Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 SNORA40.16-201ENST00000517238 121 ntBASIC-0.03□□□□□ -2.41
LDLRP01130 AP001180.6-201ENST00000584918 159 ntBASIC-0.03□□□□□ -2.41
LDLRP01130 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.04□□□□□ -2.42
LDLRP01130 MIR124-2-201ENST00000385081 109 ntBASIC-0.04□□□□□ -2.42
LDLRP01130 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
LDLRP01130 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.04□□□□□ -2.42
LDLRP01130 MIR7110-201ENST00000612638 86 ntBASIC-0.04□□□□□ -2.42
LDLRP01130 MIR6851-201ENST00000617060 67 ntBASIC-0.04□□□□□ -2.42
LDLRP01130 RNA5SP368-201ENST00000364298 116 ntBASIC-0.05□□□□□ -2.42
LDLRP01130 SNORD114-12-201ENST00000365400 75 ntBASIC-0.05□□□□□ -2.42
LDLRP01130 RNU6-30P-201ENST00000384561 107 ntBASIC-0.05□□□□□ -2.42
LDLRP01130 RNU6-520P-201ENST00000384717 104 ntBASIC-0.05□□□□□ -2.42
LDLRP01130 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
LDLRP01130 RNU6-696P-201ENST00000390834 107 ntBASIC-0.05□□□□□ -2.42
LDLRP01130 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.05□□□□□ -2.42
LDLRP01130 MIR429-201ENST00000362106 83 ntBASIC-0.06□□□□□ -2.42
LDLRP01130 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.06□□□□□ -2.42
LDLRP01130 SNORA18.1-201ENST00000363418 128 ntBASIC-0.06□□□□□ -2.42
LDLRP01130 RNU6-810P-201ENST00000364001 107 ntBASIC-0.06□□□□□ -2.42
LDLRP01130 MIR604-201ENST00000384880 94 ntBASIC-0.06□□□□□ -2.42
LDLRP01130 SNORD116.2-201ENST00000391251 93 ntBASIC-0.06□□□□□ -2.42
LDLRP01130 MTND4LP19-201ENST00000403051 166 ntBASIC-0.06□□□□□ -2.42
LDLRP01130 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.06□□□□□ -2.42
LDLRP01130 AC104692.1-201ENST00000472406 90 ntBASIC-0.06□□□□□ -2.42
LDLRP01130 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.06□□□□□ -2.42
LDLRP01130 RNU6-924P-201ENST00000362926 108 ntBASIC-0.07□□□□□ -2.42
LDLRP01130 RNA5SP331-201ENST00000364986 107 ntBASIC-0.07□□□□□ -2.42
LDLRP01130 SNORD57-201ENST00000448188 72 ntBASIC-0.07□□□□□ -2.42
LDLRP01130 RNU7-119P-201ENST00000459279 63 ntBASIC-0.07□□□□□ -2.42
LDLRP01130 RNA5SP66-201ENST00000517178 101 ntBASIC-0.07□□□□□ -2.42
LDLRP01130 MIR7978-201ENST00000636158 59 ntBASIC-0.07□□□□□ -2.42
LDLRP01130 SNORA32.1-201ENST00000364514 115 ntBASIC-0.08□□□□□ -2.42
LDLRP01130 MIR579-201ENST00000385221 98 ntBASIC-0.08□□□□□ -2.42
LDLRP01130 RNU7-151P-201ENST00000516930 53 ntBASIC-0.08□□□□□ -2.42
LDLRP01130 MIR4490-201ENST00000582647 84 ntBASIC-0.08□□□□□ -2.42
LDLRP01130 SNORA40B-201ENST00000385573 128 ntBASIC-0.09□□□□□ -2.42
LDLRP01130 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
LDLRP01130 SNORD19-201ENST00000391191 68 ntBASIC-0.09□□□□□ -2.42
LDLRP01130 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.09□□□□□ -2.42
LDLRP01130 SNORD4A-201ENST00000459174 72 ntBASIC-0.09□□□□□ -2.42
LDLRP01130 RNA5SP169-201ENST00000517268 117 ntBASIC-0.09□□□□□ -2.42
LDLRP01130 MIR3666-201ENST00000607845 111 ntBASIC-0.09□□□□□ -2.42
LDLRP01130 MIR1295B-201ENST00000636144 60 ntBASIC-0.09□□□□□ -2.42
LDLRP01130 SNORD114-11-201ENST00000363738 75 ntBASIC-0.1□□□□□ -2.43
LDLRP01130 MIR214-201ENST00000385214 110 ntBASIC-0.1□□□□□ -2.43
LDLRP01130 RNU6-732P-201ENST00000516033 103 ntBASIC-0.1□□□□□ -2.43
LDLRP01130 SNORD95.1-201ENST00000364099 68 ntBASIC-0.11□□□□□ -2.43
LDLRP01130 RNU6-614P-201ENST00000384369 107 ntBASIC-0.11□□□□□ -2.43
LDLRP01130 MIR548AA1-201ENST00000384971 97 ntBASIC-0.11□□□□□ -2.43
LDLRP01130 RNA5SP300-201ENST00000391197 107 ntBASIC-0.11□□□□□ -2.43
LDLRP01130 SNORD22.1-201ENST00000516331 125 ntBASIC-0.11□□□□□ -2.43
LDLRP01130 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.11□□□□□ -2.43
LDLRP01130 U6.59-201ENST00000615686 107 ntBASIC-0.11□□□□□ -2.43
LDLRP01130 AC093726.3-201ENST00000637588 150 ntBASIC-0.11□□□□□ -2.43
LDLRP01130 MIR101-1-201ENST00000362265 75 ntBASIC-0.12□□□□□ -2.43
LDLRP01130 SNORD74.6-201ENST00000364796 70 ntBASIC-0.12□□□□□ -2.43
LDLRP01130 MIR125B1-201ENST00000385236 88 ntBASIC-0.12□□□□□ -2.43
LDLRP01130 SNORD63.1-201ENST00000516178 80 ntBASIC-0.12□□□□□ -2.43
LDLRP01130 AP002795.1-201ENST00000534879 84 ntBASIC-0.12□□□□□ -2.43
LDLRP01130 MIR4645-201ENST00000583158 77 ntBASIC-0.12□□□□□ -2.43
LDLRP01130 MIR4263-201ENST00000584745 83 ntBASIC-0.12□□□□□ -2.43
LDLRP01130 MIR4788-201ENST00000639104 80 ntBASIC-0.12□□□□□ -2.43
LDLRP01130 MIR518B-201ENST00000385127 83 ntBASIC-0.13□□□□□ -2.43
LDLRP01130 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.13□□□□□ -2.43
LDLRP01130 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.14□□□□□ -2.43
LDLRP01130 RNU6-721P-201ENST00000410155 105 ntBASIC-0.14□□□□□ -2.43
LDLRP01130 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.14□□□□□ -2.43
LDLRP01130 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.15□□□□□ -2.43
LDLRP01130 RNU6-974P-201ENST00000384099 108 ntBASIC-0.15□□□□□ -2.43
LDLRP01130 RNU6-987P-201ENST00000384759 104 ntBASIC-0.15□□□□□ -2.43
LDLRP01130 RNU4-37P-201ENST00000410214 84 ntBASIC-0.15□□□□□ -2.43
LDLRP01130 SNORD18.2-201ENST00000459604 70 ntBASIC-0.15□□□□□ -2.43
LDLRP01130 RNU7-160P-201ENST00000516660 62 ntBASIC-0.15□□□□□ -2.43
LDLRP01130 RNU6-980P-201ENST00000516925 103 ntBASIC-0.15□□□□□ -2.43
LDLRP01130 MIR3170-201ENST00000582699 77 ntBASIC-0.15□□□□□ -2.43
LDLRP01130 MIR409-201ENST00000362237 79 ntBASIC-0.16□□□□□ -2.44
LDLRP01130 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.16□□□□□ -2.44
LDLRP01130 MIR520D-201ENST00000385002 87 ntBASIC-0.16□□□□□ -2.44
LDLRP01130 SNORD75.1-201ENST00000408373 60 ntBASIC-0.16□□□□□ -2.44
LDLRP01130 SNORA26.4-201ENST00000391188 123 ntBASIC-0.17□□□□□ -2.44
LDLRP01130 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.17□□□□□ -2.44
LDLRP01130 MIR3179-1-201ENST00000578940 84 ntBASIC-0.17□□□□□ -2.44
LDLRP01130 MIR3179-2-201ENST00000579107 84 ntBASIC-0.17□□□□□ -2.44
LDLRP01130 MIR3179-3-201ENST00000579566 84 ntBASIC-0.17□□□□□ -2.44
LDLRP01130 MIR3179-4-201ENST00000617599 84 ntBASIC-0.17□□□□□ -2.44
LDLRP01130 RNU6-936P-201ENST00000384005 107 ntBASIC-0.18□□□□□ -2.44
LDLRP01130 RNU6-995P-201ENST00000391244 107 ntBASIC-0.18□□□□□ -2.44
LDLRP01130 AP000533.3-201ENST00000447704 118 ntBASIC-0.18□□□□□ -2.44
LDLRP01130 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.18□□□□□ -2.44
LDLRP01130 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.18□□□□□ -2.44
LDLRP01130 RNU6-419P-201ENST00000517030 63 ntBASIC-0.18□□□□□ -2.44
LDLRP01130 MIR548X-201ENST00000580069 75 ntBASIC-0.18□□□□□ -2.44
LDLRP01130 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.19□□□□□ -2.44
LDLRP01130 SNORD114-28-201ENST00000363610 72 ntBASIC-0.19□□□□□ -2.44
LDLRP01130 MIR204-201ENST00000385200 110 ntBASIC-0.19□□□□□ -2.44
LDLRP01130 RNU6-258P-201ENST00000390884 101 ntBASIC-0.19□□□□□ -2.44
LDLRP01130 SNORD114-17-201ENST00000364699 75 ntBASIC-0.2□□□□□ -2.44
LDLRP01130 MIR196A2-201ENST00000385189 110 ntBASIC-0.2□□□□□ -2.44
LDLRP01130 RPS29P8-201ENST00000445109 171 ntBASIC-0.2□□□□□ -2.44
LDLRP01130 SNORA13-201ENST00000458790 133 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms