Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 RNU6-995P-201ENST00000391244 107 ntBASIC0.28□□□□□ -2.37
COL3A1P02461 AC096531.1-201ENST00000419107 107 ntBASIC0.28□□□□□ -2.37
COL3A1P02461 MIR4490-201ENST00000582647 84 ntBASIC0.28□□□□□ -2.37
COL3A1P02461 MIR4743-201ENST00000584576 69 ntBASIC0.28□□□□□ -2.37
COL3A1P02461 RNU6-455P-201ENST00000384681 107 ntBASIC0.27□□□□□ -2.37
COL3A1P02461 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
COL3A1P02461 RNU4-88P-201ENST00000411220 86 ntBASIC0.27□□□□□ -2.37
COL3A1P02461 Y_RNA.698-201ENST00000516798 118 ntBASIC0.27□□□□□ -2.37
COL3A1P02461 RNU6-419P-201ENST00000517030 63 ntBASIC0.27□□□□□ -2.37
COL3A1P02461 U7.5-201ENST00000517224 61 ntBASIC0.27□□□□□ -2.37
COL3A1P02461 AL445584.3-201ENST00000617173 78 ntBASIC0.27□□□□□ -2.37
COL3A1P02461 MIR6888-201ENST00000621977 67 ntBASIC0.27□□□□□ -2.37
COL3A1P02461 MIR148A-201ENST00000362215 68 ntBASIC0.26□□□□□ -2.37
COL3A1P02461 AP001180.6-201ENST00000584918 159 ntBASIC0.26□□□□□ -2.37
COL3A1P02461 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.26□□□□□ -2.37
COL3A1P02461 MIR6507-201ENST00000613630 70 ntBASIC0.26□□□□□ -2.37
COL3A1P02461 U2.18-201ENST00000622185 84 ntBASIC0.26□□□□□ -2.37
COL3A1P02461 MIR579-201ENST00000385221 98 ntBASIC0.25□□□□□ -2.37
COL3A1P02461 RNY1P9-201ENST00000532431 109 ntBASIC0.25□□□□□ -2.37
COL3A1P02461 SNORD114-31-201ENST00000363219 75 ntBASIC0.24□□□□□ -2.37
COL3A1P02461 RNU6-901P-201ENST00000384593 106 ntBASIC0.24□□□□□ -2.37
COL3A1P02461 MIR593-201ENST00000384856 100 ntBASIC0.24□□□□□ -2.37
COL3A1P02461 MIR548H2-201ENST00000408874 88 ntBASIC0.24□□□□□ -2.37
COL3A1P02461 MIR4464-201ENST00000580818 92 ntBASIC0.24□□□□□ -2.37
COL3A1P02461 MIR1207-201ENST00000408249 87 ntBASIC0.23□□□□□ -2.37
COL3A1P02461 Y_RNA.613-201ENST00000410726 97 ntBASIC0.23□□□□□ -2.37
COL3A1P02461 RNU7-88P-201ENST00000458752 63 ntBASIC0.23□□□□□ -2.37
COL3A1P02461 SNORD63.1-201ENST00000516178 80 ntBASIC0.23□□□□□ -2.37
COL3A1P02461 RNU6-1206P-201ENST00000516339 103 ntBASIC0.23□□□□□ -2.37
COL3A1P02461 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
COL3A1P02461 MIR6854-201ENST00000614935 69 ntBASIC0.23□□□□□ -2.37
COL3A1P02461 RNA5SP214-201ENST00000363378 118 ntBASIC0.22□□□□□ -2.37
COL3A1P02461 RNA5SP134-201ENST00000516492 96 ntBASIC0.22□□□□□ -2.37
COL3A1P02461 RNU6-1174P-201ENST00000517278 101 ntBASIC0.22□□□□□ -2.37
COL3A1P02461 RNU7-165P-201ENST00000458864 60 ntBASIC0.22□□□□□ -2.37
COL3A1P02461 RNU7-159P-201ENST00000459284 62 ntBASIC0.22□□□□□ -2.37
COL3A1P02461 AC104408.1-201ENST00000605241 170 ntBASIC0.22□□□□□ -2.37
COL3A1P02461 SNORD45.2-201ENST00000363552 72 ntBASIC0.21□□□□□ -2.38
COL3A1P02461 MIR145-201ENST00000384967 88 ntBASIC0.21□□□□□ -2.38
COL3A1P02461 RPS29P8-201ENST00000445109 171 ntBASIC0.21□□□□□ -2.38
COL3A1P02461 Y_RNA.69-201ENST00000362885 109 ntBASIC0.2□□□□□ -2.38
COL3A1P02461 RNU6-828P-201ENST00000364876 107 ntBASIC0.2□□□□□ -2.38
COL3A1P02461 MIR601-201ENST00000385256 79 ntBASIC0.2□□□□□ -2.38
COL3A1P02461 RNU6-46P-201ENST00000383860 107 ntBASIC0.19□□□□□ -2.38
COL3A1P02461 RNU6-1267P-201ENST00000410747 107 ntBASIC0.19□□□□□ -2.38
COL3A1P02461 U4.2-201ENST00000618561 85 ntBASIC0.19□□□□□ -2.38
COL3A1P02461 SNORD49B-201ENST00000365172 72 ntBASIC0.18□□□□□ -2.38
COL3A1P02461 MIR124-2-201ENST00000385081 109 ntBASIC0.18□□□□□ -2.38
COL3A1P02461 MIR5704-201ENST00000584029 77 ntBASIC0.18□□□□□ -2.38
COL3A1P02461 MIR101-1-201ENST00000362265 75 ntBASIC0.17□□□□□ -2.38
