2.36
THBS1P07996 RNA5SP66-201ENST00000517178 101 ntBASIC0.28□□□□□ -2.36
THBS1P07996 MIR4263-201ENST00000584745 83 ntBASIC0.28□□□□□ -2.36
THBS1P07996 MIR4426-201ENST00000640330 63 ntBASIC0.28□□□□□ -2.36
THBS1P07996 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.27□□□□□ -2.37
THBS1P07996 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.27□□□□□ -2.37
THBS1P07996 MIR4802-201ENST00000581881 80 ntBASIC0.27□□□□□ -2.37
THBS1P07996 SNORD114-9-201ENST00000364370 72 ntBASIC0.26□□□□□ -2.37
THBS1P07996 RNU6-361P-201ENST00000364454 107 ntBASIC0.26□□□□□ -2.37
THBS1P07996 MIR518B-201ENST00000385127 83 ntBASIC0.26□□□□□ -2.37
THBS1P07996 SNORA13-201ENST00000458790 133 ntBASIC0.26□□□□□ -2.37
THBS1P07996 snoU13.19-201ENST00000459148 104 ntBASIC0.26□□□□□ -2.37
THBS1P07996 RNU6-176P-201ENST00000517196 105 ntBASIC0.26□□□□□ -2.37
THBS1P07996 AC093726.3-201ENST00000637588 150 ntBASIC0.26□□□□□ -2.37
THBS1P07996 RNU6-30P-201ENST00000384561 107 ntBASIC0.25□□□□□ -2.37
THBS1P07996 RNU6-59P-201ENST00000384787 107 ntBASIC0.25□□□□□ -2.37
THBS1P07996 MIR6718-201ENST00000616153 80 ntBASIC0.25□□□□□ -2.37
THBS1P07996 RNU6-1047P-201ENST00000364418 107 ntBASIC0.24□□□□□ -2.37
THBS1P07996 SNORD114-5-201ENST00000362928 70 ntBASIC0.23□□□□□ -2.37
THBS1P07996 AC138207.3-201ENST00000585289 166 ntBASIC0.23□□□□□ -2.37
THBS1P07996 SNORD38.3-201ENST00000516599 73 ntBASIC0.22□□□□□ -2.37
THBS1P07996 MIR1295B-201ENST00000636144 60 ntBASIC0.22□□□□□ -2.37
THBS1P07996 RNU6-608P-201ENST00000383927 104 ntBASIC0.21□□□□□ -2.38
THBS1P07996 RNU6-1326P-201ENST00000391262 107 ntBASIC0.21□□□□□ -2.38
THBS1P07996 RNY3P8-201ENST00000411366 126 ntBASIC0.21□□□□□ -2.38
THBS1P07996 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
THBS1P07996 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
THBS1P07996 Y_RNA.185-201ENST00000363894 100 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 227.9 ms