Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SNORA27.2-201ENST00000363365 126 ntBASIC-2.74□□□□□ -2.85
HLA-DQB2P05538 RNU6-463P-201ENST00000384340 107 ntBASIC-2.74□□□□□ -2.85
HLA-DQB2P05538 RNU6-106P-201ENST00000384405 107 ntBASIC-2.74□□□□□ -2.85
HLA-DQB2P05538 MIR4484-201ENST00000582855 83 ntBASIC-2.74□□□□□ -2.85
HLA-DQB2P05538 RNA5SP173-201ENST00000364857 136 ntBASIC-2.75□□□□□ -2.85
HLA-DQB2P05538 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.75□□□□□ -2.85
HLA-DQB2P05538 MIR579-201ENST00000385221 98 ntBASIC-2.75□□□□□ -2.85
HLA-DQB2P05538 MIR496-201ENST00000385226 102 ntBASIC-2.75□□□□□ -2.85
HLA-DQB2P05538 AC005520.4-201ENST00000604337 90 ntBASIC-2.75□□□□□ -2.85
HLA-DQB2P05538 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.76□□□□□ -2.85
HLA-DQB2P05538 RNU6-669P-201ENST00000365575 107 ntBASIC-2.76□□□□□ -2.85
HLA-DQB2P05538 RNY4P18-201ENST00000391107 89 ntBASIC-2.76□□□□□ -2.85
HLA-DQB2P05538 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.76□□□□□ -2.85
HLA-DQB2P05538 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.76□□□□□ -2.85
HLA-DQB2P05538 AP001094.1-201ENST00000579805 193 ntBASIC-2.77□□□□□ -2.85
HLA-DQB2P05538 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.78□□□□□ -2.85
HLA-DQB2P05538 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.78□□□□□ -2.85
HLA-DQB2P05538 SNORD116-14-201ENST00000383894 92 ntBASIC-2.78□□□□□ -2.85
HLA-DQB2P05538 SNORD116-17-201ENST00000383929 92 ntBASIC-2.78□□□□□ -2.85
HLA-DQB2P05538 SNORD116-15-201ENST00000384445 92 ntBASIC-2.78□□□□□ -2.85
HLA-DQB2P05538 SNORD116-19-201ENST00000384729 92 ntBASIC-2.78□□□□□ -2.85
HLA-DQB2P05538 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.78□□□□□ -2.85
HLA-DQB2P05538 MIR3139-201ENST00000579145 76 ntBASIC-2.78□□□□□ -2.85
HLA-DQB2P05538 SNORD113.1-201ENST00000363280 73 ntBASIC-2.79□□□□□ -2.86
HLA-DQB2P05538 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.79□□□□□ -2.86
HLA-DQB2P05538 RNY3P8-201ENST00000411366 126 ntBASIC-2.79□□□□□ -2.86
HLA-DQB2P05538 RNU6-194P-201ENST00000363862 105 ntBASIC-2.8□□□□□ -2.86
HLA-DQB2P05538 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.8□□□□□ -2.86
HLA-DQB2P05538 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.8□□□□□ -2.86
HLA-DQB2P05538 MT-TG-201ENST00000387429 68 ntBASIC-2.8□□□□□ -2.86
HLA-DQB2P05538 MIR8053-201ENST00000613344 75 ntBASIC-2.8□□□□□ -2.86
HLA-DQB2P05538 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.81□□□□□ -2.86
HLA-DQB2P05538 SNORD115-31-201ENST00000365318 82 ntBASIC-2.81□□□□□ -2.86
HLA-DQB2P05538 SNORD116-22-201ENST00000384430 92 ntBASIC-2.81□□□□□ -2.86
HLA-DQB2P05538 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.81□□□□□ -2.86
HLA-DQB2P05538 RNU6-172P-201ENST00000411000 93 ntBASIC-2.81□□□□□ -2.86
HLA-DQB2P05538 SNORD54-201ENST00000459159 67 ntBASIC-2.81□□□□□ -2.86
HLA-DQB2P05538 snoU13.10-201ENST00000459301 103 ntBASIC-2.81□□□□□ -2.86
HLA-DQB2P05538 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.82□□□□□ -2.86
HLA-DQB2P05538 RNU6-907P-201ENST00000390924 102 ntBASIC-2.82□□□□□ -2.86
HLA-DQB2P05538 RNU6-129P-201ENST00000391022 107 ntBASIC-2.82□□□□□ -2.86
HLA-DQB2P05538 MIR548BB-201ENST00000626714 66 ntBASIC-2.82□□□□□ -2.86
HLA-DQB2P05538 RNY1P5-201ENST00000383890 115 ntBASIC-2.83□□□□□ -2.86
HLA-DQB2P05538 SNORD45A-201ENST00000384512 84 ntBASIC-2.83□□□□□ -2.86
HLA-DQB2P05538 RNU6-267P-201ENST00000516714 103 ntBASIC-2.83□□□□□ -2.86
HLA-DQB2P05538 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.83□□□□□ -2.86
HLA-DQB2P05538 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.83□□□□□ -2.86
HLA-DQB2P05538 MIR7978-201ENST00000636158 59 ntBASIC-2.83□□□□□ -2.86
HLA-DQB2P05538 MIR1297-201ENST00000637311 77 ntBASIC-2.83□□□□□ -2.86
HLA-DQB2P05538 RNU6-219P-201ENST00000364728 107 ntBASIC-2.84□□□□□ -2.86
HLA-DQB2P05538 RNU6-497P-201ENST00000365316 104 ntBASIC-2.84□□□□□ -2.86
HLA-DQB2P05538 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.84□□□□□ -2.86
HLA-DQB2P05538 RNU6-402P-201ENST00000410678 103 ntBASIC-2.84□□□□□ -2.86
HLA-DQB2P05538 MIR548W-201ENST00000581970 74 ntBASIC-2.84□□□□□ -2.86
HLA-DQB2P05538 RNU6-523P-201ENST00000516304 54 ntBASIC-2.85□□□□□ -2.87
HLA-DQB2P05538 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.86□□□□□ -2.87
HLA-DQB2P05538 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.86□□□□□ -2.87
HLA-DQB2P05538 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.86□□□□□ -2.87
HLA-DQB2P05538 RNU6-255P-201ENST00000516957 105 ntBASIC-2.86□□□□□ -2.87
HLA-DQB2P05538 MIR2052-201ENST00000636055 55 ntBASIC-2.86□□□□□ -2.87
HLA-DQB2P05538 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.86□□□□□ -2.87
HLA-DQB2P05538 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.87□□□□□ -2.87
HLA-DQB2P05538 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.87□□□□□ -2.87
HLA-DQB2P05538 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.87□□□□□ -2.87
HLA-DQB2P05538 SNORA63.4-201ENST00000362763 126 ntBASIC-2.88□□□□□ -2.87
HLA-DQB2P05538 RNU6-974P-201ENST00000384099 108 ntBASIC-2.89□□□□□ -2.87
HLA-DQB2P05538 MIR125B1-201ENST00000385236 88 ntBASIC-2.89□□□□□ -2.87
HLA-DQB2P05538 RNU6-380P-201ENST00000410207 107 ntBASIC-2.89□□□□□ -2.87
HLA-DQB2P05538 SNORD18C-201ENST00000362704 69 ntBASIC-2.9□□□□□ -2.87
HLA-DQB2P05538 RNU6-755P-201ENST00000364400 103 ntBASIC-2.9□□□□□ -2.87
HLA-DQB2P05538 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.9□□□□□ -2.87
HLA-DQB2P05538 MT-TM-201ENST00000387377 68 ntBASIC-2.9□□□□□ -2.87
HLA-DQB2P05538 AP001318.4-201ENST00000616637 121 ntBASIC-2.9□□□□□ -2.87
HLA-DQB2P05538 MIR664A-201ENST00000626086 82 ntBASIC-2.9□□□□□ -2.87
HLA-DQB2P05538 MIR466-201ENST00000580653 84 ntBASIC-2.92□□□□□ -2.88
HLA-DQB2P05538 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.92□□□□□ -2.88
HLA-DQB2P05538 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.93□□□□□ -2.88
HLA-DQB2P05538 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.93□□□□□ -2.88
HLA-DQB2P05538 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.93□□□□□ -2.88
HLA-DQB2P05538 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.94□□□□□ -2.88
HLA-DQB2P05538 MALAT1.1-201ENST00000618249 95 ntBASIC-2.95□□□□□ -2.88
HLA-DQB2P05538 RNU6-520P-201ENST00000384717 104 ntBASIC-2.96□□□□□ -2.88
HLA-DQB2P05538 RNU6-694P-201ENST00000364071 147 ntBASIC-2.97□□□□□ -2.88
HLA-DQB2P05538 RNU6-789P-201ENST00000517105 102 ntBASIC-2.97□□□□□ -2.88
HLA-DQB2P05538 SNORD60-201ENST00000383903 83 ntBASIC-2.98□□□□□ -2.89
HLA-DQB2P05538 RNU6-649P-201ENST00000384463 107 ntBASIC-2.98□□□□□ -2.89
HLA-DQB2P05538 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.98□□□□□ -2.89
HLA-DQB2P05538 AC006160.2-201ENST00000637708 154 ntBASIC-2.98□□□□□ -2.89
HLA-DQB2P05538 MIR202-201ENST00000362219 110 ntBASIC-2.99□□□□□ -2.89
HLA-DQB2P05538 MIR4748-201ENST00000578076 82 ntBASIC-2.99□□□□□ -2.89
HLA-DQB2P05538 FTX_4.1-201ENST00000616291 147 ntBASIC-2.99□□□□□ -2.89
HLA-DQB2P05538 RNY1P1-201ENST00000364372 112 ntBASIC-3□□□□□ -2.89
HLA-DQB2P05538 MIR581-201ENST00000384895 96 ntBASIC-3□□□□□ -2.89
HLA-DQB2P05538 AC097484.2-201ENST00000509147 251 ntBASIC-3□□□□□ -2.89
HLA-DQB2P05538 MIR450A1-201ENST00000362262 91 ntBASIC-3.01□□□□□ -2.89
HLA-DQB2P05538 AL031737.1-201ENST00000450125 223 ntBASIC-3.01□□□□□ -2.89
HLA-DQB2P05538 RNU6-589P-201ENST00000516485 107 ntBASIC-3.01□□□□□ -2.89
HLA-DQB2P05538 RNU7-160P-201ENST00000516660 62 ntBASIC-3.02□□□□□ -2.89
HLA-DQB2P05538 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.03□□□□□ -2.89
HLA-DQB2P05538 RNU6-895P-201ENST00000384125 103 ntBASIC-3.03□□□□□ -2.89
Retrieved 100 of 98,524 protein–RNA pairs in 224.3 ms