COL3A1P02461 SNORA42.1-201ENST00000363515 137 ntBASIC0.17□□□□□ -2.38
COL3A1P02461 SNORD114-9-201ENST00000364370 72 ntBASIC0.17□□□□□ -2.38
COL3A1P02461 RNU6-930P-201ENST00000390938 100 ntBASIC0.17□□□□□ -2.38
COL3A1P02461 MIR548AX-201ENST00000580117 73 ntBASIC0.17□□□□□ -2.38
COL3A1P02461 MIR8068-201ENST00000618032 68 ntBASIC0.17□□□□□ -2.38
COL3A1P02461 MIR125B1-201ENST00000385236 88 ntBASIC0.16□□□□□ -2.38
COL3A1P02461 AC244250.2-201ENST00000418731 148 ntBASIC0.16□□□□□ -2.38
COL3A1P02461 MIR4768-201ENST00000585270 74 ntBASIC0.16□□□□□ -2.38
COL3A1P02461 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.16□□□□□ -2.38
COL3A1P02461 RNU6-838P-201ENST00000363399 108 ntBASIC0.16□□□□□ -2.38
COL3A1P02461 SNORD56B-201ENST00000384713 71 ntBASIC0.15□□□□□ -2.39
COL3A1P02461 AL451105.1-201ENST00000450005 189 ntBASIC0.15□□□□□ -2.39
COL3A1P02461 AC114755.3-201ENST00000481111 251 ntBASIC0.15□□□□□ -2.39
COL3A1P02461 RNU6-1238P-201ENST00000517215 102 ntBASIC0.15□□□□□ -2.39
COL3A1P02461 MIR4280-201ENST00000582178 76 ntBASIC0.15□□□□□ -2.39
COL3A1P02461 MIR371B-201ENST00000638082 66 ntBASIC0.15□□□□□ -2.39
COL3A1P02461 MIR655-201ENST00000362159 97 ntBASIC0.14□□□□□ -2.39
COL3A1P02461 RNU6-247P-201ENST00000362636 107 ntBASIC0.14□□□□□ -2.39
COL3A1P02461 SNORD74.6-201ENST00000364796 70 ntBASIC0.14□□□□□ -2.39
COL3A1P02461 MIR4667-201ENST00000578933 66 ntBASIC0.14□□□□□ -2.39
COL3A1P02461 MIR198-201ENST00000637333 62 ntBASIC0.14□□□□□ -2.39
COL3A1P02461 Y_RNA.413-201ENST00000384007 102 ntBASIC0.13□□□□□ -2.39
COL3A1P02461 MIR548Q-201ENST00000408404 100 ntBASIC0.13□□□□□ -2.39
COL3A1P02461 Y_RNA.754-201ENST00000476024 102 ntBASIC0.13□□□□□ -2.39
COL3A1P02461 MIR3170-201ENST00000582699 77 ntBASIC0.13□□□□□ -2.39
COL3A1P02461 Y_RNA.790-201ENST00000614282 102 ntBASIC0.13□□□□□ -2.39
COL3A1P02461 Y_RNA.782-201ENST00000614695 102 ntBASIC0.13□□□□□ -2.39
COL3A1P02461 Y_RNA.321-201ENST00000365149 102 ntBASIC0.12□□□□□ -2.39
COL3A1P02461 MIR224-201ENST00000384889 81 ntBASIC0.12□□□□□ -2.39
COL3A1P02461 RNU6-1111P-201ENST00000391118 107 ntBASIC0.12□□□□□ -2.39
COL3A1P02461 AL445193.1-201ENST00000441183 141 ntBASIC0.12□□□□□ -2.39
COL3A1P02461 RNU6-732P-201ENST00000516033 103 ntBASIC0.12□□□□□ -2.39
COL3A1P02461 SNORD114-5-201ENST00000362928 70 ntBASIC0.11□□□□□ -2.39
COL3A1P02461 Y_RNA.139-201ENST00000363464 102 ntBASIC0.11□□□□□ -2.39
COL3A1P02461 Y_RNA.514-201ENST00000384528 112 ntBASIC0.11□□□□□ -2.39
COL3A1P02461 SNORD18.2-201ENST00000459604 70 ntBASIC0.11□□□□□ -2.39
COL3A1P02461 MIR4645-201ENST00000583158 77 ntBASIC0.11□□□□□ -2.39
COL3A1P02461 RNU6-929P-201ENST00000384429 107 ntBASIC0.1□□□□□ -2.39
COL3A1P02461 MIR548F3-201ENST00000408509 87 ntBASIC0.1□□□□□ -2.39
COL3A1P02461 RNA5SP451-201ENST00000410588 110 ntBASIC0.1□□□□□ -2.39
COL3A1P02461 MIR4263-201ENST00000584745 83 ntBASIC0.1□□□□□ -2.39
COL3A1P02461 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.1□□□□□ -2.39
COL3A1P02461 RNU6-1233P-201ENST00000362922 102 ntBASIC0.1□□□□□ -2.39
COL3A1P02461 SNORD114-3-201ENST00000364969 75 ntBASIC0.1□□□□□ -2.39
COL3A1P02461 SNORD63.2-201ENST00000516303 64 ntBASIC0.1□□□□□ -2.39
COL3A1P02461 MIR1295B-201ENST00000636144 60 ntBASIC0.1□□□□□ -2.39
COL3A1P02461 Y_RNA.468-201ENST00000384298 102 ntBASIC0.09□□□□□ -2.4
COL3A1P02461 MIR518B-201ENST00000385127 83 ntBASIC0.09□□□□□ -2.4
COL3A1P02461 RNA5SP66-201ENST00000517178 101 ntBASIC0.09□□□□□ -2.4
COL3A1P02461 MIR6851-201ENST00000617060 67 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms